Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_K16
(788 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC22A12.08c |||cardiolipin synthase/ hydrolase fusion protein ... 28 1.3
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 28 1.8
SPBC83.07 |jmj3||Lid2 complex subunit Jmj3|Schizosaccharomyces p... 27 2.3
SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6 |Schizosacc... 27 3.1
SPBC29A3.14c |trt1||telomerase reverse transcriptase 1 protein T... 27 3.1
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 3.1
SPAPB1E7.06c |eme1||Holliday junction resolvase subunit Eme1|Sch... 26 5.4
SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual 26 5.4
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 26 5.4
SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces p... 26 7.1
SPAC458.03 |||nuclear telomere cap complex subunit |Schizosaccha... 26 7.1
SPAC57A7.07c |||homocysteine methyltransferase |Schizosaccharomy... 25 9.4
SPAC13G7.10 |mug152||transcription factor |Schizosaccharomyces p... 25 9.4
SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomy... 25 9.4
SPBC32C12.02 |ste11|aff1, stex|transcription factor Ste11|Schizo... 25 9.4
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 25 9.4
>SPAC22A12.08c |||cardiolipin synthase/ hydrolase fusion protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 570
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 99 RNMARIYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVVVQYG 227
R +A Y+ + LGG++ S+ EK F + N DV+ + G
Sbjct: 112 RALADKYKHVLVLGGKDNSVRETAEKYGFKSVINELDVIAKLG 154
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 27.9 bits (59), Expect = 1.8
Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 4/82 (4%)
Frame = -3
Query: 723 SPXXINPPSPXXSXTSTRSSNPXFHTP----TTPDLTSISINPLTPX*KEFAPGLKPPLS 556
S +N +P S T+ +S P + +TP +S +N TP A PP++
Sbjct: 1598 SSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVLNSSTPITSSTALNTSPPIT 1657
Query: 555 SEAPSAYLTPSSLGMXKGVSPP 490
S TP + S P
Sbjct: 1658 SSTVVNSSTPITSSTVVNTSTP 1679
Score = 27.5 bits (58), Expect = 2.3
Identities = 20/82 (24%), Positives = 32/82 (39%), Gaps = 4/82 (4%)
Frame = -3
Query: 723 SPXXINPPSPXXSXTSTRSSNPXFHTP----TTPDLTSISINPLTPX*KEFAPGLKPPLS 556
S +N +P S T+ +S P + +TP +S ++N TP P++
Sbjct: 1574 SSSVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPIT 1633
Query: 555 SEAPSAYLTPSSLGMXKGVSPP 490
S TP + SPP
Sbjct: 1634 SSTVLNSSTPITSSTALNTSPP 1655
>SPBC83.07 |jmj3||Lid2 complex subunit Jmj3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 752
Score = 27.5 bits (58), Expect = 2.3
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -3
Query: 723 SPXXINPPSPXXSXTSTRSSNPXFHTPTT-PDLTSISI 613
SP INPPSP S + S+ T TT +L+S+ +
Sbjct: 399 SPNSINPPSPLMSNHESASTEHFNSTTTTEKELSSLHV 436
>SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 745
Score = 27.1 bits (57), Expect = 3.1
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = -1
Query: 254 CYFSTPPFDTVLYDNIRTVLKDNKTALLSASI 159
CY P + + L ++I+T+L DN ++ A++
Sbjct: 168 CYSLDPSYKSQLEEHIKTLLSDNSPIVVPAAL 199
>SPBC29A3.14c |trt1||telomerase reverse transcriptase 1 protein Trt1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 988
Score = 27.1 bits (57), Expect = 3.1
Identities = 20/78 (25%), Positives = 34/78 (43%)
Frame = -1
Query: 353 KVKIADNNLVTHKELALKVSSIIGTRVYVFDPSCYFSTPPFDTVLYDNIRTVLKDNKTAL 174
K K+ D V K + +S T+ +V + YF PF+ V+ +K + T
Sbjct: 608 KKKLKDPEFVIRKYATIHATSDRATKNFVSEAFSYFDMVPFEKVVQ---LLSMKTSDTLF 664
Query: 173 LSASIQASLPSSEIYRQL 120
+ + SSEI++ L
Sbjct: 665 VDFVDYWTKSSSEIFKML 682
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 27.1 bits (57), Expect = 3.1
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -3
Query: 705 PPSPXXSXTSTRSSNPXFHTPTTPDLTSISINPLTPX*KEFAPGLKPPLSSEAP 544
PP P + ++ SS+P T +T TS SI P P + PP SS P
Sbjct: 370 PPPPASTSSTGTSSSPLLST-STSCTTSTSIPPTGNSTTPVTPTV-PPTSSSTP 421
>SPAPB1E7.06c |eme1||Holliday junction resolvase subunit
Eme1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 26.2 bits (55), Expect = 5.4
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = -3
Query: 708 NPPSPXXSXTSTRSSNPXFHTPTTPDLTSISINPLTP-X*KEFAPGLKPPLSSEAPSAYL 532
+PP+ S + + FHTPT P T +S +P + + PLS +A S L
Sbjct: 122 SPPNSLSSQPKHQEFH-LFHTPTIPRTTQLSSKTSSPIVIPDDNEQVASPLSKKAAS--L 178
Query: 531 TPSSLGMXKGVSPPYFQVNDESQA 460
T S L + SPP V +S +
Sbjct: 179 TSSPLKDFQS-SPPLSTVLQKSHS 201
>SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1496
Score = 26.2 bits (55), Expect = 5.4
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = -3
Query: 681 TSTRSSNPXFHTPTTPDLTSISINPLTPX*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKG 502
T T S+NP T I N + K F+ PP++++ P +L P+S K
Sbjct: 687 TVTTSANPLGFKSTIQRPIPIKNNEDSDSCKAFSQA--PPIATKKPPTFLKPNSPEYAKT 744
Query: 501 VSP 493
V P
Sbjct: 745 VIP 747
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 26.2 bits (55), Expect = 5.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1
Query: 464 KLRALLVVIPRILRSPPPTHPLIEDV 387
KLR++L I ++LR P P PL+ +
Sbjct: 105 KLRSVLEQILQLLREPNPDDPLVASI 130
>SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 277
Score = 25.8 bits (54), Expect = 7.1
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = -3
Query: 723 SPXXINPPSPXXSXTSTRSSNPXFHTPTTPDLTSISINPLTPX*KEFAPGLKPP 562
SP P+ S TS + P PT +S I L+P K+ + G +PP
Sbjct: 127 SPSHSYEPTTFPSTTSITENLPTID-PTRSTRSSSHIQSLSPESKQTSDGHRPP 179
>SPAC458.03 |||nuclear telomere cap complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 868
Score = 25.8 bits (54), Expect = 7.1
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -3
Query: 141 LRDLPPVGRSSPCFFRLLWSLRKILIPYSSQFW 43
L++L +G SPC RL L +++P FW
Sbjct: 21 LKELQHIGVPSPCNLRLYHELISVIVP---TFW 50
>SPAC57A7.07c |||homocysteine methyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 308
Score = 25.4 bits (53), Expect = 9.4
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -1
Query: 329 LVTHKELALKVSSIIGTRVYVFDPSCY 249
+V H E LKV II T Y D S Y
Sbjct: 37 VVKHHEEFLKVCDIISTFTYQLDASIY 63
>SPAC13G7.10 |mug152||transcription factor |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 390
Score = 25.4 bits (53), Expect = 9.4
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 469 ITSFAPY*SSFHAYSAPLLQLTPSSKTSS 383
+ SF PY S F A P L ++PS+ +S
Sbjct: 302 LQSFHPYESLFSAGQPPSLPISPSTSQNS 330
>SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 384
Score = 25.4 bits (53), Expect = 9.4
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = -3
Query: 711 INPPSPXXSXTSTRSSNPXFHTPTTPDLTSISINPLTPX*KEFAPG--LKPPLSSEAPSA 538
I S + TS S++ ++ +TP+ S + LTP + L+ PL +PSA
Sbjct: 294 IRSHSTNTTITSVDSASTALNSYSTPNSVSRKLTNLTPAARRLVARSYLRSPLHGSSPSA 353
>SPBC32C12.02 |ste11|aff1, stex|transcription factor
Ste11|Schizosaccharomyces pombe|chr 2|||Manual
Length = 468
Score = 25.4 bits (53), Expect = 9.4
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 6/65 (9%)
Frame = -3
Query: 708 NPPSPXXSXTSTRSS-NPXFHTPTTPDLTSISINPLTPX*KEF-----APGLKPPLSSEA 547
N SP S S +P P+TP + SI+P TP + A L PLS +
Sbjct: 281 NSDSPELSADKVLSHCSPIDARPSTPSCPNASISPKTPNTGDHYGFDGAEYLGTPLSVGS 340
Query: 546 PSAYL 532
+AYL
Sbjct: 341 TTAYL 345
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 25.4 bits (53), Expect = 9.4
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +3
Query: 114 IYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVV 215
++Q A+ LG RS RC KSSF+ + DVV
Sbjct: 33 LHQQAL-LGRNGRSSKRCSPKSSFIRNSPKIDVV 65
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,873,207
Number of Sequences: 5004
Number of extensions: 56658
Number of successful extensions: 190
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 190
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 383374054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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