Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_T7_I17
         (837 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78015-7|CAB01438.1|  381|Caenorhabditis elegans Hypothetical pr...    28   7.2  
Z77657-10|CAB01152.1|  381|Caenorhabditis elegans Hypothetical p...    28   7.2  
Z93387-2|CAB07650.1|  763|Caenorhabditis elegans Hypothetical pr...    28   9.5  
Z82286-5|CAB05311.1|  130|Caenorhabditis elegans Hypothetical pr...    28   9.5  

>Z78015-7|CAB01438.1|  381|Caenorhabditis elegans Hypothetical
           protein F08H9.9 protein.
          Length = 381

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 16/44 (36%), Positives = 18/44 (40%)
 Frame = +1

Query: 337 GWLRPWRRSGIIPRMVASHHRPLGRVHEPNVRNCGSSRTEQYYY 468
           GWL  W      P +  S +   G    PN  N   S TEQ YY
Sbjct: 259 GWLLNWNAKAYTPNVNQSGNG--GNFTSPNYPNDYDSYTEQMYY 300


>Z77657-10|CAB01152.1|  381|Caenorhabditis elegans Hypothetical
           protein F08H9.9 protein.
          Length = 381

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 16/44 (36%), Positives = 18/44 (40%)
 Frame = +1

Query: 337 GWLRPWRRSGIIPRMVASHHRPLGRVHEPNVRNCGSSRTEQYYY 468
           GWL  W      P +  S +   G    PN  N   S TEQ YY
Sbjct: 259 GWLLNWNAKAYTPNVNQSGNG--GNFTSPNYPNDYDSYTEQMYY 300


>Z93387-2|CAB07650.1|  763|Caenorhabditis elegans Hypothetical
           protein T02E9.3 protein.
          Length = 763

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
 Frame = -3

Query: 433 FGHLVHALGRAAGGAKLPSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQCDFTSRV 254
           FG L H  G       LP   +    S+  + ++++G    +   R+SGGSK+   +   
Sbjct: 212 FGQLTHRGGERERRHSLPRVIIEEVRSRRGSRMSQTGSQSGSPTRRQSGGSKERSPSQPD 271

Query: 253 SH--SKRETRRRSP 218
            H  +K + R RSP
Sbjct: 272 IHIVAKPQQRWRSP 285


>Z82286-5|CAB05311.1|  130|Caenorhabditis elegans Hypothetical
           protein W02A2.8 protein.
          Length = 130

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
 Frame = -2

Query: 461 YCSVREEPQFRTFGSCTRPSGRW------CEATIRGIMPERLQGRSQPSRIRQGYAHCGA 300
           YC +R  P+ RT  SC  P  R+      CE  + G MPE     S+   +++G A   A
Sbjct: 56  YCHLRI-PKSRTSRSCPDPWRRYGAHVKLCE--VGGWMPENRNKNSKVIVVKKGSAPPAA 112

Query: 299 PRVGRL*TM 273
           PR   L T+
Sbjct: 113 PRCKPLMTV 121


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,295,416
Number of Sequences: 27780
Number of extensions: 377947
Number of successful extensions: 1073
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1073
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)