Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_K18
(827 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical pr... 128 5e-30
Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical pr... 128 5e-30
U72348-1|AAB17273.1| 355|Caenorhabditis elegans putative transc... 33 0.33
U39740-5|AAA80428.2| 355|Caenorhabditis elegans Lim domain fami... 33 0.33
U50199-4|AAA91264.2| 142|Caenorhabditis elegans Abnormal cell l... 31 0.76
Z81541-2|CAB04412.2| 152|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z81068-6|CAB02986.1| 725|Caenorhabditis elegans Hypothetical pr... 30 2.3
U97193-12|AAB52441.1| 283|Caenorhabditis elegans Hypothetical p... 30 2.3
AC024848-4|AAK68543.2| 1020|Caenorhabditis elegans Hypothetical ... 30 2.3
U41994-13|AAK31527.2| 1425|Caenorhabditis elegans Neuronal symme... 29 3.1
AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical ... 29 3.1
U61944-5|AAB03121.2| 482|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z22177-12|CAA80152.1| 974|Caenorhabditis elegans Hypothetical p... 28 7.1
Z19155-5|CAA79562.1| 974|Caenorhabditis elegans Hypothetical pr... 28 7.1
U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z81054-4|CAB02885.3| 321|Caenorhabditis elegans Hypothetical pr... 28 9.4
L02877-1|AAA50614.1| 321|Caenorhabditis elegans homeoprotein pr... 28 9.4
AL033514-7|CAA22114.1| 648|Caenorhabditis elegans Hypothetical ... 28 9.4
AF016430-2|AAB65371.1| 1106|Caenorhabditis elegans Gex interacti... 28 9.4
AF003384-5|AAB54239.2| 324|Caenorhabditis elegans Uncoupling pr... 28 9.4
AC006608-10|AAF39754.1| 801|Caenorhabditis elegans Hypothetical... 28 9.4
>Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical
protein M04G12.1b protein.
Length = 403
Score = 128 bits (309), Expect = 5e-30
Identities = 54/76 (71%), Positives = 63/76 (82%), Gaps = 1/76 (1%)
Frame = -3
Query: 636 LLKCTXCQERLEDTHFVQCPSQPHHKFCFPCSRDSIKRQ-QGSEVYCPSGEKCPLASSTV 460
+L+CT C ERLEDTHFVQCP+ HKFCFPCSR SIK Q + S++YCPSG+KCPL S +
Sbjct: 268 VLRCTLCNERLEDTHFVQCPTVSIHKFCFPCSRSSIKDQCKSSDMYCPSGDKCPLVGSAM 327
Query: 459 PWAFMQGEIATIMGDE 412
PWAFMQGEIA I+GDE
Sbjct: 328 PWAFMQGEIAQILGDE 343
>Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical
protein M04G12.1a protein.
Length = 457
Score = 128 bits (309), Expect = 5e-30
Identities = 54/76 (71%), Positives = 63/76 (82%), Gaps = 1/76 (1%)
Frame = -3
Query: 636 LLKCTXCQERLEDTHFVQCPSQPHHKFCFPCSRDSIKRQ-QGSEVYCPSGEKCPLASSTV 460
+L+CT C ERLEDTHFVQCP+ HKFCFPCSR SIK Q + S++YCPSG+KCPL S +
Sbjct: 295 VLRCTLCNERLEDTHFVQCPTVSIHKFCFPCSRSSIKDQCKSSDMYCPSGDKCPLVGSAM 354
Query: 459 PWAFMQGEIATIMGDE 412
PWAFMQGEIA I+GDE
Sbjct: 355 PWAFMQGEIAQILGDE 370
>U72348-1|AAB17273.1| 355|Caenorhabditis elegans putative
transcription factor LIM-4 protein.
Length = 355
Score = 32.7 bits (71), Expect = 0.33
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -3
Query: 642 APLLKCTXCQERLEDTHFVQCPSQPHHKFCFPCS 541
A ++ CT CQ +++D F+ + +H+ C CS
Sbjct: 93 AVIVICTQCQHQIQDKFFLSIDGRNYHENCLQCS 126
>U39740-5|AAA80428.2| 355|Caenorhabditis elegans Lim domain family
protein 4 protein.
Length = 355
Score = 32.7 bits (71), Expect = 0.33
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -3
Query: 642 APLLKCTXCQERLEDTHFVQCPSQPHHKFCFPCS 541
A ++ CT CQ +++D F+ + +H+ C CS
Sbjct: 93 AVIVICTQCQHQIQDKFFLSIDGRNYHENCLQCS 126
>U50199-4|AAA91264.2| 142|Caenorhabditis elegans Abnormal cell
lineage protein 32 protein.
Length = 142
Score = 31.5 bits (68), Expect = 0.76
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -1
Query: 251 STVTISVRSTNLTIDSISLPDDRRNASWTSFGDSCARRASDDAPVMFRMR 102
ST+T ++S N ++DS + PD N C RR +P + RMR
Sbjct: 25 STMTTPLQSPNFSLDSPNYPDSLSNGGGKDDKKKC-RRYKTPSPQLLRMR 73
>Z81541-2|CAB04412.2| 152|Caenorhabditis elegans Hypothetical
protein F48F5.2 protein.
Length = 152
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 7/64 (10%)
Frame = -1
Query: 707 RRPSGVVYRGPVKAPKCPHPH----PHRYSNAPXARNAWKIRI---SCSAPANRTISSVS 549
RRPS + GPV+ HPH P N RN + + + + N + +S S
Sbjct: 88 RRPSSLKVSGPVQGSSSSHPHNHGSPSSEPNTDLLRNVRDLHLTHANATVATNGSKNSTS 147
Query: 548 PAPG 537
+PG
Sbjct: 148 KSPG 151
>Z81068-6|CAB02986.1| 725|Caenorhabditis elegans Hypothetical
protein F25H5.5 protein.
Length = 725
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 82 TTKTNVNLIRNITGASSDARRAQESPNEVHD 174
TT+ +NL +N T SSD R +ES +E D
Sbjct: 289 TTERKINLPQNSTSVSSDKPRLEESESEDED 319
>U97193-12|AAB52441.1| 283|Caenorhabditis elegans Hypothetical
protein C06A5.8a protein.
Length = 283
Score = 29.9 bits (64), Expect = 2.3
Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 3/85 (3%)
Frame = -3
Query: 633 LKCTXCQERLEDTHFVQCPSQPHHKFCFPCSRDSIKRQQGSEVYCPS---GEKCPLASST 463
LKC C +T + H FC C + K + + CPS KC +A+ +
Sbjct: 36 LKCQVCCTNYNETTKLARGLHCGHTFCTECIKTMQKYGNSAYLECPSCRAETKCDIAAVS 95
Query: 462 VPWAFMQGEIATIMGDELKPEKERE 388
+A M E+ G L PEK E
Sbjct: 96 TNFAIM--ELIRKCG-FLGPEKPEE 117
>AC024848-4|AAK68543.2| 1020|Caenorhabditis elegans Hypothetical
protein Y67D8A.1 protein.
Length = 1020
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = -3
Query: 522 QQGSEVYCPSGEKCPLASSTVPWAFMQGEIATIMGDELKPEKERET*SGTWSGRLYLLS 346
Q+ ++Y +KC +A TVP ++ E + DE +KERE + T LY LS
Sbjct: 142 QEYGDIYFKKLQKCLVADETVPGGYIVPECYCV--DEFIMDKEREQPNST---ELYALS 195
>U41994-13|AAK31527.2| 1425|Caenorhabditis elegans Neuronal symmetry
protein 1 protein.
Length = 1425
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -1
Query: 653 HPHPHRYSNA-PXARNAWKIRISCSAPANRTISSVSPAPGTRS 528
H H SNA AR K+ + NRT SS SP P +S
Sbjct: 999 HVHSQTVSNALSTAREEKKLHLKIDHARNRTFSSSSPVPDGQS 1041
>AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical
protein F32D1.1 protein.
Length = 594
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 96 REPHSEHYGSVVGRPPRTRITKRSPRCISPIVGK*NRIDRE 218
R+ S+ GS+ G PP R RC +P++ K +D E
Sbjct: 234 RQSSSQSIGSLAGIPPARRAPDIPKRCSNPLIRKAMGMDTE 274
>U61944-5|AAB03121.2| 482|Caenorhabditis elegans Hypothetical
protein T12E12.1 protein.
Length = 482
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -3
Query: 630 KCTXCQERLEDTHFVQCPSQPHHKFCFPCSRDSIKRQQGSEVY 502
+C C E+ + +QC HH FC+ C D + GSE Y
Sbjct: 289 QCHSCIEKAGGCNHIQCTRCRHH-FCWMCFGD--WKSHGSEYY 328
>Z22177-12|CAA80152.1| 974|Caenorhabditis elegans Hypothetical
protein F54G8.4 protein.
Length = 974
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = -3
Query: 657 PASASAPLLKCTXCQERLEDTHFVQCPSQPHHKFCFPC 544
P LL C C +R + + C H FC+PC
Sbjct: 33 PLEKIEQLLTCPICLDRYKQPKLLPC----QHTFCYPC 66
>Z19155-5|CAA79562.1| 974|Caenorhabditis elegans Hypothetical
protein F54G8.4 protein.
Length = 974
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = -3
Query: 657 PASASAPLLKCTXCQERLEDTHFVQCPSQPHHKFCFPC 544
P LL C C +R + + C H FC+PC
Sbjct: 33 PLEKIEQLLTCPICLDRYKQPKLLPC----QHTFCYPC 66
>U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical
protein F42C5.10 protein.
Length = 1292
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 101 TSFGTLRERRRTPAAHKNHQTKSTMHFADRREVKSN 208
TSFG R + AH+ HQT + H ++ S+
Sbjct: 220 TSFGMSRSKSMGSVAHEAHQTSNNQHSSETHGTASS 255
>Z81054-4|CAB02885.3| 321|Caenorhabditis elegans Hypothetical
protein F01D4.6a protein.
Length = 321
Score = 27.9 bits (59), Expect = 9.4
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = -3
Query: 630 KCTXCQERLEDTHFVQCPSQPHHKFCFPCS 541
KC C E++ D + + ++ +H+ C C+
Sbjct: 28 KCNCCNEQIYDRYIYRMDNRSYHENCVKCT 57
>L02877-1|AAA50614.1| 321|Caenorhabditis elegans homeoprotein
protein.
Length = 321
Score = 27.9 bits (59), Expect = 9.4
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = -3
Query: 630 KCTXCQERLEDTHFVQCPSQPHHKFCFPCS 541
KC C E++ D + + ++ +H+ C C+
Sbjct: 28 KCNCCNEQIYDRYIYRMDNRSYHENCVKCT 57
>AL033514-7|CAA22114.1| 648|Caenorhabditis elegans Hypothetical
protein Y75B8A.7 protein.
Length = 648
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +1
Query: 109 RNITGASSDARRAQESPNEVHDAFRRSSG 195
+N TG S+D PNE H+A + G
Sbjct: 454 QNSTGNSADGAAGATKPNEAHEAIKSKMG 482
>AF016430-2|AAB65371.1| 1106|Caenorhabditis elegans Gex interacting
protein protein 6 protein.
Length = 1106
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +3
Query: 681 PVNDTGRSSKXXCXKARRPPPGRSTLKXWR 770
PVN TG S ++R+P P S WR
Sbjct: 938 PVNRTGNSQAPPWQRSRQPSPPPSNQSPWR 967
>AF003384-5|AAB54239.2| 324|Caenorhabditis elegans Uncoupling
protein (mitochondrialsubstrate carrier) protein 4
protein.
Length = 324
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +2
Query: 470 LARGHFSPLGQYTSDPCCLLIESREQGKQNLWCGWLGHCTK 592
L R PL +YT C R QG LW GW+ +C +
Sbjct: 152 LRRLQKQPL-RYTGATDCFRSLYRTQGFFGLWIGWMPNCQR 191
>AC006608-10|AAF39754.1| 801|Caenorhabditis elegans Hypothetical
protein C15F1.2 protein.
Length = 801
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -3
Query: 570 PHHKFCFPCSRDSIKRQQGSEVYC-PSGEKCPLASS 466
P+H CF + I+RQ G C PS EKC L SS
Sbjct: 131 PNH--CFTGVKRRIERQCGEVAKCCPSIEKCKLLSS 164
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,034,624
Number of Sequences: 27780
Number of extensions: 434196
Number of successful extensions: 1361
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1359
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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