Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_M04
(798 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80840-12|AAB37925.1| 694|Caenorhabditis elegans Hypothetical p... 60 2e-09
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.025
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.025
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.025
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 34 0.14
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.31
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.31
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 32 0.55
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 31 0.96
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 31 1.3
U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protei... 30 1.7
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 2.2
AL031629-3|CAA20976.1| 555|Caenorhabditis elegans Hypothetical ... 30 2.2
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 2.2
Z83316-8|CAB54186.1| 409|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 29 2.9
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 29 2.9
Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 29 3.9
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 29 3.9
Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical p... 29 5.1
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 28 8.9
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 28 8.9
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 28 8.9
U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light c... 28 8.9
L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin l... 28 8.9
>U80840-12|AAB37925.1| 694|Caenorhabditis elegans Hypothetical
protein F08D12.1 protein.
Length = 694
Score = 59.7 bits (138), Expect = 2e-09
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Frame = -2
Query: 503 DQLETKIDIDALESSKWMMGAKVVKKTVQSKQEQSPGTPGSELGQXXXXXXXXXXKLPPN 324
+ +E +++D LE S W++ + ++ ++K Q+ + + LP N
Sbjct: 550 ETMEVDVNVDELEDSDWILYGEKYRQKKEAKSPQTAEIAATRKLKIATKRKRKIR-LPKN 608
Query: 323 ADLSKPPDPERWLPKYERTAY-RKRRGIRRDVIKGSQGMST 204
+ + PDPERWLP+ ER+ Y RKR+ R++ +G+QG S+
Sbjct: 609 YNSAVTPDPERWLPRQERSTYKRKRKNREREIGRGTQGSSS 649
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 36.3 bits (80), Expect = 0.025
Identities = 19/56 (33%), Positives = 21/56 (37%), Gaps = 5/56 (8%)
Frame = +2
Query: 593 GPXXPPPPXX--SLXAXXPXPXXPPAXCTXPGPXXXPG---XXVPPXSPXXXXVPL 745
GP PPPP + P P PP C P P PG PP P P+
Sbjct: 741 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPM 796
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 6/50 (12%)
Frame = +2
Query: 593 GPXXPPPP--XXSLXAXXPXP----XXPPAXCTXPGPXXXPGXXVPPXSP 724
GP PPPP + P P PP P P PG PP P
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 36.3 bits (80), Expect = 0.025
Identities = 19/56 (33%), Positives = 21/56 (37%), Gaps = 5/56 (8%)
Frame = +2
Query: 593 GPXXPPPPXX--SLXAXXPXPXXPPAXCTXPGPXXXPG---XXVPPXSPXXXXVPL 745
GP PPPP + P P PP C P P PG PP P P+
Sbjct: 741 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPM 796
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 6/50 (12%)
Frame = +2
Query: 593 GPXXPPPP--XXSLXAXXPXP----XXPPAXCTXPGPXXXPGXXVPPXSP 724
GP PPPP + P P PP P P PG PP P
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 36.3 bits (80), Expect = 0.025
Identities = 19/56 (33%), Positives = 21/56 (37%), Gaps = 5/56 (8%)
Frame = +2
Query: 593 GPXXPPPPXX--SLXAXXPXPXXPPAXCTXPGPXXXPG---XXVPPXSPXXXXVPL 745
GP PPPP + P P PP C P P PG PP P P+
Sbjct: 324 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPM 379
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 6/50 (12%)
Frame = +2
Query: 593 GPXXPPPP--XXSLXAXXPXP----XXPPAXCTXPGPXXXPGXXVPPXSP 724
GP PPPP + P P PP P P PG PP P
Sbjct: 308 GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 357
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 33.9 bits (74), Expect = 0.14
Identities = 18/53 (33%), Positives = 19/53 (35%), Gaps = 3/53 (5%)
Frame = +2
Query: 593 GPXXPPPPXXSLXAXXPXPXXPPAXCT---XPGPXXXPGXXVPPXSPXXXXVP 742
GP PPP + A P P PP C P P P PP P P
Sbjct: 26 GPPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPP 78
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 33.1 bits (72), Expect = 0.24
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = +2
Query: 593 GPXXPPPPXXSLXAXXPXPXXPPAXCTXPGPXXXPGXXVPPXSP 724
GP P S A P P PP PG PG PP +P
Sbjct: 245 GPAGPDGQSGSGSAGGPGPKGPPGPAGQPGSDGNPGTAGPPGNP 288
Score = 31.1 bits (67), Expect = 0.96
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +2
Query: 593 GPXXPPPPXXSLXAXX-PXPXXPPAXCTXPGPXXXPGXXVPP 715
GP PP P + P P PA + PGP PG PP
Sbjct: 168 GPPGPPGPDGTPGEPGGPGPAGSPAGPSGPGPAGPPGPAGPP 209
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.7 bits (71), Expect = 0.31
Identities = 17/40 (42%), Positives = 18/40 (45%)
Frame = +2
Query: 596 PXXPPPPXXSLXAXXPXPXXPPAXCTXPGPXXXPGXXVPP 715
P PPPP + P P PP T PGP PG PP
Sbjct: 285 PRPPPPPSSGMW---PPPPPPPPGRT-PGPPGMPGMPPPP 320
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/40 (32%), Positives = 14/40 (35%)
Frame = +2
Query: 605 PPPPXXSLXAXXPXPXXPPAXCTXPGPXXXPGXXVPPXSP 724
PPPP + P PP P P G PP P
Sbjct: 348 PPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPPP 387
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +2
Query: 593 GPXXPPPPXXSLXAXXPXPXXPPAXCTXPGPXXXPGXXVPPXSP 724
G PPPP P P P PG P PP P
Sbjct: 332 GMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPP 375
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/49 (30%), Positives = 15/49 (30%)
Frame = +2
Query: 596 PXXPPPPXXSLXAXXPXPXXPPAXCTXPGPXXXPGXXVPPXSPXXXXVP 742
P PPPP P P P P P G PP P P
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTP-GMTPRPPPPPSSGMWPPPPPPPPGRTP 308
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.7 bits (71), Expect = 0.31
Identities = 17/40 (42%), Positives = 18/40 (45%)
Frame = +2
Query: 596 PXXPPPPXXSLXAXXPXPXXPPAXCTXPGPXXXPGXXVPP 715
P PPPP + P P PP T PGP PG PP
Sbjct: 295 PRPPPPPSSGMW---PPPPPPPPGRT-PGPPGMPGMPPPP 330
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/40 (32%), Positives = 14/40 (35%)
Frame = +2
Query: 605 PPPPXXSLXAXXPXPXXPPAXCTXPGPXXXPGXXVPPXSP 724
PPPP + P PP P P G PP P
Sbjct: 358 PPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPPP 397
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +2
Query: 593 GPXXPPPPXXSLXAXXPXPXXPPAXCTXPGPXXXPGXXVPPXSP 724
G PPPP P P P PG P PP P
Sbjct: 342 GMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPP 385
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/49 (30%), Positives = 15/49 (30%)
Frame = +2
Query: 596 PXXPPPPXXSLXAXXPXPXXPPAXCTXPGPXXXPGXXVPPXSPXXXXVP 742
P PPPP P P P P P G PP P P
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTP-GMTPRPPPPPSSGMWPPPPPPPPGRTP 318
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 31.9 bits (69), Expect = 0.55
Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 3/44 (6%)
Frame = +2
Query: 593 GPXXPPPPXXSLXAXXPX---PXXPPAXCTXPGPXXXPGXXVPP 715
GP PP P + P P PP PGP PG PP
Sbjct: 232 GPAGPPGPDGASPTAAPGAAGPPGPPGPAGAPGPDGNPGTAGPP 275
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 31.1 bits (67), Expect = 0.96
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +2
Query: 596 PXXPPPPXXSLXAXXPXPXXPPAXCTXPGPXXXP 697
P PPPP S+ P P PP T P P
Sbjct: 69 PPPPPPPLISILQQAPPPPPPPPPPTLKAPPPPP 102
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = +2
Query: 569 TSRXXAARGPXXPPPPXXSLXAXXPXPXXPPAXCTXPGPXXXPGXXVPPXSP 724
TSR + P PPPP P P PP T VPP P
Sbjct: 1330 TSRSSSPSPPPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPP 1381
>U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protein
111 protein.
Length = 332
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = +2
Query: 587 ARGPXXPPPPXXSLXAXXPXPXXPPAXCTXPGPXXXPGXXVPPXSP 724
A GP PP P P PP PGP PG P P
Sbjct: 227 APGPVGPPGVAEEGPDGLPGPAGPPGKPGMPGPMGTPGGPGEPGIP 272
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = +2
Query: 596 PXXPPPPXXSLXAXXPXPXXPPAXCTXPGPXXXPGXXVPPXSP 724
P PPPP S P PP P P PP +P
Sbjct: 122 PPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTP 164
Score = 28.7 bits (61), Expect = 5.1
Identities = 22/76 (28%), Positives = 35/76 (46%)
Frame = -3
Query: 439 KSSRRLFKASRNNLPELPALSWDRRRKRNASATANSRRTQTSPNLPIRKGGCQSTSELRT 260
KSSR+ K S+ + E + S D R + S T +S GG STSE +
Sbjct: 675 KSSRKRSKKSKKS-NETSSSSSDERLIHSQSPPTPQNTTSSSDVSSSSSGGSASTSESSS 733
Query: 259 ESDEALDVTSSRVAKE 212
+ A V++ + +K+
Sbjct: 734 SAPSAEQVSTPKKSKK 749
>AL031629-3|CAA20976.1| 555|Caenorhabditis elegans Hypothetical
protein Y106G6D.3 protein.
Length = 555
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = -3
Query: 394 ELPALSWDRRRKRNASATANSRRT---QTSPNLPIRKGGCQSTSELRTESDEALDVTSSR 224
E A +W RRR+ +R+T + + +P +K S R+ + SSR
Sbjct: 247 EAEAPNWRRRRRAKEDQNVKARKTKKVKKNEEVPSKKSSKMSKRSKRSTDENLETAKSSR 306
Query: 223 VAKECPP 203
+ K+ P
Sbjct: 307 ILKDSEP 313
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +2
Query: 596 PXXPPPPXXSLXAXXPXPXXPPAXCTXPGPXXXPGXXVPPXS 721
P PP P A P P PP P P PG + P S
Sbjct: 563 PPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPPGGLMGPAS 604
>Z83316-8|CAB54186.1| 409|Caenorhabditis elegans Hypothetical
protein B0379.7 protein.
Length = 409
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = -3
Query: 445 ELKSSRRLFKASRNNLPELPALSWDRRRKRNASATANSRRTQTSPNLPIRKGGCQSTSEL 266
E K S+++ K +N + S R+ K+N + S T P + G Q+ +EL
Sbjct: 211 ESKKSKKI-KKKKNKKSKDKKKSNSRKNKKNKKSKGKSTSTSEPPTPNQPETGVQTANEL 269
Query: 265 RTESDEA 245
R ++ E+
Sbjct: 270 RNDAPES 276
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 3/44 (6%)
Frame = +2
Query: 593 GPXXPPPPXXSLXAXXPXPXX---PPAXCTXPGPXXXPGXXVPP 715
GP PPPP P PP T PGP P PP
Sbjct: 786 GPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGGPPPNMAPP 829
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +2
Query: 596 PXXPPPPXXSLXAXXPXPXXPPAXCTXPGPXXXPGXXVPPXSP 724
P PP P P PP PG PG PP P
Sbjct: 130 PGKPPQSPCEPLTPPPCPACPPGPPGAPGAPGKPGSEGPPGPP 172
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 3/44 (6%)
Frame = +2
Query: 593 GPXXPPPPXXSLXAXXPXPXX---PPAXCTXPGPXXXPGXXVPP 715
GP PPPP P PP T PGP P PP
Sbjct: 786 GPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGGPPPNMAPP 829
>Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical
protein C15A11.1 protein.
Length = 303
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +2
Query: 593 GPXXPPPPXXSLXAXXPXPXXPPAXCTXPGPXXXPGXXVPPXSP 724
GP PP P P PP PGP G P +P
Sbjct: 186 GPAGPPGPAGPAGEDAAAPESPPGPPGPPGPPGKDGEAGAPGAP 229
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = +2
Query: 584 AARGPXXPPPPXXSLXAXXPXPXXPPAXCTXPGPXXXPGXXVPPXSPXXXXVP 742
AA GP PP P P P PGP G P +P P
Sbjct: 222 AAPGPAGPPGPAGPPGPDGASPTAAPGAAGPPGPPGPAGAPGPDGNPGTAGPP 274
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/45 (33%), Positives = 15/45 (33%), Gaps = 2/45 (4%)
Frame = +2
Query: 596 PXXPPP--PXXSLXAXXPXPXXPPAXCTXPGPXXXPGXXVPPXSP 724
P PPP P P P PP PG PG P P
Sbjct: 139 PITPPPWKPCPQGPPGPPGPPGPPGDSGEPGSPGLPGQDAAPGEP 183
>Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical
protein F33A8.9 protein.
Length = 346
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = +2
Query: 584 AARGPXXPPPPXXSLXAXXPXPXXPPAXCTXPGPXXXPGXXVPPXSP 724
A GP PP P P P P GP PG PP +P
Sbjct: 205 ARSGPPGPPGPKGPRGT--PGPTGPKNFYITSGPPGPPGPPGPPGNP 249
>Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical
protein F47B8.13 protein.
Length = 245
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +2
Query: 605 PPPPXXSLXAXXPXPXXPPAXCTXPGPXXXPGXXVPPXSP 724
PPPP + A P P PA P P G +P
Sbjct: 40 PPPPADAAPAPAPEPAPAPAPEAVPAPAADAGGYAAAAAP 79
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/49 (28%), Positives = 17/49 (34%)
Frame = +2
Query: 596 PXXPPPPXXSLXAXXPXPXXPPAXCTXPGPXXXPGXXVPPXSPXXXXVP 742
P PPPP S+ + P P PP P + P P P
Sbjct: 156 PPPPPPPPVSVPSSKPTPPPPPPAQQKPSSDREQFRTMRPLRPANDVKP 204
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +2
Query: 605 PPPPXXSLXAXXPXPXXPPAXCTXPGPXXXPGXXVPPXSP 724
PPPP + P P PA C P P PP P
Sbjct: 90 PPPPPPASPCCGPSPV--PAPCCPPPPAPAAPCCPPPPPP 127
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/42 (35%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Frame = +2
Query: 596 PXXPPPPXXSLXAXXPXPXXPPAXCTXPGP--XXXPGXXVPP 715
P PP P + P P PP PGP PG PP
Sbjct: 223 PSEPPSPGPVDPSDEPSPSDPPGPPGPPGPPTRRPPGPPGPP 264
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +2
Query: 596 PXXPPPPXXSLXAXXPXPXXPP 661
P PPPP S+ + P P PP
Sbjct: 156 PPPPPPPPVSVPSSKPTPPPPP 177
>U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light
chain protein 3, isoforma protein.
Length = 153
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -2
Query: 296 ERWLPKYERTAYRKRRGIRRDVIKG 222
E WLP YE+ A K +G D +G
Sbjct: 64 EEWLPMYEQLAKEKEQGTYADFYEG 88
>L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin
light chain protein.
Length = 153
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -2
Query: 296 ERWLPKYERTAYRKRRGIRRDVIKG 222
E WLP YE+ A K +G D +G
Sbjct: 64 EEWLPMYEQLAKEKEQGTYADFYEG 88
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,810,450
Number of Sequences: 27780
Number of extensions: 227498
Number of successful extensions: 1573
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1399
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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