Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_L17
(907 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 33 0.21
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.37
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.37
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.37
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 32 0.49
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 32 0.49
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 32 0.49
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 32 0.49
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 1.1
Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 2.0
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.0
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.0
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.0
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 2.6
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 30 2.6
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 30 2.6
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 2.6
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 30 2.6
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 30 2.6
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 30 2.6
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 2.6
Z68106-4|CAA92128.1| 112|Caenorhabditis elegans Hypothetical pr... 29 3.5
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 3.5
U41011-8|AAA82291.2| 321|Caenorhabditis elegans Collagen protei... 29 4.6
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 6.0
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 28 8.0
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 28 8.0
AC025716-19|AAK39602.2| 549|Caenorhabditis elegans Hypothetical... 28 8.0
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 33.5 bits (73), Expect = 0.21
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +2
Query: 554 PSPPFXSXPLXPXPXXXGPPPXXXXGXVSXXXPPXPPPP 670
P PP S L P P PPP P PPPP
Sbjct: 1343 PPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPP 1381
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +2
Query: 587 PXPXXXGPPPXXXXGXVSXXXPPXPPPP 670
P P PPP ++ PP PPPP
Sbjct: 1336 PSPPPPPPPPPPPSDDLTPVPPPPPPPP 1363
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +2
Query: 548 GXPSPPFXSXPLXPXPXXXGPPPXXXXGXVSXXXPPXPPPP 670
G P P S P P GPPP PP PPPP
Sbjct: 1572 GPPPPRGGSHCQGPPPLMGGPPPRL------GMPPPGPPPP 1606
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.7 bits (71), Expect = 0.37
Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 3/46 (6%)
Frame = +2
Query: 542 LLGXPSPPFXSXPLXPXPXXXGPPPXXXXGX---VSXXXPPXPPPP 670
+ G P PP P P GPPP G +S PP PPPP
Sbjct: 722 ITGGPPPP--PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +2
Query: 542 LLGXPSPPFXSXPLXPXPXXXGPPPXXXXGXVSXXXPPXPPPP 670
+ G P PP L P PPP G PP PPPP
Sbjct: 738 ITGGPPPPPPPGGLPPISGGPPPPPPPPGG---CPPPPPPPPP 777
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/52 (36%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = +2
Query: 542 LLGXPSPPFXSXPLXPXPXXXGPPPXXXXGXVS--XXXPPXPPPPXXXSXLS 691
+ G P PP P P P GPPP G + PP PPPP +S
Sbjct: 709 ITGGPPPP----PGLP-PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPIS 755
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 3/40 (7%)
Frame = +2
Query: 560 PPFXSXPLXPXPXXXG---PPPXXXXGXVSXXXPPXPPPP 670
PP P P P G PPP G PP PPPP
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG-PPPPPPP 790
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = +2
Query: 545 LGXPSPPFXSXPLXPXPXXXGPPPXXXXGXVSXXXPPXPPP 667
L PS P P GPPP ++ PP PPP
Sbjct: 693 LSAPSTSAGGSSALP-PITGGPPPPPGLPPITGGPPPPPPP 732
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.7 bits (71), Expect = 0.37
Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 3/46 (6%)
Frame = +2
Query: 542 LLGXPSPPFXSXPLXPXPXXXGPPPXXXXGX---VSXXXPPXPPPP 670
+ G P PP P P GPPP G +S PP PPPP
Sbjct: 722 ITGGPPPP--PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +2
Query: 542 LLGXPSPPFXSXPLXPXPXXXGPPPXXXXGXVSXXXPPXPPPP 670
+ G P PP L P PPP G PP PPPP
Sbjct: 738 ITGGPPPPPPPGGLPPISGGPPPPPPPPGG---CPPPPPPPPP 777
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/52 (36%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = +2
Query: 542 LLGXPSPPFXSXPLXPXPXXXGPPPXXXXGXVS--XXXPPXPPPPXXXSXLS 691
+ G P PP P P P GPPP G + PP PPPP +S
Sbjct: 709 ITGGPPPP----PGLP-PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPIS 755
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 3/40 (7%)
Frame = +2
Query: 560 PPFXSXPLXPXPXXXG---PPPXXXXGXVSXXXPPXPPPP 670
PP P P P G PPP G PP PPPP
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG-PPPPPPP 790
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = +2
Query: 545 LGXPSPPFXSXPLXPXPXXXGPPPXXXXGXVSXXXPPXPPP 667
L PS P P GPPP ++ PP PPP
Sbjct: 693 LSAPSTSAGGSSALP-PITGGPPPPPGLPPITGGPPPPPPP 732
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.7 bits (71), Expect = 0.37
Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 3/46 (6%)
Frame = +2
Query: 542 LLGXPSPPFXSXPLXPXPXXXGPPPXXXXGX---VSXXXPPXPPPP 670
+ G P PP P P GPPP G +S PP PPPP
Sbjct: 305 ITGGPPPP--PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 348
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +2
Query: 542 LLGXPSPPFXSXPLXPXPXXXGPPPXXXXGXVSXXXPPXPPPP 670
+ G P PP L P PPP G PP PPPP
Sbjct: 321 ITGGPPPPPPPGGLPPISGGPPPPPPPPGG---CPPPPPPPPP 360
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/52 (36%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = +2
Query: 542 LLGXPSPPFXSXPLXPXPXXXGPPPXXXXGXVS--XXXPPXPPPPXXXSXLS 691
+ G P PP P P P GPPP G + PP PPPP +S
Sbjct: 292 ITGGPPPP----PGLP-PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPIS 338
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 3/40 (7%)
Frame = +2
Query: 560 PPFXSXPLXPXPXXXG---PPPXXXXGXVSXXXPPXPPPP 670
PP P P P G PPP G PP PPPP
Sbjct: 335 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG-PPPPPPP 373
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = +2
Query: 545 LGXPSPPFXSXPLXPXPXXXGPPPXXXXGXVSXXXPPXPPP 667
L PS P P GPPP ++ PP PPP
Sbjct: 276 LSAPSTSAGGSSALP-PITGGPPPPPGLPPITGGPPPPPPP 315
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 32.3 bits (70), Expect = 0.49
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = -2
Query: 669 GGGGXGGXXXETXPXXXXGGGPXXXGXGXXGXDXNGGEG 553
GGGG GG P GGG G G G GG G
Sbjct: 101 GGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGG 139
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -2
Query: 669 GGGGXGGXXXETXPXXXXGGGPXXXGXGXXGXDXNGGEG 553
GGGG GG P GGG G G G G G
Sbjct: 44 GGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGG 82
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -2
Query: 669 GGGGXGGXXXETXPXXXXGGGPXXXGXGXXGXDXNGGEG 553
GGGG GG GGG G G G GG G
Sbjct: 68 GGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCG 106
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 32.3 bits (70), Expect = 0.49
Identities = 17/39 (43%), Positives = 17/39 (43%)
Frame = -2
Query: 669 GGGGXGGXXXETXPXXXXGGGPXXXGXGXXGXDXNGGEG 553
GGGG GG P GGP G G G D GG G
Sbjct: 225 GGGGWGGPAQRGGPGAY--GGPGGGGQGGYGGDYGGGWG 261
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 32.3 bits (70), Expect = 0.49
Identities = 17/39 (43%), Positives = 17/39 (43%)
Frame = -2
Query: 669 GGGGXGGXXXETXPXXXXGGGPXXXGXGXXGXDXNGGEG 553
GGGG GG P GGP G G G D GG G
Sbjct: 187 GGGGWGGPAQRGGPGAY--GGPGGGGQGGYGGDYGGGWG 223
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 32.3 bits (70), Expect = 0.49
Identities = 17/39 (43%), Positives = 17/39 (43%)
Frame = -2
Query: 669 GGGGXGGXXXETXPXXXXGGGPXXXGXGXXGXDXNGGEG 553
GGGG GG P GGP G G G D GG G
Sbjct: 225 GGGGWGGPAQRGGPGAY--GGPGGGGQGGYGGDYGGGWG 261
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +2
Query: 554 PSPPFXSXPLXPXPXXXGPPPXXXXGXVSXXXPPXPPPP 670
P PP + P P P PP PP PPPP
Sbjct: 33 PPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPP 71
>Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical
protein F15B9.10 protein.
Length = 373
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = -2
Query: 669 GGGGXGGXXXETXPXXXXGGGPXXXGXGXXGXDXNGGEG 553
GGGG GG GGG G D NGG+G
Sbjct: 315 GGGGGGGMGGGNRGYGYQGGGSNPSGQQGPVYDDNGGQG 353
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = +2
Query: 554 PSPPFXSXPLXPXPXXXG--PPPXXXXGXVSXXXPPXPPPP 670
P PP + + P P G PPP G PP PPPP
Sbjct: 85 PPPPMFAGGIPPPPPMMGGIPPPPPMFG-----APPPPPPP 120
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +2
Query: 548 GXPSPPFXSXPLXPXPXXXGPPPXXXXGXVSXXXPPXPPPPXXXS 682
G P PP P P PPP P PPPP S
Sbjct: 262 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS 306
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +2
Query: 548 GXPSPPFXSXPLXPXPXXXGPPPXXXXGXVSXXXPPXPPPPXXXS 682
G P PP P P PPP P PPPP S
Sbjct: 283 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS 327
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +2
Query: 548 GXPSPPFXSXPLXPXPXXXGPPPXXXXGXVSXXXPPXPPPPXXXS 682
G P PP P P PPP P PPPP S
Sbjct: 268 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS 312
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +2
Query: 554 PSPPFXSXPLXPXPXXXGPPPXXXXGXVSXXXPPXPPPP 670
P PP + P P G P S PP PPPP
Sbjct: 265 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPP 303
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 1/40 (2%)
Frame = +2
Query: 554 PSPPFXSXPLXPX-PXXXGPPPXXXXGXVSXXXPPXPPPP 670
P PP P P P PPP G P PPPP
Sbjct: 300 PPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPP 339
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 4/43 (9%)
Frame = +2
Query: 554 PSPPFXSXPLXPX----PXXXGPPPXXXXGXVSXXXPPXPPPP 670
P PP S + P P PPP V PP PPPP
Sbjct: 613 PPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPP 655
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +2
Query: 587 PXPXXXGPPPXXXXGXVSXXXPPXPPPP 670
P P PP +S PP PPPP
Sbjct: 609 PPPPPPPPPQSFGMAPISSAAPPPPPPP 636
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 4/43 (9%)
Frame = +2
Query: 554 PSPPFXSXPLXPX----PXXXGPPPXXXXGXVSXXXPPXPPPP 670
P PP S + P P PPP V PP PPPP
Sbjct: 439 PPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPP 481
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +2
Query: 587 PXPXXXGPPPXXXXGXVSXXXPPXPPPP 670
P P PP +S PP PPPP
Sbjct: 435 PPPPPPPPPQSFGMAPISSAAPPPPPPP 462
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +2
Query: 554 PSPPFXSXPLXPXPXXXGPPPXXXXGXVSXXXPPXPPPP 670
P PP + P P G P S PP PPPP
Sbjct: 275 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPP 313
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 1/40 (2%)
Frame = +2
Query: 554 PSPPFXSXPLXPX-PXXXGPPPXXXXGXVSXXXPPXPPPP 670
P PP P P P PPP G P PPPP
Sbjct: 310 PPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPP 349
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = +2
Query: 554 PSPPFXSXPLXPXPXXXGPPPXXXXGXVSXXXPPXPPPP 670
P+PP + P PPP + PP PPPP
Sbjct: 216 PAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPP 254
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +2
Query: 554 PSPPFXSXPLXPXPXXXGPPPXXXXGXVSXXXPPXPPPP 670
P PP PPP G + PP PPPP
Sbjct: 218 PPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPP 256
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = +2
Query: 554 PSPPFXSXPLXPXPXXXGPPPXXXXGXVSXXXPPXPPPP 670
P+PP + P PPP + PP PPPP
Sbjct: 202 PAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPP 240
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +2
Query: 554 PSPPFXSXPLXPXPXXXGPPPXXXXGXVSXXXPPXPPPP 670
P PP PPP G + PP PPPP
Sbjct: 204 PPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPP 242
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = +2
Query: 554 PSPPFXSXPLXPXPXXXGPPPXXXXGXVSXXXPPXPPPP 670
P+PP + P PPP + PP PPPP
Sbjct: 202 PAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPP 240
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +2
Query: 554 PSPPFXSXPLXPXPXXXGPPPXXXXGXVSXXXPPXPPPP 670
P PP PPP G + PP PPPP
Sbjct: 204 PPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPP 242
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = +2
Query: 554 PSPPFXSXPLXPXPXXXGPPPXXXXGXVSXXXPPXPPPP 670
P PP PL P PPP + PP PPPP
Sbjct: 559 PIPPPPPPPL-PQNLSGAPPPPPPPPPMLGGPPPPPPPP 596
>Z68106-4|CAA92128.1| 112|Caenorhabditis elegans Hypothetical
protein F41E7.5 protein.
Length = 112
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = -2
Query: 669 GGGGXGGXXXETXPXXXXGGGPXXXGXGXXGXDXNGGEG 553
GGGG GG + GG G G G NGG G
Sbjct: 33 GGGGFGGGPGQFGRGGFGGGPGSNYGPGRGGFGGNGGFG 71
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = +2
Query: 545 LGXPSPP-FXSXPLXPXPXXXGPPPXXXXGXVSXXXPPXPPPP 670
L P PP P P P GPPP + P PPPP
Sbjct: 704 LNAPPPPGIPGYPPAPPPPGVGPPPPQGIPPMG-FDPNKPPPP 745
>U41011-8|AAA82291.2| 321|Caenorhabditis elegans Collagen protein
114 protein.
Length = 321
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -2
Query: 669 GGGGXGGXXXETXPXXXXGGGPXXXGXGXXGXDXNGGEGXP 547
GGGG G E P GG G G NG G P
Sbjct: 94 GGGGGGEKYSEAPPVIEAAGGGSCGGCCPGGPGPNGKPGKP 134
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = +2
Query: 554 PSPPFXSXPLXPXPXXXGPPPXXXXGXVSXXXPPXPPPPXXXSXLS 691
PSP P P PPP S PP PPPP +S
Sbjct: 478 PSPQPAEVSKSPPP----PPPLPPIATPSSVPPPPPPPPALEQEIS 519
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = -2
Query: 669 GGGGXGGXXXETXPXXXXGGGPXXXGXGXXGXDXNGGEG 553
GGGG GG GGG G G + GG G
Sbjct: 787 GGGGGGGNGGSGGGGGGGGGGSGGSGGGGSNSNSGGGGG 825
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = -2
Query: 669 GGGGXGGXXXETXPXXXXGGGPXXXGXGXXGXDXNGG 559
GGGG GG GGG G G + NGG
Sbjct: 804 GGGGSGGSGGGGSNSNSGGGGGNGGGGNGGGGNGNGG 840
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -2
Query: 669 GGGGXGGXXXETXPXXXXGGGPXXXGXGXXGXDXNGGEG 553
GGGG GG P GGG G G G G G
Sbjct: 62 GGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGG 100
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -2
Query: 669 GGGGXGGXXXETXPXXXXGGGPXXXGXGXXGXDXNGGEG 553
GGGG GG P GGG G G G G G
Sbjct: 62 GGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGG 100
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -2
Query: 669 GGGGXGGXXXETXPXXXXGGGPXXXGXGXXGXDXNGG 559
GGGG GG GGG G G G GG
Sbjct: 59 GGGGGGGFGGGNGGFGGGGGGNYGGGGGNQGGGGGGG 95
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -2
Query: 669 GGGGXGGXXXETXPXXXXGGGPXXXGXGXXGXDXNGGEG 553
GGGG GG GG G G G GG G
Sbjct: 76 GGGGYGGGHGGAAVGGGYGGAVGGGGGGGYGGGHGGGHG 114
>AC025716-19|AAK39602.2| 549|Caenorhabditis elegans Hypothetical
protein Y39G10AR.17 protein.
Length = 549
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = +2
Query: 545 LGXPSPPFXSXPLXPXPXXXGPPPXXXXGXVSXXXPPXPPPP 670
+ P PP P+ P P P V PP PPPP
Sbjct: 312 MAVPPPPIPP-PIQPPPYSYYPVAPAAAPQVYHYAPPPPPPP 352
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,042,362
Number of Sequences: 27780
Number of extensions: 128893
Number of successful extensions: 1415
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1090
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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