Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_M05
(835 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 32 0.58
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 31 1.3
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 31 1.3
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 30 1.8
AF100656-3|AAF99968.1| 265|Caenorhabditis elegans Hypothetical ... 30 2.3
AL132860-19|CAB60502.1| 159|Caenorhabditis elegans Hypothetical... 29 3.1
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 29 3.1
Z74043-7|CAA98539.2| 705|Caenorhabditis elegans Hypothetical pr... 28 7.2
U41032-4|AAO44918.2| 1130|Caenorhabditis elegans Protein kinase ... 28 7.2
U41032-3|AAO44917.1| 1237|Caenorhabditis elegans Protein kinase ... 28 7.2
Z70213-6|CAA94176.1| 167|Caenorhabditis elegans Hypothetical pr... 28 9.5
U97592-5|AAB52873.1| 597|Caenorhabditis elegans Hypothetical pr... 28 9.5
U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical pr... 28 9.5
AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical... 28 9.5
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical... 28 9.5
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 31.9 bits (69), Expect = 0.58
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = -1
Query: 703 PSPAISGTSTRSSNPXFHTPTTPDLTSISINPLTP--Y*KEFAPGLKPPLSSEAPSAYLT 530
P+P + T+T +NP TPTT + +I +P P + P S+ AP+A +
Sbjct: 490 PTPVPTTTNTPPANPTTATPTT--VGTIGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVN 547
Query: 529 PSSLGMAKGVSP 494
P+S A V P
Sbjct: 548 PTSPTTAPTVPP 559
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 30.7 bits (66), Expect = 1.3
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = -1
Query: 706 PPSPAISGTS-TRSSNPXFHTPTTPDL--TSISINPLTPY*KEFAPGLKPPLSSEAPSAY 536
P SP+ S TS + S ++PT+P TS S +P +P +P P S +PS+
Sbjct: 1607 PVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSP 1666
Query: 535 LTPSSLGMAKGVSPPY 488
S SP Y
Sbjct: 1667 SYSPSSPRYSPTSPTY 1682
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 30.7 bits (66), Expect = 1.3
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = -1
Query: 706 PPSPAISGTS-TRSSNPXFHTPTTPDL--TSISINPLTPY*KEFAPGLKPPLSSEAPSAY 536
P SP+ S TS + S ++PT+P TS S +P +P +P P S +PS+
Sbjct: 1614 PVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSP 1673
Query: 535 LTPSSLGMAKGVSPPY 488
S SP Y
Sbjct: 1674 SYSPSSPRYSPTSPTY 1689
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/71 (26%), Positives = 31/71 (43%)
Frame = -1
Query: 703 PSPAISGTSTRSSNPXFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPS 524
P+P + T+T +NP TPTT TS N ++P+ + + AP +P+
Sbjct: 490 PTPVPTTTNTPPANPTTATPTTVG-TSKQTNTISPHLSTITGSIVTSTPTMAPQTSASPT 548
Query: 523 SLGMAKGVSPP 491
+ S P
Sbjct: 549 TTPTHTTASQP 559
>AF100656-3|AAF99968.1| 265|Caenorhabditis elegans Hypothetical
protein F49F1.1 protein.
Length = 265
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Frame = -1
Query: 724 SPLC---IKPPSPAISGTSTRSSN--PXFHTPTTPDLTSISINPLTPY*KEFAPGLKPPL 560
SP C +K PA G+ + + P T TP+LT++++ P+T K + P
Sbjct: 148 SPPCSDDVKIFCPATCGSCSNGTTGVPLVLTTLTPELTTVTVEPITSTLKPTTTTITPTT 207
Query: 559 SSEAPS 542
+++ P+
Sbjct: 208 TTKLPT 213
>AL132860-19|CAB60502.1| 159|Caenorhabditis elegans Hypothetical
protein Y56A3A.21 protein.
Length = 159
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -1
Query: 742 ALXLAVSPLCIKPPSPAISGTSTRSSNPXFHTPTT 638
AL L S LC K SP S +S +++ FH TT
Sbjct: 7 ALCLVASALCAKCESPKYSASSFSTTDGFFHYKTT 41
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 29.5 bits (63), Expect = 3.1
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Frame = -1
Query: 706 PPSPAISGTSTRSSNPXFHTPTTPDLTSISINPLTPY*KEFAP-GLKPPLSSEAPSAYLT 530
P S I+ TS+ S+ P + T T + + E ++ SS +PS + T
Sbjct: 695 PDSTIITSTSSTSTRPGTSSTATDSPTMDDTSKTSTVTSEGTTLSIESTESSASPSDFTT 754
Query: 529 PSSLGMAKGVSPPYFQVNDESQAS 458
P +G VS Q + S +S
Sbjct: 755 PDFIGFTSSVSRTSEQYSSSSPSS 778
>Z74043-7|CAA98539.2| 705|Caenorhabditis elegans Hypothetical
protein T19B10.5 protein.
Length = 705
Score = 28.3 bits (60), Expect = 7.2
Identities = 21/77 (27%), Positives = 33/77 (42%)
Frame = -1
Query: 784 QLKESMXWPPLNXXALXLAVSPLCIKPPSPAISGTSTRSSNPXFHTPTTPDLTSISINPL 605
+L++ PP + + SP+ PPSP +S ++ + T S P
Sbjct: 458 KLEQCTELPPKPRKMVSRSPSPVNKPPPSPKVSRATSPKKSQQVEDSTQTTQLSAETRP- 516
Query: 604 TPY*KEFAPGLKPPLSS 554
T K AP + PP+SS
Sbjct: 517 TQTEKPIAP-VPPPISS 532
>U41032-4|AAO44918.2| 1130|Caenorhabditis elegans Protein kinase
protein 25, isoformb protein.
Length = 1130
Score = 28.3 bits (60), Expect = 7.2
Identities = 22/99 (22%), Positives = 44/99 (44%), Gaps = 5/99 (5%)
Frame = -1
Query: 724 SPLCIKPPSPAISGTSTRSSNPXFHT----PTT-PDLTSISINPLTPY*KEFAPGLKPPL 560
+P+ +P P ++ +SS P + PT P T+ P+T + P PP+
Sbjct: 857 NPVETRPSQPHVTMPPKKSSEPILSSEVLQPTRLPSATTSQAKPVTQPIRH--PS--PPV 912
Query: 559 SSEAPSAYLTPSSLGMAKGVSPPYFQVNDESQASRLISG 443
++ P+A + + +G + P F + + S ++G
Sbjct: 913 ATVIPTAVVDKKPVSQNQGSNVPLFNITNSSNGYPQLNG 951
>U41032-3|AAO44917.1| 1237|Caenorhabditis elegans Protein kinase
protein 25, isoforma protein.
Length = 1237
Score = 28.3 bits (60), Expect = 7.2
Identities = 22/99 (22%), Positives = 44/99 (44%), Gaps = 5/99 (5%)
Frame = -1
Query: 724 SPLCIKPPSPAISGTSTRSSNPXFHT----PTT-PDLTSISINPLTPY*KEFAPGLKPPL 560
+P+ +P P ++ +SS P + PT P T+ P+T + P PP+
Sbjct: 964 NPVETRPSQPHVTMPPKKSSEPILSSEVLQPTRLPSATTSQAKPVTQPIRH--PS--PPV 1019
Query: 559 SSEAPSAYLTPSSLGMAKGVSPPYFQVNDESQASRLISG 443
++ P+A + + +G + P F + + S ++G
Sbjct: 1020 ATVIPTAVVDKKPVSQNQGSNVPLFNITNSSNGYPQLNG 1058
>Z70213-6|CAA94176.1| 167|Caenorhabditis elegans Hypothetical
protein ZK930.7 protein.
Length = 167
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 709 KPPSPAISGTSTRSSNPXFHTPTTPDLTSISINPLT 602
KPP+P+ T N + P++P T S PLT
Sbjct: 101 KPPAPSARTPPTIYENLAINAPSSPSATDASSVPLT 136
>U97592-5|AAB52873.1| 597|Caenorhabditis elegans Hypothetical
protein C14A11.6 protein.
Length = 597
Score = 27.9 bits (59), Expect = 9.5
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = -1
Query: 691 ISGTSTRSSNPXFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGM 512
+S +STR+++ + +TP T+ +I P P E + +K + E A P+ M
Sbjct: 528 LSHSSTRTADTIAASTSTPPSTTSNITPSRPTTSEQSNTIKRKTAFEKEDA--PPAKRSM 585
Query: 511 AKGVSPPYF 485
A YF
Sbjct: 586 ATSTDDAYF 594
>U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical protein
F40H6.5 protein.
Length = 1288
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = -1
Query: 727 VSPLCIKPPSPAISGTSTRSSNPXFHTPTTPDLTSISINPLT 602
VS C++PP+ + TST T TTP LT+ S P T
Sbjct: 1145 VSMACVRPPTTPTTTTSTT-------TTTTPKLTTTSTLPST 1179
>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
protein Y57A10A.18b protein.
Length = 1459
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -1
Query: 565 PLSSEAPSAYLTPSSLGMAKGVSPP 491
P+++EAP+A PS + +G SPP
Sbjct: 1203 PVAAEAPAAAAAPSRARVPRGPSPP 1227
>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
protein Y57A10A.18a protein.
Length = 1456
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -1
Query: 565 PLSSEAPSAYLTPSSLGMAKGVSPP 491
P+++EAP+A PS + +G SPP
Sbjct: 1203 PVAAEAPAAAAAPSRARVPRGPSPP 1227
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,946,190
Number of Sequences: 27780
Number of extensions: 345823
Number of successful extensions: 1147
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1143
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2072006206
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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