Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_T7_M03
         (795 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ991915-1|ABJ09588.1| 2176|Drosophila melanogaster eyes shut pr...    29   5.5  
DQ780942-1|ABH07112.1| 2165|Drosophila melanogaster spacemaker p...    29   5.5  
AE014134-390|AAZ83988.1| 1984|Drosophila melanogaster CG33955-PB...    29   5.5  

>DQ991915-1|ABJ09588.1| 2176|Drosophila melanogaster eyes shut
            protein.
          Length = 2176

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 17/58 (29%), Positives = 26/58 (44%)
 Frame = -1

Query: 618  PSIPXTPX*KEFAPGLKPPLSSEAPSAYLTPSSXGMXKGVSPPYFQVNDESQASRLIS 445
            P+IP TP   + A  L PP S  A + Y TP          P   + ++E + +  +S
Sbjct: 948  PTIPPTPPSTQSAQTLPPPTS--AINVYTTPDGPPTASQTKPSVTESSEEVEGTNTVS 1003


>DQ780942-1|ABH07112.1| 2165|Drosophila melanogaster spacemaker
            protein.
          Length = 2165

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 17/58 (29%), Positives = 26/58 (44%)
 Frame = -1

Query: 618  PSIPXTPX*KEFAPGLKPPLSSEAPSAYLTPSSXGMXKGVSPPYFQVNDESQASRLIS 445
            P+IP TP   + A  L PP S  A + Y TP          P   + ++E + +  +S
Sbjct: 937  PTIPPTPPSTQSAQTLPPPTS--AINVYTTPDGPPTASQTKPSVTESSEEVEGTNTVS 992


>AE014134-390|AAZ83988.1| 1984|Drosophila melanogaster CG33955-PB
           protein.
          Length = 1984

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 17/58 (29%), Positives = 26/58 (44%)
 Frame = -1

Query: 618 PSIPXTPX*KEFAPGLKPPLSSEAPSAYLTPSSXGMXKGVSPPYFQVNDESQASRLIS 445
           P+IP TP   + A  L PP S  A + Y TP          P   + ++E + +  +S
Sbjct: 741 PTIPPTPPSTQSAQTLPPPTS--AINVYTTPDGPPTASQTKPSVTESSEEVEGTNTVS 796


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,853,914
Number of Sequences: 53049
Number of extensions: 557400
Number of successful extensions: 1585
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1585
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3695805360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)