Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_J02
(761 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0031 - 7534327-7534480,7535546-7535649,7535724-7535793,753... 31 1.3
06_01_1096 - 8988463-8989167,8989335-8989361,8989560-8989648,898... 30 1.7
12_01_0302 - 2286171-2286341,2286747-2286968 29 4.0
09_04_0737 - 19822822-19822973,19823069-19823135,19823666-198238... 29 5.3
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 29 5.3
02_05_0640 - 30558523-30559027,30559123-30559252,30559388-305598... 29 5.3
08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,322... 28 7.1
07_01_0077 + 566895-567127,567207-567331,571204-571340,571437-57... 28 9.3
06_01_1069 + 8731567-8731632,8732120-8732281,8733028-8733081,873... 28 9.3
02_02_0718 - 13290764-13290897,13292375-13293041,13293364-132937... 28 9.3
>05_03_0031 -
7534327-7534480,7535546-7535649,7535724-7535793,
7535889-7535932,7536042-7536146,7536223-7536344,
7536807-7536894,7536966-7537052,7537718-7537786,
7537859-7538188,7539777-7539824,7540003-7540069,
7540150-7540208,7541220-7541453,7541536-7541601,
7541684-7541883,7542104-7542197,7542295-7542414,
7542596-7542703,7542808-7542871,7543378-7543409,
7546049-7548007
Length = 1407
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 502 TPLAMPSDEGVRYADGASDDNGGFNPGANSFWYGVRGLME 621
+P +DEG D ++D GGF+ G +S W + G E
Sbjct: 92 SPPPPAADEGSPGGDDGAEDAGGFSAGLDSLWTALFGSPE 131
>06_01_1096 -
8988463-8989167,8989335-8989361,8989560-8989648,
8989830-8990039,8990877-8991047,8991595-8991777,
8991886-8991969,8992067-8992178
Length = 526
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -1
Query: 647 PTTPDLTSISINPLTPYQKEFAPGLKPPL 561
P TP SI+ P PYQK P L+PPL
Sbjct: 294 PQTPPRPSIASIP--PYQKPLKPSLRPPL 320
>12_01_0302 - 2286171-2286341,2286747-2286968
Length = 130
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 82 RLQRSRKKHGEDLPTGGRSRRKGEKLE*MQREEQ 183
RL+R RK + D+ G + +GEKLE + +E+
Sbjct: 57 RLERLRKGYARDVRAAGAMKVRGEKLENWREKEK 90
>09_04_0737 -
19822822-19822973,19823069-19823135,19823666-19823822,
19824003-19824177,19824364-19824481,19824676-19824874,
19824983-19825062,19825141-19825257,19825791-19825961,
19826121-19826597
Length = 570
Score = 28.7 bits (61), Expect = 5.3
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +2
Query: 74 FYVDSKGVGRNMARIYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVVV 220
F+VD G G + ++++LAV+ G R CR VV DVVV
Sbjct: 93 FHVDPTGDGSSFLQLHRLAVE-GTRRLLAACCRSGVRTVVYTGSADVVV 140
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = -1
Query: 653 HTPTTPDL--TSISINPLTPYQKEFAPGLKPPLSSEAPSAYLTPSSLGMAKGVSPPY 489
++PT+P TS +P +P +P P PS +PSS SP Y
Sbjct: 1780 YSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTPSHAYSPSSPNYYSSTSPTY 1836
>02_05_0640 - 30558523-30559027,30559123-30559252,30559388-30559868,
30560292-30560346,30560537-30560613,30561228-30561315,
30561490-30561593,30562050-30562231,30562347-30563109,
30563195-30563438,30564513-30564658,30565158-30565283,
30565404-30565517,30565595-30565762,30566283-30566528,
30566605-30566767,30566970-30567064,30567274-30567357,
30567769-30568055,30568359-30568572,30568923-30569140,
30569386-30569623,30570312-30571118,30571202-30571301,
30571694-30571737,30571824-30571973
Length = 1942
Score = 28.7 bits (61), Expect = 5.3
Identities = 20/65 (30%), Positives = 30/65 (46%)
Frame = -2
Query: 241 PPFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLVDPRHVSSDSFGVYVKS*SL 62
P F T+LY ++KD S+ L S+ Y L+DP S D+ + +
Sbjct: 1349 PEFHTLLYAEAARIIKDCWWLADSSRPVKELDSAVGYA-LLDPTWASQDNTSTAIGNIVA 1407
Query: 61 ILHSF 47
+LHSF
Sbjct: 1408 LLHSF 1412
>08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,
3220080-3223195,3223303-3223561,3223665-3223951,
3224029-3224364,3224463-3224604,3224690-3224910,
3224990-3225151,3225242-3225400,3225488-3225787,
3226306-3226569,3227370-3227453
Length = 1855
Score = 28.3 bits (60), Expect = 7.1
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = -1
Query: 653 HTPTTPDL--TSISINPLTPYQKEFAPGLKPPLSSEAPSAYLTPSS--LGMAKGVSPPY 489
++PT+P TS S +P +P +P P + +PS +PSS L SP Y
Sbjct: 1718 YSPTSPGYSPTSPSYSPTSPNYSPTSPSYNPSSAKYSPSHAYSPSSPRLSPYSQTSPNY 1776
>07_01_0077 +
566895-567127,567207-567331,571204-571340,571437-571542,
571635-571885,572018-572128,572209-572320,572626-572716,
573168-573507,573678-573900,573946-574204,574274-574481,
574572-574622,574712-574870,574956-575120,575322-575399,
575732-576031,576107-576259,576871-576918,577019-577188,
577738-577852,578462-578623,578789-578893,578969-579199,
579277-579410,579484-579738,579822-580110,580214-580306,
580395-580520,580646-580897
Length = 1693
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 633 LNIHFHQSPDAVPEGVRAGVKASVVIRGSISVSHPL 526
L +H Q VP+G++ V S ++ SI S+P+
Sbjct: 407 LLVHLVQFSANVPDGLKGTVNWSTIVDASIDASYPI 442
>06_01_1069 +
8731567-8731632,8732120-8732281,8733028-8733081,
8733557-8733630,8733706-8733786,8734902-8735079,
8735336-8735506,8736113-8736202,8736284-8736331,
8736447-8736562,8736655-8736733,8737101-8737223
Length = 413
Score = 27.9 bits (59), Expect = 9.3
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -1
Query: 581 PGLKPPLSSEAPSAYLTPSSLGMAKGVSPPYFQVNDESQASRLISG 444
P +PP++S P+A TP++ A + Y Q AS L+SG
Sbjct: 122 PSAQPPVASATPAAAATPAAAVTASSDADVYSQA-----ASNLVSG 162
>02_02_0718 -
13290764-13290897,13292375-13293041,13293364-13293719,
13294559-13294629,13295326-13295336
Length = 412
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -2
Query: 442 IPRILRSPPPTHPLIEDVVMATNQAIIDYK 353
+P++L+SPP T+ IED + + ID K
Sbjct: 382 LPQLLQSPPETYHAIEDGHNPSKTSFIDMK 411
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,316,134
Number of Sequences: 37544
Number of extensions: 440990
Number of successful extensions: 1320
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1318
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2039640244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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