Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_K16
(788 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U91543-1|AAC39923.1| 2000|Homo sapiens zinc-finger helicase prot... 32 2.7
BC110648-1|AAI10649.1| 661|Homo sapiens CHD3 protein protein. 32 2.7
AF006515-1|AAB87383.1| 1944|Homo sapiens CHD3 protein. 32 2.7
CR456522-1|CAG30408.1| 931|Homo sapiens MKL1 protein. 31 3.6
BC115039-1|AAI15040.1| 798|Homo sapiens MKL1 protein protein. 31 3.6
M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein. 31 6.3
M74027-1|AAA59875.1| 573|Homo sapiens mucin protein. 31 6.3
L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein. 31 6.3
BC117331-1|AAI17332.1| 346|Homo sapiens selenoprotein V protein. 30 8.3
AY324825-1|AAP85542.1| 346|Homo sapiens selenoprotein V protein. 30 8.3
>U91543-1|AAC39923.1| 2000|Homo sapiens zinc-finger helicase protein.
Length = 2000
Score = 31.9 bits (69), Expect = 2.7
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = -3
Query: 705 PPSPXXSXTSTRSSNPXFHTPTTPDLTS----ISINPLTPX*KEFAPGLKPPLSSE 550
P S S+R+S+P +PTTP+ ++ + P TP E G++ PL E
Sbjct: 1519 PDPSADSKRSSRASSPTKTSPTTPEASATNSPCTSKPATPAPSEKGEGIRTPLEKE 1574
>BC110648-1|AAI10649.1| 661|Homo sapiens CHD3 protein protein.
Length = 661
Score = 31.9 bits (69), Expect = 2.7
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = -3
Query: 705 PPSPXXSXTSTRSSNPXFHTPTTPDLTS----ISINPLTPX*KEFAPGLKPPLSSE 550
P S S+R+S+P +PTTP+ ++ + P TP E G++ PL E
Sbjct: 180 PDPSADSKRSSRASSPTKTSPTTPEASATNSPCTSKPATPAPSEKGEGIRTPLEKE 235
>AF006515-1|AAB87383.1| 1944|Homo sapiens CHD3 protein.
Length = 1944
Score = 31.9 bits (69), Expect = 2.7
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = -3
Query: 705 PPSPXXSXTSTRSSNPXFHTPTTPDLTS----ISINPLTPX*KEFAPGLKPPLSSE 550
P S S+R+S+P +PTTP+ ++ + P TP E G++ PL E
Sbjct: 1519 PDPSADSKRSSRASSPTKTSPTTPEASATNSPCTSKPATPAPSEKGEGIRTPLEKE 1574
>CR456522-1|CAG30408.1| 931|Homo sapiens MKL1 protein.
Length = 931
Score = 31.5 bits (68), Expect = 3.6
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = -3
Query: 663 NPXFHTPTTPDLTSISINPLTPX*KEFAPGLKP-PLSSEAPSAYLTPSSLGMXKGVSPP 490
NP P T + ++ P P L+P P AP L P G+ KGV+PP
Sbjct: 598 NPSLAAPATNHIDPCAVAPGPPSVVVKQEALQPEPEPVPAPQLLLGPQGPGLIKGVAPP 656
>BC115039-1|AAI15040.1| 798|Homo sapiens MKL1 protein protein.
Length = 798
Score = 31.5 bits (68), Expect = 3.6
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = -3
Query: 663 NPXFHTPTTPDLTSISINPLTPX*KEFAPGLKP-PLSSEAPSAYLTPSSLGMXKGVSPP 490
NP P T + ++ P P L+P P AP L P G+ KGV+PP
Sbjct: 598 NPSLAAPATNHIDPCAVAPGPPSVVVKQEALQPEPEPVPAPQLLLGPQGPGLIKGVAPP 656
>M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein.
Length = 1270
Score = 30.7 bits (66), Expect = 6.3
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Frame = -3
Query: 702 PSPXXSXTST----RSSNPXFHTPTTPDLTSISINPLT-PX*KEFAPGLKPPLSSEAPSA 538
PSP + T+T + +P TP TP ++ ++ P T P PP ++ +P
Sbjct: 898 PSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPT 957
Query: 537 YLTPSSLGMXKGVSPP 490
TPS + PP
Sbjct: 958 TTTPSPPTITTTTPPP 973
Score = 30.3 bits (65), Expect = 8.3
Identities = 16/62 (25%), Positives = 29/62 (46%)
Frame = -3
Query: 705 PPSPXXSXTSTRSSNPXFHTPTTPDLTSISINPLTPX*KEFAPGLKPPLSSEAPSAYLTP 526
PP+ S +T + +P T TTP T+ +P+T + P + PS+ +T
Sbjct: 1027 PPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITT 1086
Query: 525 SS 520
++
Sbjct: 1087 TT 1088
>M74027-1|AAA59875.1| 573|Homo sapiens mucin protein.
Length = 573
Score = 30.7 bits (66), Expect = 6.3
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Frame = -3
Query: 702 PSPXXSXTST----RSSNPXFHTPTTPDLTSISINPLT-PX*KEFAPGLKPPLSSEAPSA 538
PSP + T+T + +P TP TP ++ ++ P T P PP ++ +P
Sbjct: 181 PSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPT 240
Query: 537 YLTPSSLGMXKGVSPP 490
TPS + PP
Sbjct: 241 TTTPSPPTITTTTPPP 256
Score = 30.3 bits (65), Expect = 8.3
Identities = 16/62 (25%), Positives = 29/62 (46%)
Frame = -3
Query: 705 PPSPXXSXTSTRSSNPXFHTPTTPDLTSISINPLTPX*KEFAPGLKPPLSSEAPSAYLTP 526
PP+ S +T + +P T TTP T+ +P+T + P + PS+ +T
Sbjct: 310 PPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITT 369
Query: 525 SS 520
++
Sbjct: 370 TT 371
>L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.
Length = 5179
Score = 30.7 bits (66), Expect = 6.3
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Frame = -3
Query: 702 PSPXXSXTST----RSSNPXFHTPTTPDLTSISINPLT-PX*KEFAPGLKPPLSSEAPSA 538
PSP + T+T + +P TP TP ++ ++ P T P PP ++ +P
Sbjct: 1523 PSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPT 1582
Query: 537 YLTPSSLGMXKGVSPP 490
TPS + PP
Sbjct: 1583 TTTPSPPTITTTTPPP 1598
Score = 30.3 bits (65), Expect = 8.3
Identities = 16/62 (25%), Positives = 29/62 (46%)
Frame = -3
Query: 705 PPSPXXSXTSTRSSNPXFHTPTTPDLTSISINPLTPX*KEFAPGLKPPLSSEAPSAYLTP 526
PP+ S +T + +P T TTP T+ +P+T + P + PS+ +T
Sbjct: 1652 PPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITT 1711
Query: 525 SS 520
++
Sbjct: 1712 TT 1713
>BC117331-1|AAI17332.1| 346|Homo sapiens selenoprotein V protein.
Length = 346
Score = 30.3 bits (65), Expect = 8.3
Identities = 26/80 (32%), Positives = 34/80 (42%), Gaps = 9/80 (11%)
Frame = -3
Query: 702 PSPXXSXTSTRSSNPXFHTPT-----TPDLTSISINPLTPX*KEFAPGLKP----PLSSE 550
PS + TS R+S P TPT TP T I LTP G P P ++
Sbjct: 10 PSSARTSTSVRASTPT-RTPTPLRTPTPVRTRTPIRTLTPVLTPSPAGTSPLVLTPAPAQ 68
Query: 549 APSAYLTPSSLGMXKGVSPP 490
P+ TP+ + + V PP
Sbjct: 69 IPTLVPTPALARIPRLVPPP 88
>AY324825-1|AAP85542.1| 346|Homo sapiens selenoprotein V protein.
Length = 346
Score = 30.3 bits (65), Expect = 8.3
Identities = 26/80 (32%), Positives = 34/80 (42%), Gaps = 9/80 (11%)
Frame = -3
Query: 702 PSPXXSXTSTRSSNPXFHTPT-----TPDLTSISINPLTPX*KEFAPGLKP----PLSSE 550
PS + TS R+S P TPT TP T I LTP G P P ++
Sbjct: 10 PSSARTSTSVRASTPT-RTPTPLRTPTPVRTRTPIRTLTPVLTPSPAGTSPLVLTPAPAQ 68
Query: 549 APSAYLTPSSLGMXKGVSPP 490
P+ TP+ + + V PP
Sbjct: 69 IPTLVPTPALARIPRLVPPP 88
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,701,056
Number of Sequences: 237096
Number of extensions: 2137895
Number of successful extensions: 5357
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5339
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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