Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_T7_J16
         (810 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.             190   1e-50
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    27   0.16 
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   7.7  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   7.7  

>AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.
          Length = 133

 Score =  190 bits (464), Expect = 1e-50
 Identities = 93/117 (79%), Positives = 97/117 (82%), Gaps = 1/117 (0%)
 Frame = -3

Query: 757 IPDGQVIXIGTKD-SVAQXFFPTXVFGYGACGIHETTNNSIMKCDVDIRKDLYANTVLSG 581
           +PDGQVI IG +     +  F     G  ACGIHETT NSIMKCDVDIRKDLYANTVLSG
Sbjct: 17  LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 76

Query: 580 GTTMYPGIADRMQKEITAXAPSTMKIKIIAPPERKYSVWIGGSILASLFTFQQMWXS 410
           GTTMYPGIADRMQKEITA APSTMKIKIIAPPE+KYSVWIGGSILASL TFQQMW S
Sbjct: 77  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPEKKYSVWIGGSILASLSTFQQMWIS 133


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 27.5 bits (58), Expect = 0.16
 Identities = 22/63 (34%), Positives = 31/63 (49%)
 Frame = -3

Query: 649 NNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAXAPSTMKIKIIAPPERKYS 470
           NN  +K D DI++  Y + V      MYP  +  M+K I+    +  KI I  P E K  
Sbjct: 341 NNKELKYD-DIKEMEYLDKVFKETLRMYPPASILMRKAISDYTFNDTKITI--PKEMK-- 395

Query: 469 VWI 461
           +WI
Sbjct: 396 IWI 398


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 593 RIVRWYHHVPWNRRPYAK 540
           RI+ +YH    +++PY K
Sbjct: 424 RIIDYYHSYKMHQKPYNK 441


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 593 RIVRWYHHVPWNRRPYAK 540
           RI+ +YH    +++PY K
Sbjct: 424 RIIDYYHSYKMHQKPYNK 441


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,188
Number of Sequences: 438
Number of extensions: 3985
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)