Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_T7_J13
         (799 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    26   0.35 
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   7.6  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   7.6  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 26.2 bits (55), Expect = 0.35
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +1

Query: 181 GHEFHLQPIPDPLRQGSQDEVHHHVEEYRRQ 273
           GH+   QP   PL +    E HH +   RRQ
Sbjct: 60  GHDDREQPSVYPLLRFENPETHHPIRHGRRQ 90


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 633 LRHFHSILARRLLASCPPDARQR 565
           +R+F  +LA   L  C P+ +QR
Sbjct: 1   MRYFIILLALVALGVCAPNVKQR 23


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -2

Query: 378 GYIAHLYDTASTTLAVNNEMSS 313
           GY      T STT++V NE+S+
Sbjct: 3   GYYQMKQITNSTTMSVKNEIST 24


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,743
Number of Sequences: 438
Number of extensions: 4841
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25246416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)