Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_T7_I09
         (795 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006624-2|AAF39784.2|  254|Caenorhabditis elegans Hypothetical ...    48   1e-05
Z36948-1|CAA85409.1|  180|Caenorhabditis elegans Hypothetical pr...    47   2e-05
Z49968-3|CAA90260.1|  189|Caenorhabditis elegans Hypothetical pr...    46   3e-05
AL032647-1|CAA21688.2|  470|Caenorhabditis elegans Hypothetical ...    46   4e-05
Z81037-7|CAB02744.2|  431|Caenorhabditis elegans Hypothetical pr...    44   1e-04
Z70754-2|CAC42308.1|  764|Caenorhabditis elegans Hypothetical pr...    40   0.002
Z70754-1|CAA94771.2|  966|Caenorhabditis elegans Hypothetical pr...    40   0.002
AF164113-1|AAD45535.1|  810|Caenorhabditis elegans zinc finger p...    40   0.002
AC006644-6|AAZ91358.1|  958|Caenorhabditis elegans Hypothetical ...    40   0.003
Z81131-1|CAB03423.4|  464|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z82075-1|CAB04930.1|  320|Caenorhabditis elegans Hypothetical pr...    28   6.7  

>AC006624-2|AAF39784.2|  254|Caenorhabditis elegans Hypothetical
           protein C53D5.2 protein.
          Length = 254

 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
 Frame = -3

Query: 691 SSXXCWXCYDSS--RAEPLIRPCRCTGDVSAVHHDCLSRWL-VESAASPDGLKCKVCNTP 521
           S+  C  C+ S+  R+ PLI PCRC+G +  VH  C+ RWL + +       +C++C   
Sbjct: 13  SANMCRICHTSTSTRSNPLISPCRCSGTLLFVHKACVVRWLEMSTRKMVPSPRCELCGYD 72

Query: 520 Y 518
           Y
Sbjct: 73  Y 73


>Z36948-1|CAA85409.1|  180|Caenorhabditis elegans Hypothetical
           protein D2089.2 protein.
          Length = 180

 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
 Frame = -3

Query: 679 CWXCYDS-SRAEPLIRPCRCTGDVSAVHHDCLSRWLVESAASPDGLKCKVCNTPYIVQET 503
           C  C+D+ + ++ LI+PC C+G V+ VH+ CL +W+     +   ++C +C   + +   
Sbjct: 25  CRICFDNDTSSDSLIKPCSCSGTVAYVHNGCLEQWV----RTTSNIQCTICQDMFELIPA 80

Query: 502 NRVEWER 482
              +W +
Sbjct: 81  GLKDWNK 87


>Z49968-3|CAA90260.1|  189|Caenorhabditis elegans Hypothetical
           protein M110.3 protein.
          Length = 189

 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
 Frame = -3

Query: 679 CWXCY--DSSRAEPLIRPCRCTGDVSAVHHDCLSRWLVESAASPDGLKCKVCNTPYIVQE 506
           C  C+  +S  A   + PCRC G +  VHH CL+ W    A +   + C  C T Y  Q 
Sbjct: 16  CKFCFGTESDNALSFVHPCRCRGSIHWVHHQCLAMWF-SKANAVQQVMCIQCQTRYQKQL 74

Query: 505 T 503
           T
Sbjct: 75  T 75


>AL032647-1|CAA21688.2|  470|Caenorhabditis elegans Hypothetical
           protein Y57A10B.1 protein.
          Length = 470

 Score = 45.6 bits (103), Expect = 4e-05
 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = -3

Query: 679 CWXCYDSSRAEPLIRPCRCTGDVSAVHHDCLSRWL-VESAASPDGLKCKVCNTPY 518
           C  C+     +PLI PCRC+G +  VH  CL  WL + S        C++C   Y
Sbjct: 197 CHCCWPPDSNDPLISPCRCSGSLQYVHVSCLMHWLDISSRKLHRPAICELCLYKY 251


>Z81037-7|CAB02744.2|  431|Caenorhabditis elegans Hypothetical
           protein C17E4.3 protein.
          Length = 431

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 16/51 (31%), Positives = 29/51 (56%)
 Frame = -3

Query: 649 EPLIRPCRCTGDVSAVHHDCLSRWLVESAASPDGLKCKVCNTPYIVQETNR 497
           EPLI PC+C+G +   H  CL  WL  ++ +     C++C   + +++ +R
Sbjct: 32  EPLISPCKCSGTMGLFHRSCLEHWLTLTSTT----NCEICKFAFKIKQKSR 78


>Z70754-2|CAC42308.1|  764|Caenorhabditis elegans Hypothetical
           protein F58E6.1b protein.
          Length = 764

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
 Frame = -3

Query: 712 SFVDSV--GSSXXCWXCYDSSRAEPLIRPCRCTGDVSAVHHDCLSRWLVESAASPDGLKC 539
           SF +S   GS   C  C        ++RPC C G +  VH +CL++W+  S    +   C
Sbjct: 39  SFSESTTSGSRRICRIC--QMHEGDMVRPCDCAGTMGDVHEECLTKWVNMS----NKKTC 92

Query: 538 KVCNTPY 518
           ++C + Y
Sbjct: 93  EICKSEY 99


>Z70754-1|CAA94771.2|  966|Caenorhabditis elegans Hypothetical
           protein F58E6.1a protein.
          Length = 966

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
 Frame = -3

Query: 712 SFVDSV--GSSXXCWXCYDSSRAEPLIRPCRCTGDVSAVHHDCLSRWLVESAASPDGLKC 539
           SF +S   GS   C  C        ++RPC C G +  VH +CL++W+  S    +   C
Sbjct: 39  SFSESTTSGSRRICRIC--QMHEGDMVRPCDCAGTMGDVHEECLTKWVNMS----NKKTC 92

Query: 538 KVCNTPY 518
           ++C + Y
Sbjct: 93  EICKSEY 99


>AF164113-1|AAD45535.1|  810|Caenorhabditis elegans zinc finger
           protein STAT-B protein.
          Length = 810

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
 Frame = -3

Query: 712 SFVDSV--GSSXXCWXCYDSSRAEPLIRPCRCTGDVSAVHHDCLSRWLVESAASPDGLKC 539
           SF +S   GS   C  C        ++RPC C G +  VH +CL++W+  S    +   C
Sbjct: 85  SFSESTTSGSRRICRIC--QMHEGDMVRPCDCAGTMGDVHEECLTKWVNMS----NKKTC 138

Query: 538 KVCNTPY 518
           ++C + Y
Sbjct: 139 EICKSEY 145


>AC006644-6|AAZ91358.1|  958|Caenorhabditis elegans Hypothetical
           protein F55A3.1 protein.
          Length = 958

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 19/49 (38%), Positives = 23/49 (46%)
 Frame = -3

Query: 643 LIRPCRCTGDVSAVHHDCLSRWLVESAASPDGLKCKVCNTPYIVQETNR 497
           L  PC CTG +  VH +CL  WL  S        C++CN  Y  Q   R
Sbjct: 63  LYYPCLCTGSIKYVHQECLVEWLKYSKKE----VCELCNHKYSFQPIYR 107


>Z81131-1|CAB03423.4|  464|Caenorhabditis elegans Hypothetical
           protein T24D1.2 protein.
          Length = 464

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
 Frame = -3

Query: 652 AEPLIRPCRCTGDVSAVH-HDCLSRWLVESAASPDGLKCKVCNTPY 518
           + P I+P  C   +  +   DC+ RW      S +G  C +C  P+
Sbjct: 378 SNPPIKPQGCKKCLQFLGCTDCVRRWYAARKGSMEGSSCPLCRAPW 423


>Z82075-1|CAB04930.1|  320|Caenorhabditis elegans Hypothetical
           protein W07A8.1 protein.
          Length = 320

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +3

Query: 168 TSFGAISTVTVLLMVDS*PCSESWTSAKGSVRIFR 272
           T FG I  V   +MVD+ P SE W S  G    +R
Sbjct: 52  TGFGIIEKVNNFIMVDAWPISE-WWSPNGGYEKYR 85


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,856,526
Number of Sequences: 27780
Number of extensions: 212495
Number of successful extensions: 709
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 709
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)