Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_L15
(799 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M25772-1|AAA53372.1| 317|Drosophila melanogaster DNA repair pro... 190 3e-48
BT021447-1|AAX33595.1| 317|Drosophila melanogaster GH01513p pro... 190 3e-48
AY075528-1|AAL68335.1| 317|Drosophila melanogaster RE74511p pro... 190 3e-48
AE014296-3653|AAF51807.1| 317|Drosophila melanogaster CG7490-PA... 190 3e-48
X53286-1|CAA37380.1| 1023|Drosophila melanogaster glutactin prot... 30 4.2
X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein ( Dros... 30 4.2
AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependen... 30 4.2
AY069776-1|AAL39921.1| 1026|Drosophila melanogaster SD01663p pro... 30 4.2
AE014134-1548|AAF52697.1| 1026|Drosophila melanogaster CG9280-PC... 30 4.2
AE014134-1547|AAN10679.1| 1026|Drosophila melanogaster CG9280-PB... 30 4.2
AE014134-1546|AAN10678.1| 1026|Drosophila melanogaster CG9280-PA... 30 4.2
>M25772-1|AAA53372.1| 317|Drosophila melanogaster DNA repair
protein protein.
Length = 317
Score = 190 bits (462), Expect = 3e-48
Identities = 105/204 (51%), Positives = 120/204 (58%), Gaps = 1/204 (0%)
Frame = -1
Query: 751 GPLPHCQLSFPAHNTGXGPEKXXXSRLFXSLPRFQRVLLKSSTMYTS*SPVTKVGASEAT 572
G + + PA NTG GPEK + + + ++ P KVGASEAT
Sbjct: 114 GAIAPLHVIIPAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEAT 173
Query: 571 LLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPT 392
LLNMLNISPFSYGL+V QVYDSG+IF+PEILDIKPEDLRAKFQ GVAN+AA+ L++GYPT
Sbjct: 174 LLNMLNISPFSYGLIVNQVYDSGSIFSPEILDIKPEDLRAKFQQGVANLAAVCLSVGYPT 233
Query: 391 IASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXXXXXXXXXXXXXX 215
IASAPHSIANGFKNLL IKE+IKDPSKF
Sbjct: 234 IASAPHSIANGFKNLLAIAATTEVEFKEATTIKEYIKDPSKFAAAASASAAPAAGGATEK 293
Query: 214 XXXXXXXXXXXXXSDDDMGFGLFD 143
DDDMGFGLFD
Sbjct: 294 KEEAKKPESESEEEDDDMGFGLFD 317
>BT021447-1|AAX33595.1| 317|Drosophila melanogaster GH01513p
protein.
Length = 317
Score = 190 bits (462), Expect = 3e-48
Identities = 105/204 (51%), Positives = 120/204 (58%), Gaps = 1/204 (0%)
Frame = -1
Query: 751 GPLPHCQLSFPAHNTGXGPEKXXXSRLFXSLPRFQRVLLKSSTMYTS*SPVTKVGASEAT 572
G + + PA NTG GPEK + + + ++ P KVGASEAT
Sbjct: 114 GAIAPLHVIIPAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEAT 173
Query: 571 LLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPT 392
LLNMLNISPFSYGL+V QVYDSG+IF+PEILDIKPEDLRAKFQ GVAN+AA+ L++GYPT
Sbjct: 174 LLNMLNISPFSYGLIVNQVYDSGSIFSPEILDIKPEDLRAKFQQGVANLAAVCLSVGYPT 233
Query: 391 IASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXXXXXXXXXXXXXX 215
IASAPHSIANGFKNLL IKE+IKDPSKF
Sbjct: 234 IASAPHSIANGFKNLLAIAATTEVEFKEATTIKEYIKDPSKFAAAASASAAPAAGGATEK 293
Query: 214 XXXXXXXXXXXXXSDDDMGFGLFD 143
DDDMGFGLFD
Sbjct: 294 KEEAKKPESESEEEDDDMGFGLFD 317
>AY075528-1|AAL68335.1| 317|Drosophila melanogaster RE74511p
protein.
Length = 317
Score = 190 bits (462), Expect = 3e-48
Identities = 105/204 (51%), Positives = 120/204 (58%), Gaps = 1/204 (0%)
Frame = -1
Query: 751 GPLPHCQLSFPAHNTGXGPEKXXXSRLFXSLPRFQRVLLKSSTMYTS*SPVTKVGASEAT 572
G + + PA NTG GPEK + + + ++ P KVGASEAT
Sbjct: 114 GAIAPLHVIIPAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEAT 173
Query: 571 LLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPT 392
LLNMLNISPFSYGL+V QVYDSG+IF+PEILDIKPEDLRAKFQ GVAN+AA+ L++GYPT
Sbjct: 174 LLNMLNISPFSYGLIVNQVYDSGSIFSPEILDIKPEDLRAKFQQGVANLAAVCLSVGYPT 233
Query: 391 IASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXXXXXXXXXXXXXX 215
IASAPHSIANGFKNLL IKE+IKDPSKF
Sbjct: 234 IASAPHSIANGFKNLLAIAATTEVEFKEATTIKEYIKDPSKFAAAASASAAPAAGGATEK 293
Query: 214 XXXXXXXXXXXXXSDDDMGFGLFD 143
DDDMGFGLFD
Sbjct: 294 KEEAKKPESESEEEDDDMGFGLFD 317
>AE014296-3653|AAF51807.1| 317|Drosophila melanogaster CG7490-PA
protein.
Length = 317
Score = 190 bits (462), Expect = 3e-48
Identities = 105/204 (51%), Positives = 120/204 (58%), Gaps = 1/204 (0%)
Frame = -1
Query: 751 GPLPHCQLSFPAHNTGXGPEKXXXSRLFXSLPRFQRVLLKSSTMYTS*SPVTKVGASEAT 572
G + + PA NTG GPEK + + + ++ P KVGASEAT
Sbjct: 114 GAIAPLHVIIPAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEAT 173
Query: 571 LLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPT 392
LLNMLNISPFSYGL+V QVYDSG+IF+PEILDIKPEDLRAKFQ GVAN+AA+ L++GYPT
Sbjct: 174 LLNMLNISPFSYGLIVNQVYDSGSIFSPEILDIKPEDLRAKFQQGVANLAAVCLSVGYPT 233
Query: 391 IASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXXXXXXXXXXXXXX 215
IASAPHSIANGFKNLL IKE+IKDPSKF
Sbjct: 234 IASAPHSIANGFKNLLAIAATTEVEFKEATTIKEYIKDPSKFAAAASASAAPAAGGATEK 293
Query: 214 XXXXXXXXXXXXXSDDDMGFGLFD 143
DDDMGFGLFD
Sbjct: 294 KEEAKKPESESEEEDDDMGFGLFD 317
>X53286-1|CAA37380.1| 1023|Drosophila melanogaster glutactin
protein.
Length = 1023
Score = 29.9 bits (64), Expect = 4.2
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -1
Query: 601 VTKVG-ASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKF 446
VT VG A ATL + L++S + L + + SGT P ++D +P D + F
Sbjct: 240 VTLVGQAGGATLAHALSLSGRAGNLFQQLILQSGTALNPYLIDNQPLDTLSTF 292
>X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein (
Drosophila retrotransposon412 genome. ).
Length = 1237
Score = 29.9 bits (64), Expect = 4.2
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = -1
Query: 556 NISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAP 377
+I F +G + YD G ++ ILD+ R + QAG+ +++ + +A P
Sbjct: 802 SICLFKHGKKIIARYDVGDLYTNGILDLDQFLQRLELQAGIYDISQIKMA---PWKKIFE 858
Query: 376 HSIANGFKNL 347
H + FKN+
Sbjct: 859 HVSIDKFKNM 868
>AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependent
DNA polymerase protein.
Length = 1000
Score = 29.9 bits (64), Expect = 4.2
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = -1
Query: 556 NISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAP 377
+I F +G + YD G ++ ILD+ R + QAG+ +++ + +A P
Sbjct: 565 SICLFKHGKKIIARYDVGDLYTNGILDLDQFLQRLELQAGIYDISQIKMA---PWKKIFE 621
Query: 376 HSIANGFKNL 347
H + FKN+
Sbjct: 622 HVSIDKFKNM 631
>AY069776-1|AAL39921.1| 1026|Drosophila melanogaster SD01663p
protein.
Length = 1026
Score = 29.9 bits (64), Expect = 4.2
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -1
Query: 601 VTKVG-ASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKF 446
VT VG A ATL + L++S + L + + SGT P ++D +P D + F
Sbjct: 240 VTLVGQAGGATLAHALSLSGRAGNLFQQLILQSGTALNPYLIDNQPLDTLSTF 292
>AE014134-1548|AAF52697.1| 1026|Drosophila melanogaster CG9280-PC,
isoform C protein.
Length = 1026
Score = 29.9 bits (64), Expect = 4.2
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -1
Query: 601 VTKVG-ASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKF 446
VT VG A ATL + L++S + L + + SGT P ++D +P D + F
Sbjct: 240 VTLVGQAGGATLAHALSLSGRAGNLFQQLILQSGTALNPYLIDNQPLDTLSTF 292
>AE014134-1547|AAN10679.1| 1026|Drosophila melanogaster CG9280-PB,
isoform B protein.
Length = 1026
Score = 29.9 bits (64), Expect = 4.2
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -1
Query: 601 VTKVG-ASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKF 446
VT VG A ATL + L++S + L + + SGT P ++D +P D + F
Sbjct: 240 VTLVGQAGGATLAHALSLSGRAGNLFQQLILQSGTALNPYLIDNQPLDTLSTF 292
>AE014134-1546|AAN10678.1| 1026|Drosophila melanogaster CG9280-PA,
isoform A protein.
Length = 1026
Score = 29.9 bits (64), Expect = 4.2
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -1
Query: 601 VTKVG-ASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKF 446
VT VG A ATL + L++S + L + + SGT P ++D +P D + F
Sbjct: 240 VTLVGQAGGATLAHALSLSGRAGNLFQQLILQSGTALNPYLIDNQPLDTLSTF 292
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,129,681
Number of Sequences: 53049
Number of extensions: 587635
Number of successful extensions: 1318
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1302
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3716337612
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -