Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_L22
(781 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical pr... 316 2e-86
U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical pr... 284 4e-77
U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation... 151 4e-37
AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determini... 151 4e-37
AC091125-4|AAK27888.1| 732|Caenorhabditis elegans Hypothetical ... 138 3e-33
Z81462-7|CAB03845.1| 1008|Caenorhabditis elegans Hypothetical pr... 132 3e-31
Z81457-12|CAB03819.1| 1008|Caenorhabditis elegans Hypothetical p... 132 3e-31
AF286900-1|AAG01333.1| 1008|Caenorhabditis elegans sex determini... 132 3e-31
Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical pr... 111 4e-25
AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex determina... 111 4e-25
AC132211-3|AAN01436.1| 330|Caenorhabditis elegans Hypothetical ... 78 8e-15
Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical pr... 35 0.057
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 32 0.53
AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical... 30 1.6
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 29 3.7
U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protei... 29 3.7
U50308-2|AAG24028.1| 791|Caenorhabditis elegans Hypothetical pr... 29 3.7
L11247-3|AAA28008.1| 278|Caenorhabditis elegans Collagen protei... 29 4.9
AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen prot... 29 4.9
Z93379-1|CAB07589.1| 218|Caenorhabditis elegans Hypothetical pr... 28 6.5
AC119287-2|AAM19064.2| 218|Caenorhabditis elegans Glutathione s... 28 6.5
U58755-13|AAB00702.1| 348|Caenorhabditis elegans Collagen prote... 28 8.6
>U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical protein
F56D2.6a protein.
Length = 739
Score = 316 bits (775), Expect = 2e-86
Identities = 139/184 (75%), Positives = 161/184 (87%)
Frame = -1
Query: 676 ITAMLSVPQCFRETKTKRGRAADEAKMRFAHIDGDHLTLLNVYHAFKQNMEDPHWCYDNF 497
ITAMLSVPQC+ R A DEAK RFAHIDGDHLTLLNVYH+FKQN EDP WCYDNF
Sbjct: 534 ITAMLSVPQCWVRPNEMRTEA-DEAKARFAHIDGDHLTLLNVYHSFKQNQEDPQWCYDNF 592
Query: 496 INYRSLKSGDNVRQQLSRIMDRFNLKRTSTEFTSKDYYINIRKALVNGFFMQVAHLERTG 317
INYR++K+ D VR QLSR+MD++NL+R ST+F S+DYY+NIRKALV GFFMQVAHLER+G
Sbjct: 593 INYRTMKTADTVRTQLSRVMDKYNLRRVSTDFKSRDYYLNIRKALVAGFFMQVAHLERSG 652
Query: 316 SYLTVKDNQVVQLHPSTCLDHKPDWVIYNEFVLTTKNYIRTVTDIKPEWLLKIAPQYYEL 137
Y+TVKDNQ+V LHPST LDHKP+W +YNEFVLTTKN+IRTVTD++PEWLL+IAPQYY+L
Sbjct: 653 HYVTVKDNQLVNLHPSTVLDHKPEWALYNEFVLTTKNFIRTVTDVRPEWLLQIAPQYYDL 712
Query: 136 GNFP 125
NFP
Sbjct: 713 DNFP 716
>U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical protein
F56D2.6b protein.
Length = 700
Score = 284 bits (697), Expect = 4e-77
Identities = 126/168 (75%), Positives = 146/168 (86%)
Frame = -1
Query: 676 ITAMLSVPQCFRETKTKRGRAADEAKMRFAHIDGDHLTLLNVYHAFKQNMEDPHWCYDNF 497
ITAMLSVPQC+ R A DEAK RFAHIDGDHLTLLNVYH+FKQN EDP WCYDNF
Sbjct: 534 ITAMLSVPQCWVRPNEMRTEA-DEAKARFAHIDGDHLTLLNVYHSFKQNQEDPQWCYDNF 592
Query: 496 INYRSLKSGDNVRQQLSRIMDRFNLKRTSTEFTSKDYYINIRKALVNGFFMQVAHLERTG 317
INYR++K+ D VR QLSR+MD++NL+R ST+F S+DYY+NIRKALV GFFMQVAHLER+G
Sbjct: 593 INYRTMKTADTVRTQLSRVMDKYNLRRVSTDFKSRDYYLNIRKALVAGFFMQVAHLERSG 652
Query: 316 SYLTVKDNQVVQLHPSTCLDHKPDWVIYNEFVLTTKNYIRTVTDIKPE 173
Y+TVKDNQ+V LHPST LDHKP+W +YNEFVLTTKN+IRTVTD++PE
Sbjct: 653 HYVTVKDNQLVNLHPSTVLDHKPEWALYNEFVLTTKNFIRTVTDVRPE 700
>U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation of
germline protein5 protein.
Length = 1200
Score = 151 bits (367), Expect = 4e-37
Identities = 75/183 (40%), Positives = 113/183 (61%), Gaps = 1/183 (0%)
Frame = -1
Query: 676 ITAMLSVPQCFRETKTKRGRAADEAKMRFAHIDGDHLTLLNVYHAFKQNMEDPHWCYDNF 497
I AML+V F K K+ A D+ K +F +GDHLTLL VY+++K + WC++NF
Sbjct: 983 IVAMLNVQNIFYRPKEKQDHA-DQKKAKFHQPEGDHLTLLAVYNSWKNHHFSQPWCFENF 1041
Query: 496 INYRSLKSGDNVRQQLSRIMDRFNLKRTSTEFTSKDYYINIRKALVNGFFMQVAHLERTG 317
I RS+K ++R+QL IMDR L S +D ++KA+ +GFF A +
Sbjct: 1042 IQVRSMKRAQDIRKQLLGIMDRHKLLMVS---CGRD-VSRVQKAICSGFFRNAAKRDPQE 1097
Query: 316 SYLTVKDNQVVQLHPST-CLDHKPDWVIYNEFVLTTKNYIRTVTDIKPEWLLKIAPQYYE 140
Y T+ D Q V +HPS+ C +P+WV+Y+E V+TTK Y+R VT I P+WL++ AP +++
Sbjct: 1098 GYRTLTDGQNVYIHPSSACFQQQPEWVVYHELVMTTKEYMREVTAIDPKWLVEFAPSFFK 1157
Query: 139 LGN 131
+G+
Sbjct: 1158 IGD 1160
>AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determining
protein MOG-5 protein.
Length = 1200
Score = 151 bits (367), Expect = 4e-37
Identities = 75/183 (40%), Positives = 113/183 (61%), Gaps = 1/183 (0%)
Frame = -1
Query: 676 ITAMLSVPQCFRETKTKRGRAADEAKMRFAHIDGDHLTLLNVYHAFKQNMEDPHWCYDNF 497
I AML+V F K K+ A D+ K +F +GDHLTLL VY+++K + WC++NF
Sbjct: 983 IVAMLNVQNIFYRPKEKQDHA-DQKKAKFHQPEGDHLTLLAVYNSWKNHHFSQPWCFENF 1041
Query: 496 INYRSLKSGDNVRQQLSRIMDRFNLKRTSTEFTSKDYYINIRKALVNGFFMQVAHLERTG 317
I RS+K ++R+QL IMDR L S +D ++KA+ +GFF A +
Sbjct: 1042 IQVRSMKRAQDIRKQLLGIMDRHKLLMVS---CGRD-VSRVQKAICSGFFRNAAKRDPQE 1097
Query: 316 SYLTVKDNQVVQLHPST-CLDHKPDWVIYNEFVLTTKNYIRTVTDIKPEWLLKIAPQYYE 140
Y T+ D Q V +HPS+ C +P+WV+Y+E V+TTK Y+R VT I P+WL++ AP +++
Sbjct: 1098 GYRTLTDGQNVYIHPSSACFQQQPEWVVYHELVMTTKEYMREVTAIDPKWLVEFAPSFFK 1157
Query: 139 LGN 131
+G+
Sbjct: 1158 IGD 1160
>AC091125-4|AAK27888.1| 732|Caenorhabditis elegans Hypothetical
protein Y67D2.6 protein.
Length = 732
Score = 138 bits (335), Expect = 3e-33
Identities = 73/184 (39%), Positives = 108/184 (58%), Gaps = 3/184 (1%)
Frame = -1
Query: 676 ITAMLSVPQCFRETKTKRGRAADEAKMRFAHIDGDHLTLLNVYHAFKQNMEDPHWCYDNF 497
I AM+ + F T ++ AD + +FA +GDH+T+LNV+ F +N WC D+F
Sbjct: 530 IVAMMQIQDVFI-TPYRQRHQADVIRKKFAVEEGDHMTMLNVFTKFVENGRSKKWCSDHF 588
Query: 496 INYRSLKSGDNVRQQLSRIMDRFNLKRTSTEFTSKDYYINIRKALVNGFFMQVAHLERTG 317
+NYR L DNVR QL R++ RF +++ S+ + NIR+ LV GFF Q A TG
Sbjct: 589 VNYRGLMRADNVRSQLVRLLKRFEIEKVSSRGLI-NCSENIRQCLVTGFFSQAAQYHYTG 647
Query: 316 SYLTVKDNQVVQLHPSTCLDHK---PDWVIYNEFVLTTKNYIRTVTDIKPEWLLKIAPQY 146
Y+TVK++ ++ + + K P WVI+ E + ++ IR VT I+PEWL ++AP Y
Sbjct: 648 KYMTVKESFPFNMYKGSSIMFKKDYPKWVIFTEVM---QDSIRDVTVIEPEWLYELAPHY 704
Query: 145 YELG 134
YE G
Sbjct: 705 YEFG 708
>Z81462-7|CAB03845.1| 1008|Caenorhabditis elegans Hypothetical protein
C04H5.6 protein.
Length = 1008
Score = 132 bits (319), Expect = 3e-31
Identities = 60/159 (37%), Positives = 99/159 (62%), Gaps = 1/159 (0%)
Frame = -1
Query: 613 ADEAKMRFAHIDGDHLTLLNVYHAFKQNMEDPHWCYDNFINYRSLKSGDNVRQQLSRIMD 434
AD A+ F GDH+TL+NVY+ ++++ WC +N++ +R++K +VR QL +++
Sbjct: 830 ADSARKGFWSPAGDHITLMNVYNKWQESSFSQRWCVENYVQHRTMKRARDVRDQLVGLLE 889
Query: 433 RFNLKRTSTEFTSKDYYINIRKALVNGFFMQVAHLERTGSYLTVKDNQVVQLHPSTCL-D 257
R ++ S+ T I IRKA+ G+F V+ L+ TG Y TVK HP++CL +
Sbjct: 890 RVEIETKSSTDT-----IKIRKAITAGYFYNVSKLDNTGHYKTVKHKHTTHPHPNSCLFE 944
Query: 256 HKPDWVIYNEFVLTTKNYIRTVTDIKPEWLLKIAPQYYE 140
P WV+Y E V T+K ++R +++I+ WLL++AP YY+
Sbjct: 945 ETPRWVVYFELVFTSKEFMREMSEIESGWLLEVAPHYYK 983
>Z81457-12|CAB03819.1| 1008|Caenorhabditis elegans Hypothetical
protein C04H5.6 protein.
Length = 1008
Score = 132 bits (319), Expect = 3e-31
Identities = 60/159 (37%), Positives = 99/159 (62%), Gaps = 1/159 (0%)
Frame = -1
Query: 613 ADEAKMRFAHIDGDHLTLLNVYHAFKQNMEDPHWCYDNFINYRSLKSGDNVRQQLSRIMD 434
AD A+ F GDH+TL+NVY+ ++++ WC +N++ +R++K +VR QL +++
Sbjct: 830 ADSARKGFWSPAGDHITLMNVYNKWQESSFSQRWCVENYVQHRTMKRARDVRDQLVGLLE 889
Query: 433 RFNLKRTSTEFTSKDYYINIRKALVNGFFMQVAHLERTGSYLTVKDNQVVQLHPSTCL-D 257
R ++ S+ T I IRKA+ G+F V+ L+ TG Y TVK HP++CL +
Sbjct: 890 RVEIETKSSTDT-----IKIRKAITAGYFYNVSKLDNTGHYKTVKHKHTTHPHPNSCLFE 944
Query: 256 HKPDWVIYNEFVLTTKNYIRTVTDIKPEWLLKIAPQYYE 140
P WV+Y E V T+K ++R +++I+ WLL++AP YY+
Sbjct: 945 ETPRWVVYFELVFTSKEFMREMSEIESGWLLEVAPHYYK 983
>AF286900-1|AAG01333.1| 1008|Caenorhabditis elegans sex determining
protein MOG-4 protein.
Length = 1008
Score = 132 bits (319), Expect = 3e-31
Identities = 60/159 (37%), Positives = 99/159 (62%), Gaps = 1/159 (0%)
Frame = -1
Query: 613 ADEAKMRFAHIDGDHLTLLNVYHAFKQNMEDPHWCYDNFINYRSLKSGDNVRQQLSRIMD 434
AD A+ F GDH+TL+NVY+ ++++ WC +N++ +R++K +VR QL +++
Sbjct: 830 ADSARKGFWSPAGDHITLMNVYNKWQESSFSQRWCVENYVQHRTMKRARDVRDQLVGLLE 889
Query: 433 RFNLKRTSTEFTSKDYYINIRKALVNGFFMQVAHLERTGSYLTVKDNQVVQLHPSTCL-D 257
R ++ S+ T I IRKA+ G+F V+ L+ TG Y TVK HP++CL +
Sbjct: 890 RVEIETKSSTDT-----IKIRKAITAGYFYNVSKLDNTGHYKTVKHKHTTHPHPNSCLFE 944
Query: 256 HKPDWVIYNEFVLTTKNYIRTVTDIKPEWLLKIAPQYYE 140
P WV+Y E V T+K ++R +++I+ WLL++AP YY+
Sbjct: 945 ETPRWVVYFELVFTSKEFMREMSEIESGWLLEVAPHYYK 983
>Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical protein
K03H1.2 protein.
Length = 1131
Score = 111 bits (268), Expect = 4e-25
Identities = 62/183 (33%), Positives = 96/183 (52%), Gaps = 3/183 (1%)
Frame = -1
Query: 676 ITAMLSVPQCFRETKTKRGRAADEAKMRFAHIDGDHLTLLNVYHAFKQNMEDPHWCYDNF 497
I +MLSVP F K R AD K +F + DHLT LNVY ++ + WC DN+
Sbjct: 884 IVSMLSVPAIFFRPKG-REEEADAKKEKFQVPESDHLTFLNVYIQWRTHKYSAKWCADNY 942
Query: 496 INYRSLKSGDNVRQQLSRIMDRFNLKRTSTEFTSKDYYINIRKALVNGFFMQVAHLERTG 317
++ ++LK VR QL IM L S ++ I +RK + + +F A L+ G
Sbjct: 943 LHVKALKKVREVRAQLKEIMQDLKLPLIS---NGSEWDI-VRKCICSAYFHNAARLKGIG 998
Query: 316 SYLTVKDNQVVQLHPSTCL---DHKPDWVIYNEFVLTTKNYIRTVTDIKPEWLLKIAPQY 146
Y+ V+ LHP++ L PD+V+Y+E ++T K Y++ VT + WL ++ P +
Sbjct: 999 EYVNVRTGIPCFLHPTSALFGMGFMPDYVVYHELIMTAKEYMQCVTAVDAIWLAELGPMF 1058
Query: 145 YEL 137
Y +
Sbjct: 1059 YSI 1061
>AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex determination
protein MOG-1 protein.
Length = 1131
Score = 111 bits (268), Expect = 4e-25
Identities = 62/183 (33%), Positives = 96/183 (52%), Gaps = 3/183 (1%)
Frame = -1
Query: 676 ITAMLSVPQCFRETKTKRGRAADEAKMRFAHIDGDHLTLLNVYHAFKQNMEDPHWCYDNF 497
I +MLSVP F K R AD K +F + DHLT LNVY ++ + WC DN+
Sbjct: 884 IVSMLSVPAIFFRPKG-REEEADAKKEKFQVPESDHLTFLNVYIQWRTHKYSAKWCADNY 942
Query: 496 INYRSLKSGDNVRQQLSRIMDRFNLKRTSTEFTSKDYYINIRKALVNGFFMQVAHLERTG 317
++ ++LK VR QL IM L S ++ I +RK + + +F A L+ G
Sbjct: 943 LHVKALKKVREVRAQLKEIMQDLKLPLIS---NGSEWDI-VRKCICSAYFHNAARLKGIG 998
Query: 316 SYLTVKDNQVVQLHPSTCL---DHKPDWVIYNEFVLTTKNYIRTVTDIKPEWLLKIAPQY 146
Y+ V+ LHP++ L PD+V+Y+E ++T K Y++ VT + WL ++ P +
Sbjct: 999 EYVNVRTGIPCFLHPTSALFGMGFMPDYVVYHELIMTAKEYMQCVTAVDAIWLAELGPMF 1058
Query: 145 YEL 137
Y +
Sbjct: 1059 YSI 1061
>AC132211-3|AAN01436.1| 330|Caenorhabditis elegans Hypothetical
protein Y108F1.5 protein.
Length = 330
Score = 77.8 bits (183), Expect = 8e-15
Identities = 37/100 (37%), Positives = 59/100 (59%), Gaps = 2/100 (2%)
Frame = -1
Query: 676 ITAMLSVPQCFRETKTKRGRAADEAKMRFAHIDGDHLTLLNVYHAFKQNMEDPHWCYDNF 497
I AM+ + F T ++ AD + +FA +G+H+T+LNV+ F +N WC D+F
Sbjct: 56 IVAMMQIQDVFI-TPYRQRHQADVIRKKFAVEEGNHITMLNVFTKFVENGRSKKWCSDHF 114
Query: 496 INYRSLKSGDNVRQQLSRIMDRFNLKRTST--EFTSKDYY 383
+NYR L DNVR QL R++ RF +++ S+ +T D +
Sbjct: 115 VNYRGLMRADNVRSQLVRLLKRFEIEKVSSRGHYTKVDIF 154
>Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical protein
F52B5.3 protein.
Length = 1425
Score = 35.1 bits (77), Expect = 0.057
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Frame = -1
Query: 607 EAKMRF--AHID-GDHLTLLNVYHAF--KQNMEDPHWCYDNFINYRSLKSGDNVRQQLSR 443
++KM+F A D DHL + + + F K N + +C D+F+N+ +++ R+QL R
Sbjct: 929 QSKMKFEMAQQDLSDHLLYIRLCNEFCSKNNSQQNQFCRDHFLNFSTMRMVQGTRRQLLR 988
Query: 442 IMDRFNL 422
+ R L
Sbjct: 989 ELVRAKL 995
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 31.9 bits (69), Expect = 0.53
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = -3
Query: 338 GAPREDGQLPDGEGQPGGTAAPLHVPGPQARLG 240
G P DGQ P G G PG A VPG Q G
Sbjct: 211 GGPGNDGQ-PGGPGNPGAPGAVTEVPGQQGPPG 242
>AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical
protein Y51H4A.9 protein.
Length = 351
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/34 (47%), Positives = 17/34 (50%)
Frame = -3
Query: 338 GAPREDGQLPDGEGQPGGTAAPLHVPGPQARLGH 237
GAP GQ+ D G P G A P PGP GH
Sbjct: 262 GAPGAPGQVVDVPGAP-GPAGPPGPPGPSGAPGH 294
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 6/41 (14%)
Frame = -3
Query: 341 GGAPREDGQL-----PDGE-GQPGGTAAPLHVPGPQARLGH 237
GG P + GQ P G+ GQPG +P PGP R GH
Sbjct: 192 GGRPGQAGQTRSAPSPPGQPGQPGEPGSPGE-PGPDGRAGH 231
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 6/41 (14%)
Frame = -3
Query: 341 GGAPREDGQL-----PDGE-GQPGGTAAPLHVPGPQARLGH 237
GG P + GQ P G+ GQPG +P PGP R GH
Sbjct: 192 GGRPGQAGQTRSAPSPPGQPGQPGEPGSPGE-PGPDGRAGH 231
>U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protein
139 protein.
Length = 310
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -3
Query: 338 GAPREDGQLPDGEGQPGGTAAPLHVPGPQARLG 240
G P DGQ P GQPG +++ PGP + G
Sbjct: 203 GQPGRDGQ-PGQAGQPGSSSSEPGQPGPNGQPG 234
>U50308-2|AAG24028.1| 791|Caenorhabditis elegans Hypothetical
protein F07C3.3 protein.
Length = 791
Score = 29.1 bits (62), Expect = 3.7
Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
Frame = -1
Query: 529 MEDPHWCYDNFINYRSLKS----GDNVRQQLSRIMDRFNLKRTSTEFTSKDYYINIRKAL 362
M+D + D + + L S G+ +R+Q+S+ +DR+++ + T++ ++
Sbjct: 270 MKDKNLPEDEILRVKDLYSYGDYGNKIREQVSKAVDRYSIDILGFDSTARTMFMRHMPRT 329
Query: 361 VNGFFMQVAHLERTGSYLTVKDNQVVQLHP 272
V M Y V DN +V L P
Sbjct: 330 VE--VMAKLDYHYLYGYTKVADNSMVNLAP 357
>L11247-3|AAA28008.1| 278|Caenorhabditis elegans Collagen protein
91 protein.
Length = 278
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/36 (47%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -3
Query: 344 AGGAPREDGQLPDGEGQPG-GTAAPLHVPGPQARLG 240
A GAP DGQ P GQ GT PGPQ +G
Sbjct: 183 APGAPGNDGQ-PGQNGQRSTGTPGAAGAPGPQGPVG 217
>AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen protein
101 protein.
Length = 314
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 5/41 (12%)
Frame = -3
Query: 338 GAPREDGQLPDGEGQPG-----GTAAPLHVPGPQARLGHIQ 231
GAP G + D G PG G A P PG + GH Q
Sbjct: 225 GAPGAPGHVVDVPGTPGPAGPPGPAGPAGAPGQPGQAGHAQ 265
>Z93379-1|CAB07589.1| 218|Caenorhabditis elegans Hypothetical
protein F21H7.1 protein.
Length = 218
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 365 TCKWIFHAGGAPREDGQLPDGEGQPG 288
+ + +FH GG P ED +LP PG
Sbjct: 17 SARMLFHLGGVPYEDVRLPTINAVPG 42
>AC119287-2|AAM19064.2| 218|Caenorhabditis elegans Glutathione
s-transferase protein35 protein.
Length = 218
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 359 KWIFHAGGAPREDGQLPDGEGQPG 288
+ +FH GG P ED ++P + PG
Sbjct: 19 RMLFHLGGVPFEDARMPTDDIVPG 42
>U58755-13|AAB00702.1| 348|Caenorhabditis elegans Collagen protein
113 protein.
Length = 348
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -3
Query: 338 GAPREDGQLP-DGEGQPGGTAAPLHVPGPQARLGHI 234
G P DGQ DGE P G + L +PG ++G +
Sbjct: 239 GYPGRDGQRGNDGESGPVGPSGQLGMPGEPGQIGMV 274
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,889,696
Number of Sequences: 27780
Number of extensions: 331406
Number of successful extensions: 1032
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 997
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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