Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_T7_K24
         (844 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81103-2|CAB03213.1|  403|Caenorhabditis elegans Hypothetical pr...    55   6e-08
Z81103-1|CAB03208.2|  457|Caenorhabditis elegans Hypothetical pr...    55   6e-08
U50199-4|AAA91264.2|  142|Caenorhabditis elegans Abnormal cell l...    30   1.8  
AF016427-1|AAB65351.1|  594|Caenorhabditis elegans Hypothetical ...    29   4.1  
U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical pr...    28   7.2  
AL033514-7|CAA22114.1|  648|Caenorhabditis elegans Hypothetical ...    28   9.5  

>Z81103-2|CAB03213.1|  403|Caenorhabditis elegans Hypothetical
           protein M04G12.1b protein.
          Length = 403

 Score = 55.2 bits (127), Expect = 6e-08
 Identities = 26/45 (57%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
 Frame = -2

Query: 606 EDTXFRAXPQAXPHHKXCFPCSRDXIKRQ-QGSEVYCPSGEKCPL 475
           EDT F   P    H K CFPCSR  IK Q + S++YCPSG+KCPL
Sbjct: 279 EDTHFVQCPTVSIH-KFCFPCSRSSIKDQCKSSDMYCPSGDKCPL 322


>Z81103-1|CAB03208.2|  457|Caenorhabditis elegans Hypothetical
           protein M04G12.1a protein.
          Length = 457

 Score = 55.2 bits (127), Expect = 6e-08
 Identities = 26/45 (57%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
 Frame = -2

Query: 606 EDTXFRAXPQAXPHHKXCFPCSRDXIKRQ-QGSEVYCPSGEKCPL 475
           EDT F   P    H K CFPCSR  IK Q + S++YCPSG+KCPL
Sbjct: 306 EDTHFVQCPTVSIH-KFCFPCSRSSIKDQCKSSDMYCPSGDKCPL 349


>U50199-4|AAA91264.2|  142|Caenorhabditis elegans Abnormal cell
           lineage protein 32 protein.
          Length = 142

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = -2

Query: 249 STVTISVRSTNLTIDSISLPDDRRNASWTSFGDSCARRASDDAPVMFRMK 100
           ST+T  ++S N ++DS + PD   N         C RR    +P + RM+
Sbjct: 25  STMTTPLQSPNFSLDSPNYPDSLSNGGGKDDKKKC-RRYKTPSPQLLRMR 73


>AF016427-1|AAB65351.1|  594|Caenorhabditis elegans Hypothetical
           protein F32D1.1 protein.
          Length = 594

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +1

Query: 94  RELHSEHYGSVVGRPPRTRITKRSPRCISPIVGK*NRIDRE 216
           R+  S+  GS+ G PP  R      RC +P++ K   +D E
Sbjct: 234 RQSSSQSIGSLAGIPPARRAPDIPKRCSNPLIRKAMGMDTE 274


>U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical
           protein F42C5.10 protein.
          Length = 1292

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +3

Query: 99  TSFGTLRERRRTPAAHKNHQTKSTMHFADRREVKSN 206
           TSFG  R +     AH+ HQT +  H ++     S+
Sbjct: 220 TSFGMSRSKSMGSVAHEAHQTSNNQHSSETHGTASS 255


>AL033514-7|CAA22114.1|  648|Caenorhabditis elegans Hypothetical
           protein Y75B8A.7 protein.
          Length = 648

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 107 RNITGASSDARRAQESPNEVHDAFRRSSG 193
           +N TG S+D       PNE H+A +   G
Sbjct: 454 QNSTGNSADGAAGATKPNEAHEAIKSKMG 482


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,839,050
Number of Sequences: 27780
Number of extensions: 346158
Number of successful extensions: 881
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 877
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)