Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_T7_L08
         (777 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.      154   8e-40
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     27   0.15 
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   5.5  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   5.5  
AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    22   5.5  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   5.5  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   9.7  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   9.7  

>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score =  154 bits (374), Expect = 8e-40
 Identities = 79/123 (64%), Positives = 98/123 (79%), Gaps = 4/123 (3%)
 Frame = -3

Query: 643 PEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQLIE-ENDGKRI- 470
           P+++QHLA RFLNNYLF+AVGIVGGA +DVEQ F EV + +K++ LK+++E END   + 
Sbjct: 393 PDEVQHLARRFLNNYLFLAVGIVGGACSDVEQNFYEVARNKKKDLLKEILERENDSGTLG 452

Query: 469 --LVFVETKRNADFIAAMLSEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAA 296
             LVFVE K+ ADFIA  LSE    T+SIHGDR+QR+REEAL +FKSG+  ILVATAVAA
Sbjct: 453 GTLVFVEMKKKADFIAVFLSENNYPTTSIHGDRLQRQREEALADFKSGRMSILVATAVAA 512

Query: 295 RGL 287
           RGL
Sbjct: 513 RGL 515



 Score = 74.9 bits (176), Expect = 7e-16
 Identities = 35/44 (79%), Positives = 39/44 (88%)
 Frame = -2

Query: 773 FVVLDEADRMLDMGFMPSIEKMMLHPTMVETTKRQTLMFSATFP 642
           F+VLDEADRMLDMGF+PSIEKM+ H TMV   +RQTLMFSATFP
Sbjct: 350 FLVLDEADRMLDMGFLPSIEKMVDHETMVPLGERQTLMFSATFP 393


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 27.5 bits (58), Expect = 0.15
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
 Frame = +2

Query: 488 FLNELF*TVPFFIFSDFN--EDLFDVSTSASDDTNRHK 595
           F N+ +  VP+F+F DFN   D   V    ++DT   +
Sbjct: 213 FHNDKYSNVPYFLFGDFNFRTDTAGVIKKLTEDTQERR 250


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +1

Query: 187 IFGFPGRLEL 216
           IFGFPGRL L
Sbjct: 597 IFGFPGRLLL 606


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +1

Query: 187 IFGFPGRLEL 216
           IFGFPGRL L
Sbjct: 597 IFGFPGRLLL 606


>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = -1

Query: 429 QPCCRNSNCSHLQFTAIACNVSARKR 352
           +PC +N  CS L+     C     K+
Sbjct: 53  RPCTKNQQCSILRINRNRCQYCRLKK 78


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = -1

Query: 429 QPCCRNSNCSHLQFTAIACNVSARKR 352
           +PC +N  CS L+     C     K+
Sbjct: 102 RPCTKNQQCSILRINRNRCQYCRLKK 127


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 385  GDRMQREREEALQN 344
            GDRMQR  +E+ +N
Sbjct: 1641 GDRMQRPMKESQEN 1654


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 385  GDRMQREREEALQN 344
            GDRMQR  +E+ +N
Sbjct: 1637 GDRMQRPMKESQEN 1650


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,590
Number of Sequences: 438
Number of extensions: 3771
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24396777
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)