Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_I09
(795 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0785 + 21190002-21190253,21190452-21190523,21191498-211916... 44 1e-04
08_01_0002 - 20208-20594,21525-21671,21754-21917,22005-22162,245... 42 7e-04
02_04_0346 - 22183145-22183264,22183877-22183966,22184140-221842... 42 7e-04
06_03_0875 - 25584789-25585307,25585424-25585570,25585734-255858... 41 0.001
11_06_0334 + 22437187-22437322,22437430-22437515,22437927-224380... 40 0.002
01_06_1646 - 38887178-38887271,38888230-38888270,38888744-388888... 39 0.004
10_08_0403 - 17635530-17635578,17635737-17635820,17636110-176362... 36 0.037
02_01_0256 + 1680240-1680485,1680950-1681024,1681527-1681776,168... 36 0.049
05_07_0040 + 27243195-27243428,27243665-27243736,27243837-272439... 33 0.20
01_05_0670 - 24159922-24160014,24160127-24160410,24160856-241609... 33 0.20
09_02_0536 + 10354538-10354693,10357407-10357684,10357717-10357852 33 0.35
06_02_0243 - 13433276-13434154,13434192-13434593,13434730-13434750 33 0.35
01_05_0407 - 21883009-21883950 32 0.60
08_02_0523 + 18150425-18150629,18150822-18150881,18150882-181509... 31 0.80
05_03_0659 - 16715437-16715520,16715607-16715714,16715788-167158... 31 0.80
01_06_0093 + 26385471-26385740,26385842-26385934,26386526-263865... 31 0.80
01_02_0112 - 11230202-11230282,11230362-11230469,11230588-112306... 31 0.80
09_06_0084 - 20755365-20755931 31 1.4
01_05_0220 - 19434011-19434802 30 1.8
06_03_1117 + 27750291-27750338,27751360-27751812,27751987-277521... 30 2.4
02_05_0239 + 27101440-27101904 29 3.2
12_01_0311 + 2345492-2346325 29 5.6
07_03_0319 - 16745161-16745205,16745304-16745370,16745593-16745741 28 7.4
03_05_0677 + 26663880-26664581 28 7.4
12_01_0312 + 2349696-2350424 28 9.8
06_01_0612 - 4429605-4431152 28 9.8
04_03_0011 - 9347942-9348289 28 9.8
03_06_0557 + 34704990-34705400,34706271-34706485,34707142-347073... 28 9.8
02_04_0467 + 23161572-23162757,23162856-23163418 28 9.8
02_01_0486 - 3495792-3496034,3496862-3496934,3497128-3497422,349... 28 9.8
>08_02_0785 +
21190002-21190253,21190452-21190523,21191498-21191631,
21191700-21191850,21191938-21192087
Length = 252
Score = 44.4 bits (100), Expect = 1e-04
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = -3
Query: 679 CWXCYDSSRAEPLIRPCRCTGDVSAVHHDCLSRWLVESAASPDGLKCKVCNTPY 518
C C + L PC CTG + H C+ RW E L C++C+ PY
Sbjct: 61 CRICQEEDNISNLESPCACTGSLKYAHRACVQRWCDEKG----DLTCEICHEPY 110
>08_01_0002 -
20208-20594,21525-21671,21754-21917,22005-22162,
24533-24826,24916-25121,25216-25812,26366-27097
Length = 894
Score = 41.5 bits (93), Expect = 7e-04
Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -3
Query: 679 CWXCYDSSRA-EPLIRPCRCTGDVSAVHHDCLSRWLVESAASPDGLKCKVC 530
C C + A PL PC C G + VH DCL RWL S C+VC
Sbjct: 30 CRICRVPAEAGRPLRHPCACRGSIRFVHDDCLLRWLATRRTS----HCEVC 76
>02_04_0346 -
22183145-22183264,22183877-22183966,22184140-22184220,
22184430-22184589,22184723-22184787,22185370-22185441,
22186163-22186327
Length = 250
Score = 41.5 bits (93), Expect = 7e-04
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = -3
Query: 679 CWXCYDSSRAEPLIRPCRCTGDVSAVHHDCLSRWLVESAASPDGLKCKVCNTPY 518
C C + A+ L PC C+G + H +C+ RW E + C++C+ Y
Sbjct: 32 CRICQEEDLAKNLESPCACSGSLKYAHRECVQRWCNEKG----DIICEICHVSY 81
>06_03_0875 -
25584789-25585307,25585424-25585570,25585734-25585897,
25586015-25586172,25586536-25586904,25586998-25587209,
25587439-25588059,25588561-25588699,25588968-25589044,
25589120-25589800,25590641-25590889
Length = 1111
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -3
Query: 679 CWXCYDSSRAE-PLIRPCRCTGDVSAVHHDCLSRWLVESAASPDGLKCKVC 530
C C + E PL PC C+G + VH DCL +WL S + +C+VC
Sbjct: 39 CRICRNPGDDEHPLRYPCACSGSIKFVHQDCLLQWLDHS----NSRQCEVC 85
>11_06_0334 +
22437187-22437322,22437430-22437515,22437927-22438073,
22438166-22438274,22439510-22439633,22439727-22439752,
22439774-22440000,22440084-22440185
Length = 318
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/62 (29%), Positives = 24/62 (38%)
Frame = -3
Query: 694 GSSXXCWXCYDSSRAEPLIRPCRCTGDVSAVHHDCLSRWLVESAASPDGLKCKVCNTPYI 515
G C C ++ + I PC+C G VH DCL W C C PY
Sbjct: 33 GDQFQCRICLETDGRD-FIAPCKCKGTSKYVHRDCLDHWRAVKEGFAFS-HCTTCKAPYY 90
Query: 514 VQ 509
++
Sbjct: 91 LR 92
>01_06_1646 -
38887178-38887271,38888230-38888270,38888744-38888827,
38888933-38889080,38889232-38889299,38889563-38889634,
38890479-38890673
Length = 233
Score = 39.1 bits (87), Expect = 0.004
Identities = 15/54 (27%), Positives = 23/54 (42%)
Frame = -3
Query: 679 CWXCYDSSRAEPLIRPCRCTGDVSAVHHDCLSRWLVESAASPDGLKCKVCNTPY 518
C C + + PC CTG + H C+ RW + + C++CN Y
Sbjct: 42 CRICQEEGDEGAMDSPCACTGTLKFAHRKCIQRWCDKKG----NITCEICNQVY 91
>10_08_0403 -
17635530-17635578,17635737-17635820,17636110-17636219,
17637507-17637638,17638497-17638576,17638877-17639008,
17639534-17639648,17640244-17640286,17640359-17640493,
17641347-17641414,17641473-17641478
Length = 317
Score = 35.9 bits (79), Expect = 0.037
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -3
Query: 649 EPLIR-PCRCTGDVSAVHHDCLSRWLVESAASPDGLKCKVC 530
EPL+ CRC GD+S H C+S W ++ KC++C
Sbjct: 33 EPLVDLGCRCRGDLSKAHRTCISVWFRTRGSN----KCEIC 69
>02_01_0256 +
1680240-1680485,1680950-1681024,1681527-1681776,
1681910-1681995,1682669-1682771,1683490-1683602,
1684259-1684351
Length = 321
Score = 35.5 bits (78), Expect = 0.049
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -3
Query: 679 CWXCYDSSRAEPLIRPCRCTGDVSAVHHDCLSRW 578
C C D+ + LI PC C G VH CL W
Sbjct: 183 CRICLDNE-GDDLIAPCHCKGTQKYVHRSCLDNW 215
>05_07_0040 +
27243195-27243428,27243665-27243736,27243837-27243904,
27243987-27244113,27244514-27244669
Length = 218
Score = 33.5 bits (73), Expect = 0.20
Identities = 15/54 (27%), Positives = 22/54 (40%)
Frame = -3
Query: 679 CWXCYDSSRAEPLIRPCRCTGDVSAVHHDCLSRWLVESAASPDGLKCKVCNTPY 518
C C + + PC C G + H C+ RW E D + C++C Y
Sbjct: 55 CRICQEEDDQTYMETPCSCRGSLKYAHRKCIQRWCDEKG---DTI-CEICLQQY 104
>01_05_0670 -
24159922-24160014,24160127-24160410,24160856-24160979,
24161174-24161320,24161752-24161837,24162039-24162234
Length = 309
Score = 33.5 bits (73), Expect = 0.20
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = -3
Query: 691 SSXXCWXCYDSSR--AEPLIRPCRCTGDVSAVHHDCLSRW 578
S+ C C +S + LI PC C G VH CL W
Sbjct: 51 SAACCRICLESETEPGDELISPCMCKGTQQFVHRYCLDHW 90
>09_02_0536 + 10354538-10354693,10357407-10357684,10357717-10357852
Length = 189
Score = 32.7 bits (71), Expect = 0.35
Identities = 23/53 (43%), Positives = 28/53 (52%)
Frame = +2
Query: 449 RGARPVRPREPALPLHTIGLLDDVGSVADFALQAVRRGGTLDEPPAQAVMMHG 607
RGA RPR PAL G+ D G+V D A + RR G DE Q V++ G
Sbjct: 138 RGATGDRPRAPALLSFVRGMYDR-GNVLDAADE--RRNGVFDERQMQRVLVIG 187
>06_02_0243 - 13433276-13434154,13434192-13434593,13434730-13434750
Length = 433
Score = 32.7 bits (71), Expect = 0.35
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -3
Query: 631 CRCTGDVSAVHHDCLSRWL-VESAASPDGLKCKVCNTPYIVQETN 500
CRC G+++ H DC +W ++ A+ D +V N P ++ +
Sbjct: 285 CRCKGELALAHGDCAVKWFSIKGNATCDVCNHEVLNLPVTLRRVH 329
>01_05_0407 - 21883009-21883950
Length = 313
Score = 31.9 bits (69), Expect = 0.60
Identities = 26/72 (36%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Frame = +2
Query: 440 DGGRGA----RPVRPREP-ALPLHTIGLLDDVGSVADFALQAVRRGGTLDEPPAQAVMMH 604
DGG GA R RPR+P +LP+ VGS + LQ GG PPA V H
Sbjct: 244 DGGGGAVVRWRSYRPRQPRSLPMTRSNSFAGVGSRS---LQLQGGGGASRPPPAADVPFH 300
Query: 605 GGHVAGAATRPD 640
G A + +
Sbjct: 301 LGRTASLPAKDE 312
>08_02_0523 +
18150425-18150629,18150822-18150881,18150882-18150967,
18151802-18151948,18152712-18152835,18152990-18153366
Length = 332
Score = 31.5 bits (68), Expect = 0.80
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -3
Query: 649 EPLIRPCRCTGDVSAVHHDCLSRW 578
+ LI PC C G VH CL W
Sbjct: 90 DELISPCMCKGTQQFVHRSCLDHW 113
>05_03_0659 -
16715437-16715520,16715607-16715714,16715788-16715871,
16715963-16716095,16717051-16717118,16717528-16717599,
16717771-16717843,16718038-16718057
Length = 213
Score = 31.5 bits (68), Expect = 0.80
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -3
Query: 634 PCRCTGDVSAVHHDCLSRWLVESAASPDGLKCKVC 530
PC C+G + H C+ RW E ++ C++C
Sbjct: 23 PCGCSGSLKYAHRGCVQRWCDEKGST----LCEIC 53
>01_06_0093 +
26385471-26385740,26385842-26385934,26386526-26386591,
26386872-26387012,26387465-26387692,26387808-26387925,
26387993-26388132,26388259-26388426,26388520-26388675,
26388773-26389138
Length = 581
Score = 31.5 bits (68), Expect = 0.80
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = -1
Query: 651 RSPSSGRVAAPATCPPCIMTA*AGGSSR---VPPRLTA*SAKSATLPT 517
+S ++G V+ PA PPC + A AGG R V ++++ AT+P+
Sbjct: 23 KSAAAGSVSFPAAQPPCPLAASAGGRRRRGAVAAKVSSPQVIGATMPS 70
>01_02_0112 -
11230202-11230282,11230362-11230469,11230588-11230671,
11230791-11230920,11231864-11231931,11232412-11232483,
11232670-11232705
Length = 192
Score = 31.5 bits (68), Expect = 0.80
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -3
Query: 634 PCRCTGDVSAVHHDCLSRWLVESAASPDGLKCKVC 530
PC C+G + H C+ RW E ++ C++C
Sbjct: 4 PCGCSGSLKYAHRGCVQRWCDEKGST----LCEIC 34
>09_06_0084 - 20755365-20755931
Length = 188
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/65 (27%), Positives = 25/65 (38%)
Frame = -3
Query: 703 DSVGSSXXCWXCYDSSRAEPLIRPCRCTGDVSAVHHDCLSRWLVESAASPDGLKCKVCNT 524
D G S C C A +R G H +C+ RWL+ A + C VC
Sbjct: 87 DEEGGSGDCAVCLAEYAAGDEVRVLPACGH--GFHRECVDRWLLTRAPT-----CPVCRA 139
Query: 523 PYIVQ 509
P + +
Sbjct: 140 PVVAR 144
>01_05_0220 - 19434011-19434802
Length = 263
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = -3
Query: 694 GSSXXCWXCYDSSRAEPLIRPCRCTGDVSAVHHDCLSRWLVESAASP 554
G+ C C D A+ L P R A H C++ WL+E P
Sbjct: 180 GAGKPCGICLDDLDADGLTTPVRLPCG-HAFHGQCIAGWLLEGRTCP 225
>06_03_1117 +
27750291-27750338,27751360-27751812,27751987-27752161,
27752227-27752551,27752705-27752786,27752820-27752889,
27753341-27753420,27753514-27753750
Length = 489
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = -3
Query: 649 EPLIRPCRCTGDVSAVHHDCLSRWL-VESAASPDGLKCKVCNTP 521
E L C C G+++ H DC +W ++ D K +V N P
Sbjct: 263 ETLKMECSCKGELALAHQDCAVKWFSIKGNKICDVCKQEVQNLP 306
>02_05_0239 + 27101440-27101904
Length = 154
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/51 (37%), Positives = 22/51 (43%)
Frame = -3
Query: 679 CWXCYDSSRAEPLIRPCRCTGDVSAVHHDCLSRWLVESAASPDGLKCKVCN 527
C C D A +R G A H DC+ RWL SP +C VCN
Sbjct: 91 CPICLDGMEAGRAVRVL--PGCSRAFHQDCVDRWL---TISP---RCPVCN 133
>12_01_0311 + 2345492-2346325
Length = 277
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/64 (25%), Positives = 26/64 (40%)
Frame = -3
Query: 745 HHHDAKNVERNSFVDSVGSSXXCWXCYDSSRAEPLIRPCRCTGDVSAVHHDCLSRWLVES 566
H D + + ++ S+ C C + A + C G+ S HH C++ WL S
Sbjct: 195 HQFDHHGGDDDDDDEAKDSAAGCVICMEEFVAGDEVCAIPCAGNHS-FHHHCITEWLGRS 253
Query: 565 AASP 554
P
Sbjct: 254 NVCP 257
>07_03_0319 - 16745161-16745205,16745304-16745370,16745593-16745741
Length = 86
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = -1
Query: 654 GRSPSSGRVAAPATCPPCIMTA*AGGSSR 568
GR GR AP PPC TA GG +R
Sbjct: 15 GRKTQGGR--APTPLPPCAATAEIGGKNR 41
>03_05_0677 + 26663880-26664581
Length = 233
Score = 28.3 bits (60), Expect = 7.4
Identities = 22/70 (31%), Positives = 33/70 (47%)
Frame = -3
Query: 703 DSVGSSXXCWXCYDSSRAEPLIRPCRCTGDVSAVHHDCLSRWLVESAASPDGLKCKVCNT 524
D+ G S C C++ + EP++ C G + C+ RWL A SP+ C VC
Sbjct: 16 DAAGGSFECNICFELPQ-EPIVTLC---GHLFC--WPCIYRWLHIHAHSPE---CPVCKA 66
Query: 523 PYIVQETNRV 494
+V+E V
Sbjct: 67 --VVEEDKLV 74
>12_01_0312 + 2349696-2350424
Length = 242
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/66 (25%), Positives = 27/66 (40%)
Frame = -3
Query: 745 HHHDAKNVERNSFVDSVGSSXXCWXCYDSSRAEPLIRPCRCTGDVSAVHHDCLSRWLVES 566
H D + + ++ S+ C C + A + C G+ S HH C++ WL S
Sbjct: 163 HQFDHHGGDDDDDDEAKDSAAGCVICMEEFVAGDEVCAIPCAGNHS-FHHHCITEWLGCS 221
Query: 565 AASPDG 548
P G
Sbjct: 222 NVCPLG 227
>06_01_0612 - 4429605-4431152
Length = 515
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/44 (38%), Positives = 19/44 (43%)
Frame = +2
Query: 458 RPVRPREPALPLHTIGLLDDVGSVADFALQAVRRGGTLDEPPAQ 589
RP E H G DDV AD AV +GG D+P Q
Sbjct: 182 RPHVGVEGGAEFHVPGFPDDVRITADEVPDAVIQGGNPDDPVTQ 225
>04_03_0011 - 9347942-9348289
Length = 115
Score = 27.9 bits (59), Expect = 9.8
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
Frame = -3
Query: 694 GSSXXCWXCYDSSRAEPLIR--PCRCTGDVSAVHHDCLSRWLVESAASPDGLKCKVCNTP 521
G C C R R PCR A H DC+ RWL+ + C +C
Sbjct: 30 GGLTECSVCLSRIRVGEATRRLPCR-----HAFHRDCVDRWLLSCRRT-----CPLCRV- 78
Query: 520 YIVQETNR 497
Y+V + N+
Sbjct: 79 YVVVDGNK 86
>03_06_0557 +
34704990-34705400,34706271-34706485,34707142-34707367,
34707447-34707532,34708030-34708121,34708232-34708471,
34709455-34709750
Length = 521
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -1
Query: 657 PGRSPSSGRVAAPATCPPCIMTA*AGGS 574
P SP SGR A A PP ++ A A G+
Sbjct: 44 PSPSPRSGRHKAAAAAPPAVVAAAAVGA 71
>02_04_0467 + 23161572-23162757,23162856-23163418
Length = 582
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = -3
Query: 694 GSSXXCWXCYDSSRAEPLIRPCRCTGDVSAVHHDCLSRW--LVESAASP 554
G C D R+ + PCRC D +A D ++W LV S SP
Sbjct: 518 GGGLLCLDVGDDGRSV-VTNPCRCLDDAAAGECDPETQWFKLVTSTRSP 565
>02_01_0486 -
3495792-3496034,3496862-3496934,3497128-3497422,
3497585-3497759,3498349-3498795,3499994-3500053
Length = 430
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -3
Query: 649 EPLIRPCRCTGDVSAVHHDCLSRWL-VESAASPDGLKCKVCNTP 521
E L C C G+++ H +C +W ++ + D + +V N P
Sbjct: 255 ETLKLECSCKGELALAHQECAIKWFSIKGNKTCDVCRQEVQNLP 298
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,300,859
Number of Sequences: 37544
Number of extensions: 287309
Number of successful extensions: 991
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 991
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2150667972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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