Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_T7_M08
         (793 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    25   1.1  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    25   1.1  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   7.5  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   9.9  

>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -1

Query: 535 ISPFSYGLVVKQVYDSGTIFAP 470
           ISP + GLV + +  SGT+ AP
Sbjct: 264 ISPVTRGLVRRGILQSGTLNAP 285


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -1

Query: 535 ISPFSYGLVVKQVYDSGTIFAP 470
           ISP + GLV + +  SGT+ AP
Sbjct: 264 ISPVTRGLVRRGILQSGTLNAP 285


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 11/34 (32%), Positives = 14/34 (41%)
 Frame = +3

Query: 615 FNSTFEILVGIXRAWKKXVFSGPXPVLWAGMTTD 716
           F + +  L      WK     GP PV + G T D
Sbjct: 15  FLALYYYLTSTFDFWKSRGVVGPKPVPFFGTTKD 48


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +3

Query: 582 TGLQDVYIVDDFN 620
           TG+ D+++ DD N
Sbjct: 114 TGISDLFVFDDLN 126


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,709
Number of Sequences: 438
Number of extensions: 3388
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25003662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)