Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_K13
(772 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 233 1e-61
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 233 1e-61
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 233 1e-61
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 233 1e-61
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 233 1e-61
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 233 1e-61
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 233 1e-61
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 233 1e-61
U88184-11|AAM98019.1| 123|Caenorhabditis elegans Hypothetical p... 29 3.7
Z66521-16|CAA91396.2| 793|Caenorhabditis elegans Hypothetical p... 28 8.5
AF188715-1|AAF05590.1| 793|Caenorhabditis elegans alanyl-tRNA s... 28 8.5
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 233 bits (570), Expect = 1e-61
Identities = 109/162 (67%), Positives = 131/162 (80%)
Frame = -3
Query: 584 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 405
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 297
Query: 404 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 225
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 298 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 354
Query: 224 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 99
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 355 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 74.9 bits (176), Expect = 6e-14
Identities = 36/72 (50%), Positives = 49/72 (68%)
Frame = -2
Query: 771 EAHIMEIQLTGGTIEDKVNGPREHFGETYPCRFCVCPKMK*LTALVSPKGKGYKGVTSRW 592
+AH++EIQ+ GGTIE KV+ REH + V + + + + +G G+KGVTSRW
Sbjct: 177 KAHLVEIQVNGGTIEQKVDWAREHLEKQVQVD-TVFAQDEMIDTIGVTRGHGFKGVTSRW 235
Query: 591 HTKKLPRKTHQG 556
HTKKLPRKTH+G
Sbjct: 236 HTKKLPRKTHKG 247
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 233 bits (570), Expect = 1e-61
Identities = 109/162 (67%), Positives = 131/162 (80%)
Frame = -3
Query: 584 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 405
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 297
Query: 404 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 225
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 298 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 354
Query: 224 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 99
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 355 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 74.9 bits (176), Expect = 6e-14
Identities = 36/72 (50%), Positives = 49/72 (68%)
Frame = -2
Query: 771 EAHIMEIQLTGGTIEDKVNGPREHFGETYPCRFCVCPKMK*LTALVSPKGKGYKGVTSRW 592
+AH++EIQ+ GGTIE KV+ REH + V + + + + +G G+KGVTSRW
Sbjct: 177 KAHLVEIQVNGGTIEQKVDWAREHLEKQVQVD-TVFAQDEMIDTIGVTRGHGFKGVTSRW 235
Query: 591 HTKKLPRKTHQG 556
HTKKLPRKTH+G
Sbjct: 236 HTKKLPRKTHKG 247
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 233 bits (570), Expect = 1e-61
Identities = 109/162 (67%), Positives = 131/162 (80%)
Frame = -3
Query: 584 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 405
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 140 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 199
Query: 404 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 225
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 200 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 256
Query: 224 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 99
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 257 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298
Score = 74.9 bits (176), Expect = 6e-14
Identities = 36/72 (50%), Positives = 49/72 (68%)
Frame = -2
Query: 771 EAHIMEIQLTGGTIEDKVNGPREHFGETYPCRFCVCPKMK*LTALVSPKGKGYKGVTSRW 592
+AH++EIQ+ GGTIE KV+ REH + V + + + + +G G+KGVTSRW
Sbjct: 79 KAHLVEIQVNGGTIEQKVDWAREHLEKQVQVD-TVFAQDEMIDTIGVTRGHGFKGVTSRW 137
Query: 591 HTKKLPRKTHQG 556
HTKKLPRKTH+G
Sbjct: 138 HTKKLPRKTHKG 149
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 233 bits (570), Expect = 1e-61
Identities = 109/162 (67%), Positives = 131/162 (80%)
Frame = -3
Query: 584 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 405
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 249
Query: 404 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 225
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 250 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 306
Query: 224 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 99
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 307 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348
Score = 52.4 bits (120), Expect = 3e-07
Identities = 20/24 (83%), Positives = 23/24 (95%)
Frame = -2
Query: 627 KGKGYKGVTSRWHTKKLPRKTHQG 556
+G G+KGVTSRWHTKKLPRKTH+G
Sbjct: 176 RGHGFKGVTSRWHTKKLPRKTHKG 199
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 233 bits (570), Expect = 1e-61
Identities = 109/162 (67%), Positives = 131/162 (80%)
Frame = -3
Query: 584 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 405
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 297
Query: 404 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 225
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 298 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 354
Query: 224 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 99
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 355 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 74.9 bits (176), Expect = 6e-14
Identities = 36/72 (50%), Positives = 49/72 (68%)
Frame = -2
Query: 771 EAHIMEIQLTGGTIEDKVNGPREHFGETYPCRFCVCPKMK*LTALVSPKGKGYKGVTSRW 592
+AH++EIQ+ GGTIE KV+ REH + V + + + + +G G+KGVTSRW
Sbjct: 177 KAHLVEIQVNGGTIEQKVDWAREHLEKQVQVD-TVFAQDEMIDTIGVTRGHGFKGVTSRW 235
Query: 591 HTKKLPRKTHQG 556
HTKKLPRKTH+G
Sbjct: 236 HTKKLPRKTHKG 247
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 233 bits (570), Expect = 1e-61
Identities = 109/162 (67%), Positives = 131/162 (80%)
Frame = -3
Query: 584 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 405
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 140 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 199
Query: 404 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 225
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 200 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 256
Query: 224 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 99
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 257 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298
Score = 74.9 bits (176), Expect = 6e-14
Identities = 36/72 (50%), Positives = 49/72 (68%)
Frame = -2
Query: 771 EAHIMEIQLTGGTIEDKVNGPREHFGETYPCRFCVCPKMK*LTALVSPKGKGYKGVTSRW 592
+AH++EIQ+ GGTIE KV+ REH + V + + + + +G G+KGVTSRW
Sbjct: 79 KAHLVEIQVNGGTIEQKVDWAREHLEKQVQVD-TVFAQDEMIDTIGVTRGHGFKGVTSRW 137
Query: 591 HTKKLPRKTHQG 556
HTKKLPRKTH+G
Sbjct: 138 HTKKLPRKTHKG 149
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 233 bits (570), Expect = 1e-61
Identities = 109/162 (67%), Positives = 131/162 (80%)
Frame = -3
Query: 584 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 405
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 249
Query: 404 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 225
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 250 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 306
Query: 224 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 99
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 307 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348
Score = 52.4 bits (120), Expect = 3e-07
Identities = 20/24 (83%), Positives = 23/24 (95%)
Frame = -2
Query: 627 KGKGYKGVTSRWHTKKLPRKTHQG 556
+G G+KGVTSRWHTKKLPRKTH+G
Sbjct: 176 RGHGFKGVTSRWHTKKLPRKTHKG 199
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 233 bits (570), Expect = 1e-61
Identities = 109/162 (67%), Positives = 131/162 (80%)
Frame = -3
Query: 584 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 405
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 297
Query: 404 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 225
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 298 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 354
Query: 224 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 99
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 355 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 74.9 bits (176), Expect = 6e-14
Identities = 36/72 (50%), Positives = 49/72 (68%)
Frame = -2
Query: 771 EAHIMEIQLTGGTIEDKVNGPREHFGETYPCRFCVCPKMK*LTALVSPKGKGYKGVTSRW 592
+AH++EIQ+ GGTIE KV+ REH + V + + + + +G G+KGVTSRW
Sbjct: 177 KAHLVEIQVNGGTIEQKVDWAREHLEKQVQVD-TVFAQDEMIDTIGVTRGHGFKGVTSRW 235
Query: 591 HTKKLPRKTHQG 556
HTKKLPRKTH+G
Sbjct: 236 HTKKLPRKTHKG 247
>U88184-11|AAM98019.1| 123|Caenorhabditis elegans Hypothetical
protein F36H5.2a protein.
Length = 123
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -1
Query: 736 YHRGQSEWAQRTFWRNLSLSILCLPQDEMIDCIGVT 629
+ G+++W+ WRNL I L ++ DC+GV+
Sbjct: 20 FSNGENQWSDEMIWRNL---IWKLKISKLDDCLGVS 52
>Z66521-16|CAA91396.2| 793|Caenorhabditis elegans Hypothetical
protein W02B12.6a protein.
Length = 793
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 640 CSQSFHLGANTESTGIGFSKMFS 708
C Q HLG N TG+GF ++ S
Sbjct: 237 CGQIRHLGKNHIDTGMGFERLLS 259
>AF188715-1|AAF05590.1| 793|Caenorhabditis elegans alanyl-tRNA
synthetase protein.
Length = 793
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 640 CSQSFHLGANTESTGIGFSKMFS 708
C Q HLG N TG+GF ++ S
Sbjct: 237 CGQIRHLGKNHIDTGMGFERLLS 259
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,132,842
Number of Sequences: 27780
Number of extensions: 437625
Number of successful extensions: 1177
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1157
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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