Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_T7_I19
         (815 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0357 + 22660239-22660628                                         31   1.1  
03_06_0025 - 31110027-31110507,31111640-31111804,31113134-31113432     29   3.3  
10_08_0732 - 20173816-20174137,20175824-20176023,20176099-20176998     29   5.8  
07_01_0539 - 3985623-3986653,3986752-3987046                           29   5.8  
05_03_0162 - 9050981-9051003,9051141-9052273,9052388-9053310,905...    28   7.7  

>11_06_0357 + 22660239-22660628
          Length = 129

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = -3

Query: 471 KGAVNLTNKEQWCYYRLTGDALRDFAKDG*ANVSTTSG*RRWT 343
           +G+V +T +  W + R T + L   AKDG AN+   +G   WT
Sbjct: 82  EGSVGVTCRRVWAHLRKTDEEL--VAKDGYANLRRPNGLSTWT 122


>03_06_0025 - 31110027-31110507,31111640-31111804,31113134-31113432
          Length = 314

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 26/87 (29%), Positives = 33/87 (37%)
 Frame = +2

Query: 116 ERDAVRPKVVYEIVEHVHLLRVDVVERHGVVGTTIQALVAGVVDVAPVPEALVLVREQVV 295
           ER +  P VV    E  H       +R GV G  + A + G   VA   +    V     
Sbjct: 172 ERSSDDPSVVITTYEGQHCHHTASFQR-GVGGAAVAAHIHGAAAVALAEQMSAFV----- 225

Query: 296 LRDEREEPAPPHRVAGVHRLHPDVVET 376
                  P  PH + G+ RLHP   ET
Sbjct: 226 -----SPPPQPHMLYGLPRLHPPSSET 247


>10_08_0732 - 20173816-20174137,20175824-20176023,20176099-20176998
          Length = 473

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = +2

Query: 104 LAGSERDAVRPKVVYEIVEHVHLLRVDVVERHGVVGTTIQALVAGVV 244
           L G  R       +Y + EHV ++   V+ERHGV    I A   G +
Sbjct: 233 LLGFGRSPKPADSLYTLREHVEMIERSVIERHGVKSFHIVAHSLGSI 279


>07_01_0539 - 3985623-3986653,3986752-3987046
          Length = 441

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = -2

Query: 262 WYWSYIYYPSDEGLDCCSDHAVTFHYVNPQQMYVFDYL 149
           W++++++  S+ GL   SD    F Y        FDY+
Sbjct: 87  WWYTFLHKHSELGLSAPSDEGEAFRYFFRTSRRTFDYI 124


>05_03_0162 -
           9050981-9051003,9051141-9052273,9052388-9053310,
           9053560-9054615
          Length = 1044

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = -1

Query: 521 WTSTSWSGILLVRFTR--AKVR*I*LTRSSGATTGLREMH 408
           W+  +WSG+L V F+   A  R +  TR      G++ MH
Sbjct: 293 WSDRAWSGLLKVPFSHGAAGSRVLVTTRHDAVARGMQAMH 332


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,411,026
Number of Sequences: 37544
Number of extensions: 354432
Number of successful extensions: 1013
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1012
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2232933960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)