Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_T7_J24
         (854 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   2.7  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       23   3.6  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   4.7  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    23   4.7  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
 Frame = +1

Query: 385  DPAP-----YVPVQIKNSQRSQCDTTSKTNTHQVVQTRQX*GGSVTQ 510
            DP+P     Y P Q  N+Q+ Q    +K  + +  + +   GG  T+
Sbjct: 988  DPSPFKRGRYTPPQPANAQQGQAQAQAKPQSQEANKPKPATGGKGTR 1034


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +2

Query: 584 HWVVVSIVXPTGLLTFRLGPLPVGWMV 664
           H +++ +     L+TF + PL +GW +
Sbjct: 74  HIMLMHLAIADLLVTFLMMPLEIGWAI 100


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 377 WNCIGIIGSKM*YFYHNILMNLYVL 303
           WN +G+ G+ + YF   I  +  VL
Sbjct: 442 WNVLGVQGALLSYFIEPIYFHSIVL 466


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +2

Query: 335 KNITSLIQ*YLCSSRLETPLLTFQ 406
           + ++S+   Y C  R E P+++FQ
Sbjct: 644 EEVSSIETNYECGLRFEDPMISFQ 667


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,625
Number of Sequences: 438
Number of extensions: 4194
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27552579
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)