Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_K11
(836 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0175 + 22966151-22967614 36 0.040
10_08_0793 - 20614583-20614897,20615417-20615660,20617713-206178... 32 0.65
01_06_0381 + 28878811-28879120,28880189-28880331,28880753-288815... 32 0.65
01_07_0213 - 42028941-42029055,42029444-42029480,42029876-420302... 31 1.1
06_01_1095 + 8984363-8984789,8985175-8985416,8985500-8985622,898... 30 2.6
01_06_0140 - 26881282-26881290,26882027-26882128,26882816-268829... 30 2.6
11_01_0044 + 340486-340854,341855-341911,343100-343974,344065-34... 29 3.5
03_06_0180 + 32175658-32178145,32178765-32178808 29 3.5
11_05_0086 + 18964493-18965737,18965896-18966360 29 4.6
08_01_0201 + 1635964-1637010 29 4.6
02_03_0287 + 17320242-17320481,17323422-17324767,17325124-17325142 29 4.6
08_02_0707 - 20212190-20214592 29 6.1
01_01_0140 + 1265785-1265902,1266424-1266845 29 6.1
02_05_0482 + 29382696-29383251,29383376-29383692 28 8.0
01_06_1809 - 40029628-40030539 28 8.0
>05_05_0175 + 22966151-22967614
Length = 487
Score = 35.9 bits (79), Expect = 0.040
Identities = 28/74 (37%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Frame = +1
Query: 154 P*RKC---SRSAGAPISAVRAGGVISSFGGPVGRPPLQSRRS-ARFSRTGWAATAEVSPP 321
P R C S +AG P SA R GG S G P PPL +R+ FS W ++ V
Sbjct: 75 PRRSCCGSSSAAGTPRSAARCGGG-GSPGAPPSSPPLSPQRTHVPFS---WESSPGVPKD 130
Query: 322 ATCADS--QDILPP 357
A C +++LPP
Sbjct: 131 AACGRKVVREVLPP 144
>10_08_0793 -
20614583-20614897,20615417-20615660,20617713-20617899,
20618508-20618547,20618699-20618775,20618965-20619091
Length = 329
Score = 31.9 bits (69), Expect = 0.65
Identities = 27/86 (31%), Positives = 35/86 (40%)
Frame = +1
Query: 361 KLLTATNLTSHHANYNFTGSTSLTRCYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHR 540
++ T L HH N RC+S ++ A L H H ++ L P E E R
Sbjct: 98 QIWTDMQLQDHHHECN----GPYCRCHSSSKHAKGSLLLLHHHH--QQQQLQRPNEMETR 151
Query: 541 RIARHERTGRLILQVTTNSDVSIFLP 618
R +TG L Q DVS LP
Sbjct: 152 RAEASTQTGFLRSQGICERDVSSGLP 177
>01_06_0381 +
28878811-28879120,28880189-28880331,28880753-28881532,
28882568-28883968
Length = 877
Score = 31.9 bits (69), Expect = 0.65
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +1
Query: 448 TEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARHERTGR 570
+ E EH SS +H HR + H + EHR RH+R R
Sbjct: 778 SSEDEHEHRSSKSRHR-HRDDYHYHEDDEHRSSHRHQRDHR 817
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/52 (36%), Positives = 23/52 (44%)
Frame = +1
Query: 388 SHHANYNFTGSTSLTRCYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRR 543
S NY+ S +R H E +R H S HKH L R + EP H R
Sbjct: 725 SDEENYDSEESYKHSR-KKHRSEDSRAHTSDVHKHKLKRHS--KDLEPRHHR 773
>01_07_0213 -
42028941-42029055,42029444-42029480,42029876-42030244,
42030332-42031201,42051574-42052891
Length = 902
Score = 31.1 bits (67), Expect = 1.1
Identities = 25/72 (34%), Positives = 34/72 (47%)
Frame = +1
Query: 259 SRRSARFSRTGWAATAEVSPPATCADSQDILPPCKLLTATNLTSHHANYNFTGSTSLTRC 438
+RR R TG A+ S PAT + + P +LLT+ TSH + N T S
Sbjct: 671 ARRRERQQLTGSAS----SSPATASAAAASKKP-RLLTSQTTTSHTSTSNATTPRSFDTT 725
Query: 439 YSHTEEANREHL 474
SH + + RE L
Sbjct: 726 SSHQDASFRESL 737
>06_01_1095 +
8984363-8984789,8985175-8985416,8985500-8985622,
8985783-8985899,8986258-8986399,8986587-8986627,
8987194-8987453,8987505-8987607,8987698-8987776,
8987856-8988115
Length = 597
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/35 (54%), Positives = 21/35 (60%)
Frame = +3
Query: 99 TLTSLVGPATAQSPTRRRTLAQVQPERGGSNIGSP 203
TL L+ PA A SPTRRR L + P SN GSP
Sbjct: 25 TLPRLL-PAAAPSPTRRRRL--LAPLAAASNSGSP 56
>01_06_0140 -
26881282-26881290,26882027-26882128,26882816-26882924,
26883712-26883860,26883941-26884043,26884635-26884810,
26885004-26885066,26885258-26885346,26885428-26885538,
26885610-26885744,26886415-26886580,26886788-26886856,
26886943-26887230,26888612-26888866
Length = 607
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = -1
Query: 575 IRRPVRSCLAMRRCSGSAGGCRFFR*SACLCVLDKCSRLASSV 447
+R R A R C GSAG R R SA V+ + RL + V
Sbjct: 31 LRPAARLSFAPRWCGGSAGAARARRESAVTSVISRAPRLDAEV 73
>11_01_0044 +
340486-340854,341855-341911,343100-343974,344065-344398,
345553-345645,345913-346062
Length = 625
Score = 29.5 bits (63), Expect = 3.5
Identities = 21/71 (29%), Positives = 29/71 (40%)
Frame = +1
Query: 220 SSFGGPVGRPPLQSRRSARFSRTGWAATAEVSPPATCADSQDILPPCKLLTATNLTSHHA 399
S FG + P RR F+RTGW A A V P + L+ T L +
Sbjct: 419 SFFGRLLSALPDFLRRKVSFARTGWLAAALVPMPMAFFLMWKLHDVNTLVAGTALIGLSS 478
Query: 400 NYNFTGSTSLT 432
+ F + S+T
Sbjct: 479 GFIFAAAVSVT 489
>03_06_0180 + 32175658-32178145,32178765-32178808
Length = 843
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 240 RPASVTVEAICPVLADWVGRDRGSLTSGYLCRLTRHFTTMQTS 368
RP SVT+ ++ P L D G ++G GY+ R H S
Sbjct: 345 RPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVS 387
>11_05_0086 + 18964493-18965737,18965896-18966360
Length = 569
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = -1
Query: 236 GPPNDEITPPARTADIGAPALRLHLR*GAPPRRRL 132
GPP D PP T + A L H R PP R L
Sbjct: 82 GPPPDPNQPPPFTNVVSAALLARHRRAAVPPLRAL 116
>08_01_0201 + 1635964-1637010
Length = 348
Score = 29.1 bits (62), Expect = 4.6
Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Frame = -1
Query: 335 SAQVAGGETSAVAAHPVRENRADRL--DCNGGRPTGPPNDEITPPARTADIGAPALRLHL 162
SA + G + A+ A R DRL DC R G P P AD+ P L HL
Sbjct: 107 SAAMYGVKVEAIQALQANYVRRDRLTIDC-AVRVVGKPRVSAAAPLTAADVPPPDLAAHL 165
>02_03_0287 + 17320242-17320481,17323422-17324767,17325124-17325142
Length = 534
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +2
Query: 338 HKTFYHHANFLPQQILPATTQTTILRVPPLLHDVTPTLRKPTAN 469
H+ F +FLP +I L+VPP LH V P P A+
Sbjct: 75 HRWFAQGFHFLPARIPMDGPSGWFLKVPPPLHTVDPPGSPPPAS 118
>08_02_0707 - 20212190-20214592
Length = 800
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +1
Query: 388 SHHANYNFTGSTSLTRCYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARH 555
SHH +++ S + S TE + +E+ S H H H + H +E H++ H
Sbjct: 549 SHHHDHHHDSSNEESHHNSLTENSCKENHSHCHGHDHHHHHHHDHSE-HHQQSGDH 603
>01_01_0140 + 1265785-1265902,1266424-1266845
Length = 179
Score = 28.7 bits (61), Expect = 6.1
Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Frame = -1
Query: 332 AQVAGGETSA--VAAHPVRENRADRLDCNGGRPTGPPNDEITPPARTADIGAPA 177
A+ AGGE +A A+ NRA R G T D PA A APA
Sbjct: 90 ARAAGGEDAAGGEASRASSANRASRARAAAGEDTVGREDSRASPANRARAAAPA 143
>02_05_0482 + 29382696-29383251,29383376-29383692
Length = 290
Score = 28.3 bits (60), Expect = 8.0
Identities = 22/69 (31%), Positives = 26/69 (37%)
Frame = +1
Query: 145 GGAP*RKCSRSAGAPISAVRAGGVISSFGGPVGRPPLQSRRSARFSRTGWAATAEVSPPA 324
G P R P S R GG GG + R+ARFS T A AEV +
Sbjct: 33 GNFPWLSRKRLGAKPPSPQRRGGQEREGGGDEAAGMGTTTRAARFSATSSAEPAEVQSSS 92
Query: 325 TCADSQDIL 351
+ D L
Sbjct: 93 SSRKRADAL 101
>01_06_1809 - 40029628-40030539
Length = 303
Score = 28.3 bits (60), Expect = 8.0
Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Frame = +1
Query: 193 SAVRAGGVISSFGGPVGRPPLQSRRSARFSRTGWAATAEVSPPATCADSQDILPPCKLLT 372
+A A G GG + PL+ R R + + W + SP ++S L+
Sbjct: 37 AAAGASGGGGGVGGMINWKPLRDRLRLRRAASAWMS---ASPKPAASNSGGGGGGGATLS 93
Query: 373 ATNLTSHHAN-YNFT---GSTSLTRCYSHT 450
++N S+H+N YN++ + + +R +S T
Sbjct: 94 SSNSGSNHSNKYNYSPGEAAAAFSRTFSRT 123
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,276,807
Number of Sequences: 37544
Number of extensions: 580484
Number of successful extensions: 2027
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2027
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2315199948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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