Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_T7_J02
         (761 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA...    31   2.3  
AE014296-3057|AAN11668.1| 2133|Drosophila melanogaster CG14073-P...    29   9.2  

>AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA
           protein.
          Length = 926

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 19/51 (37%), Positives = 25/51 (49%)
 Frame = -1

Query: 647 PTTPDLTSISINPLTPYQKEFAPGLKPPLSSEAPSAYLTPSSLGMAKGVSP 495
           PTTP  T  SI+P T  +KE AP  +    +   +   TP   G  +G SP
Sbjct: 413 PTTPKTTVKSISPTTTTKKEVAPKKRSATPTARSTKAGTPVG-GTERGPSP 462


>AE014296-3057|AAN11668.1| 2133|Drosophila melanogaster CG14073-PB,
           isoform B protein.
          Length = 2133

 Score = 28.7 bits (61), Expect = 9.2
 Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
 Frame = -2

Query: 724 RPYAS-SHXPLRXRXHQPDHQIPDSIHQPPQT*HPFPSIP 608
           +P+ S  H P      QP HQ P    QP    HP P  P
Sbjct: 14  QPHPSMQHHPTHPHHQQPHHQQPHHPQQPIHQHHPPPPPP 53


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,690,819
Number of Sequences: 53049
Number of extensions: 698634
Number of successful extensions: 2249
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2246
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3499501170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)