Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_I16
(858 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 33 0.26
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.26
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.26
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.26
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.34
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.34
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.34
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 32 0.45
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 32 0.45
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 32 0.60
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 32 0.60
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 31 0.79
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 1.1
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 31 1.1
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 1.4
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 30 2.4
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 30 2.4
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 30 2.4
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 3.2
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 3.2
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z72502-7|CAA96592.1| 140|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 4.2
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 4.2
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 4.2
AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin fami... 29 5.6
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 5.6
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 28 7.4
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 28 7.4
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 28 7.4
U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical pr... 28 9.8
U40802-3|AAM81105.1| 369|Caenorhabditis elegans Dense body prot... 28 9.8
U40802-2|AAM81104.1| 1010|Caenorhabditis elegans Dense body prot... 28 9.8
U40802-1|AAM81106.1| 999|Caenorhabditis elegans Dense body prot... 28 9.8
J04804-1|AAA28002.1| 1010|Caenorhabditis elegans protein ( C.ele... 28 9.8
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 28 9.8
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 28 9.8
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 28 9.8
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 28 9.8
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 9.8
AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical ... 28 9.8
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 28 9.8
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 33.1 bits (72), Expect = 0.26
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = -1
Query: 840 GEGGGGXXGAXRXGGGGXCX*GXXXXXWXAGGXXXXXGG 724
G GGGG G GGGG C G GG GG
Sbjct: 123 GGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGG 161
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -1
Query: 840 GEGGGGXXGAXRXGGGGXCX*GXXXXXWXAGGXXXXXGG 724
G GGG G GGGG C G GG GG
Sbjct: 131 GGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGG 169
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -1
Query: 840 GEGGGGXXGAXRXGGGGXCX*GXXXXXWXAGGXXXXXGG 724
G G GG G GGGG C G GG GG
Sbjct: 138 GGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGG 176
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -1
Query: 840 GEGGGGXXGAXRXGGGGXCX*GXXXXXWXAGGXXXXXGG 724
G GG G G GGGG C G GG GG
Sbjct: 145 GGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGGG 183
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.1 bits (72), Expect = 0.26
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +2
Query: 746 PPAXXSXXXXPYXXXPPPPXRXAPXXPPPP 835
PP S P PPPP +P PPPP
Sbjct: 274 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 303
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +2
Query: 725 PPXXXXXPPAXXSXXXXPYXXXPPPPXRXAPXXPPPP 835
PP PP P PPP R PPPP
Sbjct: 266 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 302
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Frame = +2
Query: 725 PPXXXXXPP--AXXSXXXXPYXXXPPPPXRXAPXXPPPPSP 841
PP PP S P PPPP +P PP SP
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSP 280
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/43 (34%), Positives = 16/43 (37%), Gaps = 4/43 (9%)
Frame = +2
Query: 725 PPXXXXXPPAXXSXXXXPYXXXPPPPXRXAPXXP----PPPSP 841
P PP S P PPPP +P P PPP P
Sbjct: 259 PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 301
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +2
Query: 725 PPXXXXXPPAXXSXXXXPYXXXPPPPXRXAPXXPPPP 835
PP PP P PPPP A PPPP
Sbjct: 258 PPAAGSPPPPRTGSPPPPPTGSPPPP--PAGGSPPPP 292
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.1 bits (72), Expect = 0.26
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +2
Query: 746 PPAXXSXXXXPYXXXPPPPXRXAPXXPPPP 835
PP S P PPPP +P PPPP
Sbjct: 295 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 324
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +2
Query: 725 PPXXXXXPPAXXSXXXXPYXXXPPPPXRXAPXXPPPP 835
PP PP P PPP R PPPP
Sbjct: 287 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 323
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Frame = +2
Query: 725 PPXXXXXPP--AXXSXXXXPYXXXPPPPXRXAPXXPPPPSP 841
PP PP S P PPPP +P PP SP
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSP 301
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/43 (34%), Positives = 16/43 (37%), Gaps = 4/43 (9%)
Frame = +2
Query: 725 PPXXXXXPPAXXSXXXXPYXXXPPPPXRXAPXXP----PPPSP 841
P PP S P PPPP +P P PPP P
Sbjct: 280 PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 322
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +2
Query: 725 PPXXXXXPPAXXSXXXXPYXXXPPPPXRXAPXXPPPP 835
PP PP P PPPP A PPPP
Sbjct: 279 PPAAGSPPPPRTGSPPPPPTGSPPPP--PAGGSPPPP 313
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.1 bits (72), Expect = 0.26
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +2
Query: 746 PPAXXSXXXXPYXXXPPPPXRXAPXXPPPP 835
PP S P PPPP +P PPPP
Sbjct: 280 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 309
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +2
Query: 725 PPXXXXXPPAXXSXXXXPYXXXPPPPXRXAPXXPPPP 835
PP PP P PPP R PPPP
Sbjct: 272 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 308
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Frame = +2
Query: 725 PPXXXXXPP--AXXSXXXXPYXXXPPPPXRXAPXXPPPPSP 841
PP PP S P PPPP +P PP SP
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSP 286
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/43 (34%), Positives = 16/43 (37%), Gaps = 4/43 (9%)
Frame = +2
Query: 725 PPXXXXXPPAXXSXXXXPYXXXPPPPXRXAPXXP----PPPSP 841
P PP S P PPPP +P P PPP P
Sbjct: 265 PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 307
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +2
Query: 725 PPXXXXXPPAXXSXXXXPYXXXPPPPXRXAPXXPPPP 835
PP PP P PPPP A PPPP
Sbjct: 264 PPAAGSPPPPRTGSPPPPPTGSPPPP--PAGGSPPPP 298
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.7 bits (71), Expect = 0.34
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +2
Query: 725 PPXXXXXPPAXXSXXXXPYXXXPPPPXRXAPXXPPPPSP 841
PP PP P PPPP PPPP P
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Score = 32.7 bits (71), Expect = 0.34
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +2
Query: 725 PPXXXXXPPAXXSXXXXPYXXXPPPPXRXAPXXPPPPSPXXIA 853
PP PP P PPPP PPPP P A
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFA 794
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.7 bits (71), Expect = 0.34
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +2
Query: 725 PPXXXXXPPAXXSXXXXPYXXXPPPPXRXAPXXPPPPSP 841
PP PP P PPPP PPPP P
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Score = 32.7 bits (71), Expect = 0.34
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +2
Query: 725 PPXXXXXPPAXXSXXXXPYXXXPPPPXRXAPXXPPPPSPXXIA 853
PP PP P PPPP PPPP P A
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFA 794
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.7 bits (71), Expect = 0.34
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +2
Query: 725 PPXXXXXPPAXXSXXXXPYXXXPPPPXRXAPXXPPPPSP 841
PP PP P PPPP PPPP P
Sbjct: 319 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 357
Score = 32.7 bits (71), Expect = 0.34
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +2
Query: 725 PPXXXXXPPAXXSXXXXPYXXXPPPPXRXAPXXPPPPSPXXIA 853
PP PP P PPPP PPPP P A
Sbjct: 335 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFA 377
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 32.3 bits (70), Expect = 0.45
Identities = 14/44 (31%), Positives = 16/44 (36%)
Frame = +2
Query: 725 PPXXXXXPPAXXSXXXXPYXXXPPPPXRXAPXXPPPPSPXXIAC 856
PP P S P PP P PPPP+P + C
Sbjct: 91 PPPPPASPCCGPSPVPAPCCPPPPAPAAPCCPPPPPPTPSPLVC 134
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 7/51 (13%)
Frame = +2
Query: 725 PPXXXXXPPAXXSXXXXPYXXX----PPPPXRXAPXXPPPPSP---XXIAC 856
PP PP S P PPPP AP PPPP P + C
Sbjct: 85 PPAPLPPPPPPASPCCGPSPVPAPCCPPPPAPAAPCCPPPPPPTPSPLVCC 135
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/45 (31%), Positives = 16/45 (35%)
Frame = +2
Query: 722 TPPXXXXXPPAXXSXXXXPYXXXPPPPXRXAPXXPPPPSPXXIAC 856
+P PPA P P AP PPPP+P C
Sbjct: 77 SPSCCPYVPPAPLPPPPPPASPCCGPSPVPAPCCPPPPAPAAPCC 121
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 32.3 bits (70), Expect = 0.45
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = -1
Query: 855 QAIXXGEGGGGXXGAXRXGGGGXCX*GXXXXXWXAGGXXXXXGG 724
Q + GGGG G GGGG C G GG GG
Sbjct: 79 QPVYVQSGGGGCGGGGCGGGGGGCGGGGGCGGGGGGGCGGGGGG 122
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -1
Query: 840 GEGGGGXXGAXRXGGGGXCX*GXXXXXWXAGGXXXXXGG 724
G GGGG G GGGG G GG GG
Sbjct: 96 GGGGGGCGGGGGCGGGGGGGCGGGGGGGCGGGGGGGGGG 134
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -1
Query: 834 GGGGXXGAXRXGGGGXCX*GXXXXXWXAGGXXXXXGG 724
GGG G GGGG C G GG GG
Sbjct: 92 GGGCGGGGGGCGGGGGCGGGGGGGCGGGGGGGCGGGG 128
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 31.9 bits (69), Expect = 0.60
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = -1
Query: 840 GEGGGGXXGAXRXGGGGXCX*GXXXXXWXAGGXXXXXGG 724
G GGGG G R GGGG G GG GG
Sbjct: 93 GRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGGRGGG 131
Score = 28.7 bits (61), Expect = 5.6
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -1
Query: 840 GEGGGGXXGAXRXGGGG 790
G GGGG G R GGGG
Sbjct: 83 GNGGGGNGGGGRGGGGG 99
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.9 bits (69), Expect = 0.60
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 1/40 (2%)
Frame = +2
Query: 725 PPXXXXXPP-AXXSXXXXPYXXXPPPPXRXAPXXPPPPSP 841
PP PP P PPPP P PPPP P
Sbjct: 41 PPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPP 80
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +2
Query: 725 PPXXXXXPPAXXSXXXXPYXXXPPPPXRXAPXXPPPPSPXXIAC 856
PP P P PPPP P PPPP P C
Sbjct: 46 PPPPICPPQFCPPPPMCPPPPPPPPPPMCPP--PPPPMPSYSPC 87
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +2
Query: 725 PPXXXXXPPAXXSXXXXPYXXXPPPPXRXAPXXPPPP 835
PP P P PPPP P PPPP
Sbjct: 35 PPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPP 71
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/46 (32%), Positives = 16/46 (34%), Gaps = 7/46 (15%)
Frame = +2
Query: 725 PPXXXXXPPAXXSXXXXPYXXXP-------PPPXRXAPXXPPPPSP 841
PP PP + P P PPP P PPPP P
Sbjct: 27 PPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPP 72
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 31.5 bits (68), Expect = 0.79
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 746 PPAXXSXXXXPYXXXPPPPXRXAPXXPPPP 835
PP Y PPPP P PPPP
Sbjct: 119 PPVQYQNQGPQYIEAPPPPPSPPPPPPPPP 148
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 791 PPPPXRXAPXXPPPPSPXXIA 853
PPPP AP PPPPS +A
Sbjct: 106 PPPPMFGAPPPPPPPSGLGVA 126
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = +2
Query: 746 PPAXXSXXXXPYXXXPPPPXRXAPXXPPPPSPXXIAC 856
PP + P PPPP P PPPP +C
Sbjct: 57 PPPCPAQFCPPPPICPPPPPPPMPCPPPPPPMPRPSC 93
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +2
Query: 728 PXXXXXPPAXXSXXXXPYXXXPPPPXRXAPXXPPPPSP 841
P PP P PPPP PPPP P
Sbjct: 52 PVCPPPPPCPAQFCPPPPICPPPPPPPMPCPPPPPPMP 89
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +2
Query: 722 TPPXXXXXPPAXXSXXXXPYXXXPPPPXRXAPXXPPPP 835
TP P A P PPPP A PPPP
Sbjct: 32 TPMCQPRMPCAAPMPMPMPMPVCPPPPPCPAQFCPPPP 69
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +2
Query: 746 PPAXXSXXXXPYXXXPPPPXRXAPXXPPPP 835
PP + P PPPP P PPPP
Sbjct: 566 PPLPQNLSGAPPPPPPPPPMLGGPPPPPPP 595
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 791 PPPPXRXAPXXPPPPSPXXIAC 856
PPPP PPPP P I C
Sbjct: 243 PPPPSPVCMPPPPPPCPMPIPC 264
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 791 PPPPXRXAPXXPPPPSPXXIAC 856
PPP AP PPPP P C
Sbjct: 43 PPPMCGCAPPPPPPPPPPMCGC 64
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/41 (31%), Positives = 15/41 (36%)
Frame = +2
Query: 710 VLXXTPPXXXXXPPAXXSXXXXPYXXXPPPPXRXAPXXPPP 832
++ TPP PP P PPPP PPP
Sbjct: 62 IVKATPPPPPPPPPLISILQQAPPPPPPPPPPTLKAPPPPP 102
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -1
Query: 840 GEGGGGXXGAXRXGGGGXCX*GXXXXXWXAGGXXXXXGG 724
G GGG G GGGG C G GG GG
Sbjct: 85 GGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGG 123
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -1
Query: 840 GEGGGGXXGAXRXGGGGXCX*GXXXXXWXAGGXXXXXGG 724
G GGG G GGGG C G GG GG
Sbjct: 92 GGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGG 130
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -1
Query: 840 GEGGGGXXGAXRXGGGGXCX*GXXXXXWXAGGXXXXXGG 724
G GG G G GGGG C G GG GG
Sbjct: 99 GGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGG 137
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -1
Query: 840 GEGGGGXXGAXRXGGGGXCX*GXXXXXWXAGGXXXXXGG 724
G GGG G GGGG C G GG GG
Sbjct: 85 GGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGG 123
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -1
Query: 840 GEGGGGXXGAXRXGGGGXCX*GXXXXXWXAGGXXXXXGG 724
G GGG G GGGG C G GG GG
Sbjct: 92 GGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGG 130
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -1
Query: 840 GEGGGGXXGAXRXGGGGXCX*GXXXXXWXAGGXXXXXGG 724
G GG G G GGGG C G GG GG
Sbjct: 99 GGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGG 137
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +2
Query: 722 TPPXXXXXPPAXXSXXXXPYXXXPPPPXRXAPXXPPPPS 838
TPP P S PPPP + PPPP+
Sbjct: 73 TPPPPPTGEPQDLSAEEGNASRRPPPPPKGTGTPPPPPT 111
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +2
Query: 725 PPXXXXXPPAXXSXXXXPYXXXPPPPXRXAPXXPPP 832
PP PP P PPPP AP PPP
Sbjct: 177 PPTTKAPPPPTTKAPPPPTTKAPPPPTTKAP--PPP 210
>Z72502-7|CAA96592.1| 140|Caenorhabditis elegans Hypothetical
protein C08B6.10 protein.
Length = 140
Score = 29.1 bits (62), Expect = 4.2
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 776 PYXXXPPPPXRXAPXXPPPP 835
P+ PPPP P PPPP
Sbjct: 115 PWWRRPPPPWGPPPPGPPPP 134
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/42 (35%), Positives = 15/42 (35%), Gaps = 3/42 (7%)
Frame = +2
Query: 725 PPXXXXXPPAXXSXXXXPYXXXPPPPXRXAPXXP---PPPSP 841
PP PP P PPPP R P PPP P
Sbjct: 327 PPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPP 368
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/43 (34%), Positives = 15/43 (34%), Gaps = 4/43 (9%)
Frame = +2
Query: 725 PPXXXXXPPAXXSXXXXPYXXXPPPPXRXAP----XXPPPPSP 841
PP P P PPPP R P PPPP P
Sbjct: 297 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPP 339
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
Frame = +2
Query: 779 YXXXPPPPXRXAPXXPP-PPSP 841
Y PPPP P PP PP+P
Sbjct: 260 YPPVPPPPPSVTPMPPPMPPTP 281
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +2
Query: 725 PPXXXXXPPAXXSXXXXPYXXXPPPPXRXAPXXPPPPSP 841
PP P A P PP P PPPP P
Sbjct: 349 PPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPPP 387
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +2
Query: 725 PPXXXXXPPAXXSXXXXPYXXXPPPPXRXAPXXPPPPSP 841
PP PP P PP P R P PP P P
Sbjct: 143 PPRVPRTPPPRSPPPRRP-PMTPPSPQRRPPRTPPSPEP 180
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 791 PPPPXRXAPXXPPPPSP 841
PPPP P PPP SP
Sbjct: 139 PPPPPPRVPRTPPPRSP 155
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/42 (35%), Positives = 15/42 (35%), Gaps = 3/42 (7%)
Frame = +2
Query: 725 PPXXXXXPPAXXSXXXXPYXXXPPPPXRXAPXXP---PPPSP 841
PP PP P PPPP R P PPP P
Sbjct: 337 PPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPP 378
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/43 (34%), Positives = 15/43 (34%), Gaps = 4/43 (9%)
Frame = +2
Query: 725 PPXXXXXPPAXXSXXXXPYXXXPPPPXRXAP----XXPPPPSP 841
PP P P PPPP R P PPPP P
Sbjct: 307 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPP 349
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
Frame = +2
Query: 779 YXXXPPPPXRXAPXXPP-PPSP 841
Y PPPP P PP PP+P
Sbjct: 270 YPPVPPPPPSVTPMPPPMPPTP 291
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +2
Query: 725 PPXXXXXPPAXXSXXXXPYXXXPPPPXRXAPXXPPPPSP 841
PP P A P PP P PPPP P
Sbjct: 359 PPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPPP 397
>AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin family
protein 10 protein.
Length = 2302
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Frame = +2
Query: 776 PYXXXPPPP-XRXAPXXPPPPSPXXIA 853
P PPPP P PPPP P IA
Sbjct: 2274 PNLIPPPPPGYMHTPPLPPPPPPMAIA 2300
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 746 PPAXXSXXXXPYXXXPPPPXRXAPXXPPPPS 838
PP P PPPP PPPPS
Sbjct: 756 PPPPFGRGAGPMSSFPPPPRGGMHHMPPPPS 786
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +2
Query: 776 PYXXXPPPPXRXAPXXPPPPSP 841
PY PPP + PPPP P
Sbjct: 719 PYPGPPPPQQQRGYGYPPPPQP 740
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +2
Query: 776 PYXXXPPPPXRXAPXXPPPPSP 841
PY PPP + PPPP P
Sbjct: 719 PYPGPPPPQQQRGYGYPPPPQP 740
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 794 PPPXRXAPXXPPPPSP 841
PPP AP PPPP P
Sbjct: 134 PPPTPAAPPPPPPPPP 149
>U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical
protein T23B3.5 protein.
Length = 211
Score = 27.9 bits (59), Expect = 9.8
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 791 PPPPXRXAPXXPPPPSP 841
PPPP + PPPP+P
Sbjct: 29 PPPPKSASKMGPPPPAP 45
>U40802-3|AAM81105.1| 369|Caenorhabditis elegans Dense body protein
1, isoform b protein.
Length = 369
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +2
Query: 776 PYXXXPPPPXRXAPXXPPPPSP 841
P PPPP +P PPP P
Sbjct: 145 PAPPRPPPPVELSPPPRPPPPP 166
>U40802-2|AAM81104.1| 1010|Caenorhabditis elegans Dense body protein
1, isoform a protein.
Length = 1010
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +2
Query: 776 PYXXXPPPPXRXAPXXPPPPSP 841
P PPPP +P PPP P
Sbjct: 786 PAPPRPPPPVELSPPPRPPPPP 807
>U40802-1|AAM81106.1| 999|Caenorhabditis elegans Dense body protein
1, isoform c protein.
Length = 999
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +2
Query: 776 PYXXXPPPPXRXAPXXPPPPSP 841
P PPPP +P PPP P
Sbjct: 786 PAPPRPPPPVELSPPPRPPPPP 807
>J04804-1|AAA28002.1| 1010|Caenorhabditis elegans protein (
C.elegans vinculin (deb-1) gene, complete cds. ).
Length = 1010
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +2
Query: 776 PYXXXPPPPXRXAPXXPPPPSP 841
P PPPP +P PPP P
Sbjct: 786 PAPPRPPPPVELSPPPRPPPPP 807
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = -1
Query: 840 GEGGGGXXGAXRXGGGGXCX*GXXXXXWXAGGXXXXXGG 724
G GGGG G+ GGG W GG GG
Sbjct: 220 GGGGGGGYGSGGGWGGGGGGRDRDRGGWGGGGGGRGYGG 258
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/44 (34%), Positives = 15/44 (34%), Gaps = 6/44 (13%)
Frame = +2
Query: 725 PPXXXXXPPAXXSXXXXPYXXXP------PPPXRXAPXXPPPPS 838
PP PP PY P PPP P PPP S
Sbjct: 100 PPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPPFSVPPSVPPPTS 143
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/44 (34%), Positives = 15/44 (34%), Gaps = 6/44 (13%)
Frame = +2
Query: 725 PPXXXXXPPAXXSXXXXPYXXXP------PPPXRXAPXXPPPPS 838
PP PP PY P PPP P PPP S
Sbjct: 123 PPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPPFSVPPSVPPPTS 166
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/44 (34%), Positives = 15/44 (34%), Gaps = 6/44 (13%)
Frame = +2
Query: 725 PPXXXXXPPAXXSXXXXPYXXXP------PPPXRXAPXXPPPPS 838
PP PP PY P PPP P PPP S
Sbjct: 373 PPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPPFSVPPSVPPPTS 416
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/44 (31%), Positives = 16/44 (36%), Gaps = 1/44 (2%)
Frame = +2
Query: 713 LXXTPPXXXXXPPAXXSXXXXPYXXXPPPP-XRXAPXXPPPPSP 841
L PP P + P PPPP + PPPP P
Sbjct: 1352 LTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPPP 1395
>AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical
protein E03H12.5 protein.
Length = 210
Score = 27.9 bits (59), Expect = 9.8
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 791 PPPPXRXAPXXPPPPSP 841
PPPP + PPPP+P
Sbjct: 29 PPPPKSASKMGPPPPAP 45
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +2
Query: 746 PPAXXSXXXXPYXXXPPPPXRXAPXXPPP 832
PP P PPPP P PPP
Sbjct: 42 PPCFDCPPPAPIFVAPPPPPCFGPACPPP 70
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,022,779
Number of Sequences: 27780
Number of extensions: 160761
Number of successful extensions: 2053
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1571
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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