Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_T7_I17
         (837 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for MG...    52   3e-06
BC006350-1|AAH06350.1|  619|Homo sapiens BUD13 homolog (S. cerev...    31   5.2  
AF091081-1|AAC72950.1|  303|Homo sapiens unknown protein.              30   9.0  

>BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for
           MGC:134704) protein.
          Length = 44

 Score = 51.6 bits (118), Expect = 3e-06
 Identities = 24/30 (80%), Positives = 25/30 (83%)
 Frame = +2

Query: 584 MIGRADIEGSKSNVAMNAWLAQASYPVVTF 673
           MIGRADIEGSKS+VAMNAW  QASYP   F
Sbjct: 1   MIGRADIEGSKSDVAMNAWPPQASYPCGNF 30


>BC006350-1|AAH06350.1|  619|Homo sapiens BUD13 homolog (S.
           cerevisiae) protein.
          Length = 619

 Score = 31.1 bits (67), Expect = 5.2
 Identities = 18/45 (40%), Positives = 23/45 (51%)
 Frame = +3

Query: 33  AGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSR 167
           +G S  R +HD+  PS  PR+ R  S+D S PR      PD   R
Sbjct: 211 SGASPRRVRHDSPDPSP-PRRARHGSSDISSPRRVHNNSPDTSRR 254


>AF091081-1|AAC72950.1|  303|Homo sapiens unknown protein.
          Length = 303

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = -2

Query: 416 CTRPSGRWCEAT-IRGIMPERLQGRSQPSRIRQGYAHCGAPRVGRL 282
           C+RP+GRW + T +    P+ L    +PSR    +  C   R  RL
Sbjct: 170 CSRPAGRWGDLTMLPSPRPQLLPALRRPSRACCAWPTCSPHRPHRL 215


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,699,127
Number of Sequences: 237096
Number of extensions: 2543089
Number of successful extensions: 5935
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5928
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10538170902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)