Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_T7_K05
         (835 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0582 - 4318837-4318967,4319219-4319399,4319504-4319701,431...   209   2e-54
07_03_1272 - 25360180-25360286,25360454-25360658,25360748-253609...   206   2e-53
12_02_1059 - 25744184-25745334,25745595-25746262,25747376-25747902     29   3.5  
03_02_0792 + 11236785-11237337,11237711-11238261,11238446-112386...    29   6.0  
12_02_1050 + 25689933-25690954,25691021-25691215,25691357-25691423     28   8.0  
02_02_0084 + 6637145-6638677                                           28   8.0  

>03_01_0582 -
           4318837-4318967,4319219-4319399,4319504-4319701,
           4319791-4320053,4320453-4320597
          Length = 305

 Score =  209 bits (510), Expect = 2e-54
 Identities = 95/155 (61%), Positives = 119/155 (76%)
 Frame = -2

Query: 780 VAIETPXDVXVXSSRPFGQRAVLKFAAHTGATXIAXRFTPGAFTNQIQAAFREPRLLIVL 601
           VAIE P D+ V S+RP+GQRAVLKFA +TGA  IA R TPG FTNQ+Q +F EPRLLI+ 
Sbjct: 70  VAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILT 129

Query: 600 DPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMSWLLAREVLRL 421
           DP  DHQPI E++  NIP IA C+TDSP+R+VDI IP N K  +SIG + WLLAR VL++
Sbjct: 130 DPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGRNSIGCLFWLLARMVLQM 189

Query: 420 RGVLPRDQRWDVVVDLFFYRDPEESEKDEQQAKEQ 316
           RG +    +WDV+VDLFFYRDPEE+++ E++A  Q
Sbjct: 190 RGTILPGHKWDVMVDLFFYRDPEEAKEQEEEAPAQ 224


>07_03_1272 -
           25360180-25360286,25360454-25360658,25360748-25360945,
           25361034-25361296,25361865-25362009
          Length = 305

 Score =  206 bits (503), Expect = 2e-53
 Identities = 93/151 (61%), Positives = 116/151 (76%)
 Frame = -2

Query: 780 VAIETPXDVXVXSSRPFGQRAVLKFAAHTGATXIAXRFTPGAFTNQIQAAFREPRLLIVL 601
           VAIE P D+ V S+RP+GQRAVLKFA +TGA  IA R TPG FTNQ+Q +F EPRLLI+ 
Sbjct: 70  VAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILT 129

Query: 600 DPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMSWLLAREVLRL 421
           DP  DHQPI E++  NIP IA C+TDSP+R+VDI IP N K   SIG + WLLAR VL++
Sbjct: 130 DPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQM 189

Query: 420 RGVLPRDQRWDVVVDLFFYRDPEESEKDEQQ 328
           RG +    +WDV+VDLFFYRDPEE+++ E++
Sbjct: 190 RGTILPGHKWDVMVDLFFYRDPEEAKEQEEE 220


>12_02_1059 - 25744184-25745334,25745595-25746262,25747376-25747902
          Length = 781

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -1

Query: 208 TRCSSCFWSTPCSRRMVCPGTR*VEHN 128
           T C  C    P   + VCPG+R V+ N
Sbjct: 275 TECKKCLAGAPAGIKQVCPGSRTVKAN 301


>03_02_0792 +
           11236785-11237337,11237711-11238261,11238446-11238628,
           11238768-11238966,11239055-11239761
          Length = 730

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
 Frame = -2

Query: 699 HTGATXIAXRFTPGAFTNQIQAAFREPRLLI--VLDPAQDHQPITEASYVNIPVIALCNT 526
           HT +T    R TP AF +   AA  E R+ +  +   ++      EA Y +I V  + + 
Sbjct: 270 HTLSTGETVRVTPAAFDSVTPAAIDETRVAVAAIRQKSEFSDVRVEAQYRHIEVFDMRSP 329

Query: 525 DSPLR 511
           + P++
Sbjct: 330 EQPMQ 334


>12_02_1050 + 25689933-25690954,25691021-25691215,25691357-25691423
          Length = 427

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -1

Query: 208 TRCSSCFWSTPCSRRMVCPGTR*VEHN 128
           T+C  C    P     VCPG+R V  N
Sbjct: 93  TQCKECLAGAPAGITQVCPGSRTVNAN 119


>02_02_0084 + 6637145-6638677
          Length = 510

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
 Frame = -2

Query: 711 KFAAHTGATXIAXRFTPGAF---TNQIQAAFREPRLLIVLDPAQ-DHQPITEASYVNIPV 544
           + A H GAT +     PG F     ++ A        ++LD +  D     + ++  +P 
Sbjct: 63  RVARHGGATVLRVNMPPGPFLAGDPRVVALLDARSFRVLLDDSMVDKADTLDGTF--MPS 120

Query: 543 IALCNTDSPLRFVDIAIPCNTK 478
           +AL     PL F+D A P + K
Sbjct: 121 LALFGGHRPLAFLDAADPRHAK 142


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,521,325
Number of Sequences: 37544
Number of extensions: 413797
Number of successful extensions: 1085
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1052
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1085
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2303447664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)