Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_T7_I12
         (687 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0187 - 23411085-23411477,23411626-23411631                       31   0.65 
01_06_1224 - 35508842-35510404                                         28   8.0  

>04_04_0187 - 23411085-23411477,23411626-23411631
          Length = 132

 Score = 31.5 bits (68), Expect = 0.65
 Identities = 11/35 (31%), Positives = 15/35 (42%)
 Frame = +1

Query: 379 PPXNXXFWPPXXXXPPPXXXEKXXFXXFFFXPPPP 483
           P     +WPP    PP     K  +  + + PPPP
Sbjct: 84  PECKPCYWPPYWCPPPEDPTCKPCYPRYSYAPPPP 118


>01_06_1224 - 35508842-35510404
          Length = 520

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 13/36 (36%), Positives = 14/36 (38%)
 Frame = +1

Query: 379 PPXNXXFWPPXXXXPPPXXXEKXXFXXFFFXPPPPL 486
           PP +    PP    P P   E      F   PPPPL
Sbjct: 49  PPASETHLPPYAPPPAPVVSELPDDLEFGLHPPPPL 84


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,331,538
Number of Sequences: 37544
Number of extensions: 399977
Number of successful extensions: 690
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 651
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)