Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_I05
(837 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y17397-1|CAA76763.1| 1690|Homo sapiens collagen alpha 4 type IV ... 34 0.56
X81053-1|CAA56943.1| 1690|Homo sapiens type IV collagen alpha 4 ... 34 0.56
M65158-1|AAA96439.1| 625|Homo sapiens type VII collagen protein. 34 0.56
L23982-1|AAA58965.1| 2912|Homo sapiens collagen type VII protein. 34 0.56
L02870-1|AAA75438.1| 2944|Homo sapiens alpha-1 type VII collagen... 34 0.56
AC079235-1|AAY14670.1| 1324|Homo sapiens unknown protein. 34 0.56
X98411-1|CAA67058.1| 782|Homo sapiens myosin-IF protein. 32 2.2
BC082760-1|AAH82760.1| 1062|Homo sapiens ATXN2L protein protein. 32 2.2
AY082886-1|AAL92872.1| 1600|Homo sapiens eukaryotic translation ... 32 2.2
AJ317974-1|CAC38072.3| 1044|Homo sapiens ataxin-2 related domain... 32 2.2
AJ317973-1|CAC38071.3| 1044|Homo sapiens ataxin-2 related domain... 32 2.2
AJ317972-1|CAC38070.3| 1097|Homo sapiens ataxin-2 related domain... 32 2.2
AJ317971-1|CAC38069.3| 1062|Homo sapiens ataxin-2 related domain... 32 2.2
AJ317970-1|CAC38068.1| 1075|Homo sapiens ataxin-2 related domain... 32 2.2
AF281070-2|AAM69365.1| 1600|Homo sapiens eukaryotic translation ... 32 2.2
AF002816-1|AAC78443.1| 177|Homo sapiens eucaryotic translation ... 32 2.2
D43951-1|BAA07895.3| 1175|Homo sapiens KIAA0099 protein protein. 32 3.0
BC013398-1|AAH13398.1| 1186|Homo sapiens pumilio homolog 1 (Dros... 32 3.0
AL445235-5|CAI22249.1| 1224|Homo sapiens pumilio homolog 1 (Dros... 32 3.0
AL445235-4|CAI22248.1| 925|Homo sapiens pumilio homolog 1 (Dros... 32 3.0
AL445235-3|CAI22247.1| 1189|Homo sapiens pumilio homolog 1 (Dros... 32 3.0
AL445235-2|CAI22246.1| 1186|Homo sapiens pumilio homolog 1 (Dros... 32 3.0
AL356320-6|CAH71205.1| 1224|Homo sapiens pumilio homolog 1 (Dros... 32 3.0
AL356320-5|CAH71204.1| 925|Homo sapiens pumilio homolog 1 (Dros... 32 3.0
AL356320-4|CAH71202.1| 1189|Homo sapiens pumilio homolog 1 (Dros... 32 3.0
AL356320-3|CAH71203.1| 1186|Homo sapiens pumilio homolog 1 (Dros... 32 3.0
AL138752-6|CAI13878.1| 559|Homo sapiens WD repeat domain 32 pro... 32 3.0
AK222605-1|BAD96325.1| 1188|Homo sapiens pumilio homolog 1 varia... 32 3.0
AF315592-1|AAG31807.1| 1186|Homo sapiens Pumilio 1 protein. 32 3.0
BC150266-1|AAI50267.1| 1336|Homo sapiens mitogen-activated prote... 31 3.9
AL031718-1|CAB72318.1| 552|Homo sapiens c371H6.1 (KIAA0516 prot... 31 3.9
AL031717-1|CAM26394.1| 1336|Homo sapiens mitogen-activated prote... 31 3.9
AL031710-1|CAM26364.1| 1336|Homo sapiens mitogen-activated prote... 31 3.9
AK098358-1|BAC05291.1| 134|Homo sapiens protein ( Homo sapiens ... 31 3.9
AE006639-4|AAK61290.1| 1342|Homo sapiens similar to sperm specif... 31 3.9
AB028989-1|BAA83018.2| 1346|Homo sapiens KIAA1066 protein protein. 31 3.9
BC132918-1|AAI32919.1| 317|Homo sapiens similar to 4931415M17 p... 31 5.2
BC132916-1|AAI32917.1| 317|Homo sapiens similar to 4931415M17 p... 31 5.2
BC069238-1|AAH69238.1| 403|Homo sapiens zinc finger, CCHC domai... 31 5.2
AK131083-1|BAC85133.1| 500|Homo sapiens FLJ00283 protein protein. 31 5.2
AK097419-1|BAC05044.1| 271|Homo sapiens protein ( Homo sapiens ... 31 5.2
AB210013-1|BAE06095.1| 1624|Homo sapiens EIF4G1 variant protein ... 31 5.2
Z83131-1|CAI42019.1| 632|Homo sapiens armadillo repeat containi... 31 6.8
BC045732-1|AAH45732.1| 209|Homo sapiens LOC339742 protein protein. 31 6.8
BC015926-1|AAH15926.1| 632|Homo sapiens ARMCX2 protein protein. 31 6.8
BC012541-1|AAH12541.1| 632|Homo sapiens armadillo repeat contai... 31 6.8
AF104913-1|AAC82471.1| 1560|Homo sapiens eukaryotic protein synt... 31 6.8
AF002815-1|AAC78442.1| 230|Homo sapiens eucaryotic translation ... 31 6.8
AB011084-1|BAA25438.2| 710|Homo sapiens KIAA0512 protein protein. 31 6.8
X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing f... 30 9.0
BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor proline... 30 9.0
BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein. 30 9.0
BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein. 30 9.0
AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor proline... 30 9.0
AC073149-2|AAY24061.1| 365|Homo sapiens unknown protein. 30 9.0
>Y17397-1|CAA76763.1| 1690|Homo sapiens collagen alpha 4 type IV
protein.
Length = 1690
Score = 34.3 bits (75), Expect = 0.56
Identities = 29/81 (35%), Positives = 33/81 (40%)
Frame = +1
Query: 151 PLHSYTRRPISVRGQNPVRVGGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTA 330
P HS R + GQ + G+P S P + P D P G G P
Sbjct: 824 PGHSCERGAPGIPGQPGLP--GYPGSPGAPGGKGQPGDVGPPGPAGMKGLP--------- 872
Query: 331 ALPGRPGDAAGVPGYPAGPEP 393
LPGRPG A G PG P P P
Sbjct: 873 GLPGRPG-AHGPPGLPGIPGP 892
>X81053-1|CAA56943.1| 1690|Homo sapiens type IV collagen alpha 4 chain
protein.
Length = 1690
Score = 34.3 bits (75), Expect = 0.56
Identities = 29/81 (35%), Positives = 33/81 (40%)
Frame = +1
Query: 151 PLHSYTRRPISVRGQNPVRVGGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTA 330
P HS R + GQ + G+P S P + P D P G G P
Sbjct: 824 PGHSCERGAPGIPGQPGLP--GYPGSPGAPGGKGQPGDVGPPGPAGMKGLP--------- 872
Query: 331 ALPGRPGDAAGVPGYPAGPEP 393
LPGRPG A G PG P P P
Sbjct: 873 GLPGRPG-AHGPPGLPGIPGP 892
>M65158-1|AAA96439.1| 625|Homo sapiens type VII collagen protein.
Length = 625
Score = 34.3 bits (75), Expect = 0.56
Identities = 25/71 (35%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Frame = +1
Query: 187 RGQNPVRVG--GFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPGD-- 354
R NP G G S P R P + P G +G+ P + LPGR GD
Sbjct: 498 RAGNPGTPGAPGLKGSPGLPGPRGDPGERGPRGPKGEPGAPGQVIGGEGPGLPGRKGDPG 557
Query: 355 AAGVPGYPAGP 387
+G PG P GP
Sbjct: 558 PSGPPG-PRGP 567
>L23982-1|AAA58965.1| 2912|Homo sapiens collagen type VII protein.
Length = 2912
Score = 34.3 bits (75), Expect = 0.56
Identities = 25/71 (35%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Frame = +1
Query: 187 RGQNPVRVG--GFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPGD-- 354
R NP G G S P R P + P G +G+ P + LPGR GD
Sbjct: 1312 RAGNPGTPGAPGLKGSPGLPGPRGDPGERGPRGPKGEPGAPGQVIGGEGPGLPGRKGDPG 1371
Query: 355 AAGVPGYPAGP 387
+G PG P GP
Sbjct: 1372 PSGPPG-PRGP 1381
>L02870-1|AAA75438.1| 2944|Homo sapiens alpha-1 type VII collagen
protein.
Length = 2944
Score = 34.3 bits (75), Expect = 0.56
Identities = 25/71 (35%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Frame = +1
Query: 187 RGQNPVRVG--GFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPGD-- 354
R NP G G S P R P + P G +G+ P + LPGR GD
Sbjct: 1312 RAGNPGTPGAPGLKGSPGLPGPRGDPGERGPRGPKGEPGAPGQVIGGEGPGLPGRKGDPG 1371
Query: 355 AAGVPGYPAGP 387
+G PG P GP
Sbjct: 1372 PSGPPG-PRGP 1381
>AC079235-1|AAY14670.1| 1324|Homo sapiens unknown protein.
Length = 1324
Score = 34.3 bits (75), Expect = 0.56
Identities = 29/81 (35%), Positives = 33/81 (40%)
Frame = +1
Query: 151 PLHSYTRRPISVRGQNPVRVGGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTA 330
P HS R + GQ + G+P S P + P D P G G P
Sbjct: 824 PGHSCERGAPGIPGQPGLP--GYPGSPGAPGGKGQPGDVGPPGPAGMKGLP--------- 872
Query: 331 ALPGRPGDAAGVPGYPAGPEP 393
LPGRPG A G PG P P P
Sbjct: 873 GLPGRPG-AHGPPGLPGIPGP 892
>X98411-1|CAA67058.1| 782|Homo sapiens myosin-IF protein.
Length = 782
Score = 32.3 bits (70), Expect = 2.2
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +1
Query: 256 PEDARPTGRRGDSRRPTTSVSAVTAALPGRPG--DAAGVPGYPAGPEP 393
P++++PTG+ +P S A T A PG P D G P P G P
Sbjct: 603 PKNSKPTGKGLAKGKPRRSSQAPTRAAPGAPQGMDRNGAPLCPQGGAP 650
>BC082760-1|AAH82760.1| 1062|Homo sapiens ATXN2L protein protein.
Length = 1062
Score = 32.3 bits (70), Expect = 2.2
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 8/79 (10%)
Frame = +1
Query: 232 LQPDTRRHPEDAR--PTGRRGDSRRPTTSVSAVTAALPGRPGDAAGVPGYPA------GP 387
L+P + P + P ++ +RRP S LPG +A PG PA GP
Sbjct: 2 LKPQPLQQPSQPQQPPPTQQAVARRPPGGTSPPNGGLPGPLATSAAPPGPPAAASPCLGP 61
Query: 388 EPACRVGTRYTADRVALPQ 444
A G R A+ + PQ
Sbjct: 62 VAAAGSGLRRGAEGILAPQ 80
>AY082886-1|AAL92872.1| 1600|Homo sapiens eukaryotic translation
initiation factor 4GI protein.
Length = 1600
Score = 32.3 bits (70), Expect = 2.2
Identities = 20/55 (36%), Positives = 27/55 (49%)
Frame = +1
Query: 226 STLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPGDAAGVPGYPAGPE 390
ST Q P R ++ P+++ S V +A P RPG AA V YPAG +
Sbjct: 34 STPQATQMNTPSQPRQHFYPSRAQPPSSAASRVQSAAPARPGPAAHV--YPAGSQ 86
>AJ317974-1|CAC38072.3| 1044|Homo sapiens ataxin-2 related domain
protein protein.
Length = 1044
Score = 32.3 bits (70), Expect = 2.2
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 8/79 (10%)
Frame = +1
Query: 232 LQPDTRRHPEDAR--PTGRRGDSRRPTTSVSAVTAALPGRPGDAAGVPGYPA------GP 387
L+P + P + P ++ +RRP S LPG +A PG PA GP
Sbjct: 2 LKPQPLQQPSQPQQPPPTQQAVARRPPGGTSPPNGGLPGPLATSAAPPGPPAAASPCLGP 61
Query: 388 EPACRVGTRYTADRVALPQ 444
A G R A+ + PQ
Sbjct: 62 VAAAGSGLRRGAEGILAPQ 80
>AJ317973-1|CAC38071.3| 1044|Homo sapiens ataxin-2 related domain
protein protein.
Length = 1044
Score = 32.3 bits (70), Expect = 2.2
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 8/79 (10%)
Frame = +1
Query: 232 LQPDTRRHPEDAR--PTGRRGDSRRPTTSVSAVTAALPGRPGDAAGVPGYPA------GP 387
L+P + P + P ++ +RRP S LPG +A PG PA GP
Sbjct: 2 LKPQPLQQPSQPQQPPPTQQAVARRPPGGTSPPNGGLPGPLATSAAPPGPPAAASPCLGP 61
Query: 388 EPACRVGTRYTADRVALPQ 444
A G R A+ + PQ
Sbjct: 62 VAAAGSGLRRGAEGILAPQ 80
>AJ317972-1|CAC38070.3| 1097|Homo sapiens ataxin-2 related domain
protein protein.
Length = 1097
Score = 32.3 bits (70), Expect = 2.2
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 8/79 (10%)
Frame = +1
Query: 232 LQPDTRRHPEDAR--PTGRRGDSRRPTTSVSAVTAALPGRPGDAAGVPGYPA------GP 387
L+P + P + P ++ +RRP S LPG +A PG PA GP
Sbjct: 2 LKPQPLQQPSQPQQPPPTQQAVARRPPGGTSPPNGGLPGPLATSAAPPGPPAAASPCLGP 61
Query: 388 EPACRVGTRYTADRVALPQ 444
A G R A+ + PQ
Sbjct: 62 VAAAGSGLRRGAEGILAPQ 80
>AJ317971-1|CAC38069.3| 1062|Homo sapiens ataxin-2 related domain
protein protein.
Length = 1062
Score = 32.3 bits (70), Expect = 2.2
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 8/79 (10%)
Frame = +1
Query: 232 LQPDTRRHPEDAR--PTGRRGDSRRPTTSVSAVTAALPGRPGDAAGVPGYPA------GP 387
L+P + P + P ++ +RRP S LPG +A PG PA GP
Sbjct: 2 LKPQPLQQPSQPQQPPPTQQAVARRPPGGTSPPNGGLPGPLATSAAPPGPPAAASPCLGP 61
Query: 388 EPACRVGTRYTADRVALPQ 444
A G R A+ + PQ
Sbjct: 62 VAAAGSGLRRGAEGILAPQ 80
>AJ317970-1|CAC38068.1| 1075|Homo sapiens ataxin-2 related domain
protein protein.
Length = 1075
Score = 32.3 bits (70), Expect = 2.2
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 8/79 (10%)
Frame = +1
Query: 232 LQPDTRRHPEDAR--PTGRRGDSRRPTTSVSAVTAALPGRPGDAAGVPGYPA------GP 387
L+P + P + P ++ +RRP S LPG +A PG PA GP
Sbjct: 2 LKPQPLQQPSQPQQPPPTQQAVARRPPGGTSPPNGGLPGPLATSAAPPGPPAAASPCLGP 61
Query: 388 EPACRVGTRYTADRVALPQ 444
A G R A+ + PQ
Sbjct: 62 VAAAGSGLRRGAEGILAPQ 80
>AF281070-2|AAM69365.1| 1600|Homo sapiens eukaryotic translation
initiation factor 4G I protein.
Length = 1600
Score = 32.3 bits (70), Expect = 2.2
Identities = 20/55 (36%), Positives = 27/55 (49%)
Frame = +1
Query: 226 STLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPGDAAGVPGYPAGPE 390
ST Q P R ++ P+++ S V +A P RPG AA V YPAG +
Sbjct: 34 STPQATQMNTPSQPRQHFYPSRAQPPSSAASRVQSAAPARPGPAAHV--YPAGSQ 86
>AF002816-1|AAC78443.1| 177|Homo sapiens eucaryotic translation
initiation factor 4G isoform 2 protein.
Length = 177
Score = 32.3 bits (70), Expect = 2.2
Identities = 20/55 (36%), Positives = 27/55 (49%)
Frame = +1
Query: 226 STLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPGDAAGVPGYPAGPE 390
ST Q P R ++ P+++ S V +A P RPG AA V YPAG +
Sbjct: 5 STPQATQMNTPSQPRQHFYPSRAQPPSSAASRVQSAAPARPGPAAHV--YPAGSQ 57
>D43951-1|BAA07895.3| 1175|Homo sapiens KIAA0099 protein protein.
Length = 1175
Score = 31.9 bits (69), Expect = 3.0
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +1
Query: 175 PISVRGQNPVRVGGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPGD 354
P + +GQ V GG + L P+ + +G P + +AV +AL G
Sbjct: 508 PQAQQGQQQVLRGGASQRPLTPNQNQ----------QGQQTDPLVAAAAVNSALAFGQGL 557
Query: 355 AAGVPGYP 378
AAG+PGYP
Sbjct: 558 AAGMPGYP 565
>BC013398-1|AAH13398.1| 1186|Homo sapiens pumilio homolog 1
(Drosophila) protein.
Length = 1186
Score = 31.9 bits (69), Expect = 3.0
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +1
Query: 175 PISVRGQNPVRVGGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPGD 354
P + +GQ V GG + L P+ + +G P + +AV +AL G
Sbjct: 494 PQAQQGQQQVLRGGASQRPLTPNQNQ----------QGQQTDPLVAAAAVNSALAFGQGL 543
Query: 355 AAGVPGYP 378
AAG+PGYP
Sbjct: 544 AAGMPGYP 551
>AL445235-5|CAI22249.1| 1224|Homo sapiens pumilio homolog 1
(Drosophila) protein.
Length = 1224
Score = 31.9 bits (69), Expect = 3.0
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +1
Query: 175 PISVRGQNPVRVGGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPGD 354
P + +GQ V GG + L P+ + +G P + +AV +AL G
Sbjct: 530 PQAQQGQQQVLRGGASQRPLTPNQNQ----------QGQQTDPLVAAAAVNSALAFGQGL 579
Query: 355 AAGVPGYP 378
AAG+PGYP
Sbjct: 580 AAGMPGYP 587
>AL445235-4|CAI22248.1| 925|Homo sapiens pumilio homolog 1
(Drosophila) protein.
Length = 925
Score = 31.9 bits (69), Expect = 3.0
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +1
Query: 175 PISVRGQNPVRVGGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPGD 354
P + +GQ V GG + L P+ + +G P + +AV +AL G
Sbjct: 231 PQAQQGQQQVLRGGASQRPLTPNQNQ----------QGQQTDPLVAAAAVNSALAFGQGL 280
Query: 355 AAGVPGYP 378
AAG+PGYP
Sbjct: 281 AAGMPGYP 288
>AL445235-3|CAI22247.1| 1189|Homo sapiens pumilio homolog 1
(Drosophila) protein.
Length = 1189
Score = 31.9 bits (69), Expect = 3.0
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +1
Query: 175 PISVRGQNPVRVGGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPGD 354
P + +GQ V GG + L P+ + +G P + +AV +AL G
Sbjct: 495 PQAQQGQQQVLRGGASQRPLTPNQNQ----------QGQQTDPLVAAAAVNSALAFGQGL 544
Query: 355 AAGVPGYP 378
AAG+PGYP
Sbjct: 545 AAGMPGYP 552
>AL445235-2|CAI22246.1| 1186|Homo sapiens pumilio homolog 1
(Drosophila) protein.
Length = 1186
Score = 31.9 bits (69), Expect = 3.0
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +1
Query: 175 PISVRGQNPVRVGGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPGD 354
P + +GQ V GG + L P+ + +G P + +AV +AL G
Sbjct: 494 PQAQQGQQQVLRGGASQRPLTPNQNQ----------QGQQTDPLVAAAAVNSALAFGQGL 543
Query: 355 AAGVPGYP 378
AAG+PGYP
Sbjct: 544 AAGMPGYP 551
>AL356320-6|CAH71205.1| 1224|Homo sapiens pumilio homolog 1
(Drosophila) protein.
Length = 1224
Score = 31.9 bits (69), Expect = 3.0
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +1
Query: 175 PISVRGQNPVRVGGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPGD 354
P + +GQ V GG + L P+ + +G P + +AV +AL G
Sbjct: 530 PQAQQGQQQVLRGGASQRPLTPNQNQ----------QGQQTDPLVAAAAVNSALAFGQGL 579
Query: 355 AAGVPGYP 378
AAG+PGYP
Sbjct: 580 AAGMPGYP 587
>AL356320-5|CAH71204.1| 925|Homo sapiens pumilio homolog 1
(Drosophila) protein.
Length = 925
Score = 31.9 bits (69), Expect = 3.0
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +1
Query: 175 PISVRGQNPVRVGGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPGD 354
P + +GQ V GG + L P+ + +G P + +AV +AL G
Sbjct: 231 PQAQQGQQQVLRGGASQRPLTPNQNQ----------QGQQTDPLVAAAAVNSALAFGQGL 280
Query: 355 AAGVPGYP 378
AAG+PGYP
Sbjct: 281 AAGMPGYP 288
>AL356320-4|CAH71202.1| 1189|Homo sapiens pumilio homolog 1
(Drosophila) protein.
Length = 1189
Score = 31.9 bits (69), Expect = 3.0
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +1
Query: 175 PISVRGQNPVRVGGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPGD 354
P + +GQ V GG + L P+ + +G P + +AV +AL G
Sbjct: 495 PQAQQGQQQVLRGGASQRPLTPNQNQ----------QGQQTDPLVAAAAVNSALAFGQGL 544
Query: 355 AAGVPGYP 378
AAG+PGYP
Sbjct: 545 AAGMPGYP 552
>AL356320-3|CAH71203.1| 1186|Homo sapiens pumilio homolog 1
(Drosophila) protein.
Length = 1186
Score = 31.9 bits (69), Expect = 3.0
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +1
Query: 175 PISVRGQNPVRVGGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPGD 354
P + +GQ V GG + L P+ + +G P + +AV +AL G
Sbjct: 494 PQAQQGQQQVLRGGASQRPLTPNQNQ----------QGQQTDPLVAAAAVNSALAFGQGL 543
Query: 355 AAGVPGYP 378
AAG+PGYP
Sbjct: 544 AAGMPGYP 551
>AL138752-6|CAI13878.1| 559|Homo sapiens WD repeat domain 32
protein.
Length = 559
Score = 31.9 bits (69), Expect = 3.0
Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Frame = +1
Query: 220 PRSTLQPDT-RRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRP-GDAAGVPGYPAGPEP 393
P S L P HP + RR + + + + LPG P A PG P+ P P
Sbjct: 34 PPSPLHPGADATHPPPPARSPRRPGAPSLSPAPRSGELGLPGAPESSTASAPGEPSPPSP 93
Query: 394 ACR 402
CR
Sbjct: 94 PCR 96
>AK222605-1|BAD96325.1| 1188|Homo sapiens pumilio homolog 1 variant
protein.
Length = 1188
Score = 31.9 bits (69), Expect = 3.0
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +1
Query: 175 PISVRGQNPVRVGGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPGD 354
P + +GQ V GG + L P+ + +G P + +AV +AL G
Sbjct: 494 PQAQQGQQQVLRGGASQRPLTPNQNQ----------QGQQTDPLVAAAAVNSALAFGQGL 543
Query: 355 AAGVPGYP 378
AAG+PGYP
Sbjct: 544 AAGMPGYP 551
>AF315592-1|AAG31807.1| 1186|Homo sapiens Pumilio 1 protein.
Length = 1186
Score = 31.9 bits (69), Expect = 3.0
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +1
Query: 175 PISVRGQNPVRVGGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPGD 354
P + +GQ V GG + L P+ + +G P + +AV +AL G
Sbjct: 494 PQAQQGQQQVLRGGASQRPLTPNQNQ----------QGQQTDPLVAAAAVNSALAFGQGL 543
Query: 355 AAGVPGYP 378
AAG+PGYP
Sbjct: 544 AAGMPGYP 551
>BC150266-1|AAI50267.1| 1336|Homo sapiens mitogen-activated protein
kinase 8 interacting protein 3 protein.
Length = 1336
Score = 31.5 bits (68), Expect = 3.9
Identities = 20/63 (31%), Positives = 25/63 (39%), Gaps = 4/63 (6%)
Frame = +3
Query: 108 DRGPKEFRAHPLNDSPALLHPASDLRP----GSKPGQSRGVPAVNTTTRHAAPPRGRPTD 275
D GP E L P H +D P G +PG G +++TR P G PT
Sbjct: 903 DPGPSEPETATLRPGPLTEHVFTDPAPTPSSGPQPGSENGPEPDSSSTRPEPEPSGDPTG 962
Query: 276 GSS 284
S
Sbjct: 963 AGS 965
>AL031718-1|CAB72318.1| 552|Homo sapiens c371H6.1 (KIAA0516
protein) protein.
Length = 552
Score = 31.5 bits (68), Expect = 3.9
Identities = 20/63 (31%), Positives = 25/63 (39%), Gaps = 4/63 (6%)
Frame = +3
Query: 108 DRGPKEFRAHPLNDSPALLHPASDLRP----GSKPGQSRGVPAVNTTTRHAAPPRGRPTD 275
D GP E L P H +D P G +PG G +++TR P G PT
Sbjct: 88 DPGPSEPETATLRPGPLTEHVFTDPAPTPSSGPQPGSENGPEPDSSSTRPEPEPSGDPTG 147
Query: 276 GSS 284
S
Sbjct: 148 AGS 150
>AL031717-1|CAM26394.1| 1336|Homo sapiens mitogen-activated protein
kinase 8 interacting protein 3 protein.
Length = 1336
Score = 31.5 bits (68), Expect = 3.9
Identities = 20/63 (31%), Positives = 25/63 (39%), Gaps = 4/63 (6%)
Frame = +3
Query: 108 DRGPKEFRAHPLNDSPALLHPASDLRP----GSKPGQSRGVPAVNTTTRHAAPPRGRPTD 275
D GP E L P H +D P G +PG G +++TR P G PT
Sbjct: 903 DPGPSEPETATLRPGPLTEHVFTDPAPTPSSGPQPGSENGPEPDSSSTRPEPEPSGDPTG 962
Query: 276 GSS 284
S
Sbjct: 963 AGS 965
>AL031710-1|CAM26364.1| 1336|Homo sapiens mitogen-activated protein
kinase 8 interacting protein 3 protein.
Length = 1336
Score = 31.5 bits (68), Expect = 3.9
Identities = 20/63 (31%), Positives = 25/63 (39%), Gaps = 4/63 (6%)
Frame = +3
Query: 108 DRGPKEFRAHPLNDSPALLHPASDLRP----GSKPGQSRGVPAVNTTTRHAAPPRGRPTD 275
D GP E L P H +D P G +PG G +++TR P G PT
Sbjct: 903 DPGPSEPETATLRPGPLTEHVFTDPAPTPSSGPQPGSENGPEPDSSSTRPEPEPSGDPTG 962
Query: 276 GSS 284
S
Sbjct: 963 AGS 965
>AK098358-1|BAC05291.1| 134|Homo sapiens protein ( Homo sapiens
cDNA FLJ25492 fis, clone CBR01389. ).
Length = 134
Score = 31.5 bits (68), Expect = 3.9
Identities = 20/56 (35%), Positives = 24/56 (42%)
Frame = +1
Query: 211 GGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPGDAAGVPGYP 378
G P S L+ +R EDAR R DSR SV+ A P A +P P
Sbjct: 63 GDQPASILEAQIKRDREDARSQHRHVDSRSCCISVTLSPCAPEVIPDPTAALPSVP 118
>AE006639-4|AAK61290.1| 1342|Homo sapiens similar to sperm specifc
protein protein.
Length = 1342
Score = 31.5 bits (68), Expect = 3.9
Identities = 20/63 (31%), Positives = 25/63 (39%), Gaps = 4/63 (6%)
Frame = +3
Query: 108 DRGPKEFRAHPLNDSPALLHPASDLRP----GSKPGQSRGVPAVNTTTRHAAPPRGRPTD 275
D GP E L P H +D P G +PG G +++TR P G PT
Sbjct: 903 DPGPSEPETATLRPGPLTEHVFTDPAPTPSSGPQPGSENGPEPDSSSTRPEPEPSGDPTG 962
Query: 276 GSS 284
S
Sbjct: 963 AGS 965
>AB028989-1|BAA83018.2| 1346|Homo sapiens KIAA1066 protein protein.
Length = 1346
Score = 31.5 bits (68), Expect = 3.9
Identities = 20/63 (31%), Positives = 25/63 (39%), Gaps = 4/63 (6%)
Frame = +3
Query: 108 DRGPKEFRAHPLNDSPALLHPASDLRP----GSKPGQSRGVPAVNTTTRHAAPPRGRPTD 275
D GP E L P H +D P G +PG G +++TR P G PT
Sbjct: 913 DPGPSEPETATLRPGPLTEHVFTDPAPTPSSGPQPGSENGPEPDSSSTRPEPEPSGDPTG 972
Query: 276 GSS 284
S
Sbjct: 973 AGS 975
>BC132918-1|AAI32919.1| 317|Homo sapiens similar to 4931415M17
protein protein.
Length = 317
Score = 31.1 bits (67), Expect = 5.2
Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = +1
Query: 175 PISVRGQNPVRVGGFPRSTLQPD--TRRHPEDARPTGRRGDSR 297
P+ V Q P V PR L P T P P GR+GDSR
Sbjct: 106 PLEVDAQEPPGVENIPRQILLPAGFTPDTPHPPCPPGRKGDSR 148
>BC132916-1|AAI32917.1| 317|Homo sapiens similar to 4931415M17
protein protein.
Length = 317
Score = 31.1 bits (67), Expect = 5.2
Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = +1
Query: 175 PISVRGQNPVRVGGFPRSTLQPD--TRRHPEDARPTGRRGDSR 297
P+ V Q P V PR L P T P P GR+GDSR
Sbjct: 106 PLEVDAQEPPGVENIPRQILLPAGFTPDTPHPPCPPGRKGDSR 148
>BC069238-1|AAH69238.1| 403|Homo sapiens zinc finger, CCHC domain
containing 3 protein.
Length = 403
Score = 31.1 bits (67), Expect = 5.2
Identities = 19/73 (26%), Positives = 25/73 (34%)
Frame = +1
Query: 190 GQNPVRVGGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRPGDAAGVP 369
G P G P+ + + + G RR +A A P RPG+A
Sbjct: 87 GDFPPAGRGDPKGRRRDPAGEAVDPRKKKGAAEAGRRKKAEAAAAAMATPARPGEAEDAA 146
Query: 370 GYPAGPEPACRVG 408
P EPA G
Sbjct: 147 ERPLQDEPAAAAG 159
>AK131083-1|BAC85133.1| 500|Homo sapiens FLJ00283 protein protein.
Length = 500
Score = 31.1 bits (67), Expect = 5.2
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +3
Query: 114 GPKEFRAHPLNDSPALLHPASDLRPGSKPGQSRGV-PAVNTTTRHAAPPRGRPTDGSS 284
GP RA ++ PAL S+ S+PG+ G PA+ T PP +G S
Sbjct: 104 GPAAHRAQGYHEGPALSSGVSECLGESRPGEDGGTGPALQECTVGTLPPPRPRREGRS 161
>AK097419-1|BAC05044.1| 271|Homo sapiens protein ( Homo sapiens
cDNA FLJ40100 fis, clone TESTI2004675. ).
Length = 271
Score = 31.1 bits (67), Expect = 5.2
Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = +1
Query: 175 PISVRGQNPVRVGGFPRSTLQPD--TRRHPEDARPTGRRGDSR 297
P+ V Q P V PR L P T P P GR+GDSR
Sbjct: 106 PLEVDAQEPPGVENIPRQILLPAGFTPDTPHPPCPPGRKGDSR 148
>AB210013-1|BAE06095.1| 1624|Homo sapiens EIF4G1 variant protein
protein.
Length = 1624
Score = 31.1 bits (67), Expect = 5.2
Identities = 32/100 (32%), Positives = 44/100 (44%), Gaps = 4/100 (4%)
Frame = +1
Query: 103 EQTAGPRNLGPTH*TTPLHSYTRRPISVRGQNPVRVGGFPRSTLQPDTRRHPEDA--RPT 276
E P++ GP +P +P GQ V P++T Q +T P R
Sbjct: 18 EMNKAPQSTGPPPAPSP---GLPQPAFPPGQTAPVVFSTPQAT-QMNTPSQPRQGGFRSL 73
Query: 277 GRRGDSRR--PTTSVSAVTAALPGRPGDAAGVPGYPAGPE 390
SR P+++ S V +A P RPG AA V YPAG +
Sbjct: 74 QHFYPSRAQPPSSAASRVQSAAPARPGPAAHV--YPAGSQ 111
>Z83131-1|CAI42019.1| 632|Homo sapiens armadillo repeat containing,
X-linked 2 protein.
Length = 632
Score = 30.7 bits (66), Expect = 6.8
Identities = 22/74 (29%), Positives = 26/74 (35%), Gaps = 3/74 (4%)
Frame = +1
Query: 199 PVRVGGFPRSTLQPDTRRHPEDARPTGRR---GDSRRPTTSVSAVTAALPGRPGDAAGVP 369
P +V P + P A PTG G + P TS S TA +PG P
Sbjct: 202 PTKVAEAPGVASPTEAAEAPVPATPTGAAAPTGAAESPGTSGSPRTAVVPGTSAAKKATP 261
Query: 370 GYPAGPEPACRVGT 411
G G P T
Sbjct: 262 GAHTGAIPKATSAT 275
>BC045732-1|AAH45732.1| 209|Homo sapiens LOC339742 protein protein.
Length = 209
Score = 30.7 bits (66), Expect = 6.8
Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = +1
Query: 214 GFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGR-PGDAAGVPGYP 378
G P S + +RRHP+ A P R SR S + P R P A PG P
Sbjct: 12 GGPSSLARTHSRRHPDHAPPPVRPSCSRPLCAGSSCLATPEPARSPSIAEPGPGIP 67
>BC015926-1|AAH15926.1| 632|Homo sapiens ARMCX2 protein protein.
Length = 632
Score = 30.7 bits (66), Expect = 6.8
Identities = 22/74 (29%), Positives = 26/74 (35%), Gaps = 3/74 (4%)
Frame = +1
Query: 199 PVRVGGFPRSTLQPDTRRHPEDARPTGRR---GDSRRPTTSVSAVTAALPGRPGDAAGVP 369
P +V P + P A PTG G + P TS S TA +PG P
Sbjct: 202 PTKVAEAPGVASPTEAAEAPVPATPTGAAAPTGAAESPGTSGSPRTAVVPGTSAAKKATP 261
Query: 370 GYPAGPEPACRVGT 411
G G P T
Sbjct: 262 GAHTGAIPKATSAT 275
>BC012541-1|AAH12541.1| 632|Homo sapiens armadillo repeat
containing, X-linked 2 protein.
Length = 632
Score = 30.7 bits (66), Expect = 6.8
Identities = 22/74 (29%), Positives = 26/74 (35%), Gaps = 3/74 (4%)
Frame = +1
Query: 199 PVRVGGFPRSTLQPDTRRHPEDARPTGRR---GDSRRPTTSVSAVTAALPGRPGDAAGVP 369
P +V P + P A PTG G + P TS S TA +PG P
Sbjct: 202 PTKVAEAPGVASPTEAAEAPVPATPTGAAAPTGAAESPGTSGSPRTAVVPGTSAAKKATP 261
Query: 370 GYPAGPEPACRVGT 411
G G P T
Sbjct: 262 GAHTGAIPKATSAT 275
>AF104913-1|AAC82471.1| 1560|Homo sapiens eukaryotic protein
synthesis initiation factor protein.
Length = 1560
Score = 30.7 bits (66), Expect = 6.8
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +1
Query: 301 PTTSVSAVTAALPGRPGDAAGVPGYPAGPE 390
P+++ S V +A P RPG AA V YPAG +
Sbjct: 19 PSSAASRVQSAAPARPGPAAHV--YPAGSQ 46
>AF002815-1|AAC78442.1| 230|Homo sapiens eucaryotic translation
initiation factor 4G isoform 1 protein.
Length = 230
Score = 30.7 bits (66), Expect = 6.8
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +1
Query: 301 PTTSVSAVTAALPGRPGDAAGVPGYPAGPE 390
P+++ S V +A P RPG AA V YPAG +
Sbjct: 83 PSSAASRVQSAAPARPGPAAHV--YPAGSQ 110
>AB011084-1|BAA25438.2| 710|Homo sapiens KIAA0512 protein protein.
Length = 710
Score = 30.7 bits (66), Expect = 6.8
Identities = 22/74 (29%), Positives = 26/74 (35%), Gaps = 3/74 (4%)
Frame = +1
Query: 199 PVRVGGFPRSTLQPDTRRHPEDARPTGRR---GDSRRPTTSVSAVTAALPGRPGDAAGVP 369
P +V P + P A PTG G + P TS S TA +PG P
Sbjct: 280 PTKVAEAPGVASPTEAAEAPVPATPTGAAAPTGAAESPGTSGSPRTAVVPGTSAAKKATP 339
Query: 370 GYPAGPEPACRVGT 411
G G P T
Sbjct: 340 GAHTGAIPKATSAT 353
>X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing
factor protein.
Length = 707
Score = 30.3 bits (65), Expect = 9.0
Identities = 23/76 (30%), Positives = 29/76 (38%), Gaps = 1/76 (1%)
Frame = +1
Query: 172 RPISVRGQNPVR-VGGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRP 348
+P+ +G P VG P ++ P P G G PT AVT+A PG P
Sbjct: 108 KPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGS-GPGPTPTPP-PAVTSAPPGAP 165
Query: 349 GDAAGVPGYPAGPEPA 396
G P P A
Sbjct: 166 PPTPPSSGVPTTPPQA 181
>BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 30.3 bits (65), Expect = 9.0
Identities = 23/76 (30%), Positives = 29/76 (38%), Gaps = 1/76 (1%)
Frame = +1
Query: 172 RPISVRGQNPVR-VGGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRP 348
+P+ +G P VG P ++ P P G G PT AVT+A PG P
Sbjct: 108 KPVVAQGPGPAPGVGSTPPASSSAPPATPPTSGAPPGS-GPGPTPTPP-PAVTSAPPGAP 165
Query: 349 GDAAGVPGYPAGPEPA 396
G P P A
Sbjct: 166 PPTPPSSGVPTTPPQA 181
>BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein.
Length = 525
Score = 30.3 bits (65), Expect = 9.0
Identities = 23/76 (30%), Positives = 29/76 (38%), Gaps = 1/76 (1%)
Frame = +1
Query: 172 RPISVRGQNPVR-VGGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRP 348
+P+ +G P VG P ++ P P G G PT AVT+A PG P
Sbjct: 108 KPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGS-GPGPTPTPP-PAVTSAPPGAP 165
Query: 349 GDAAGVPGYPAGPEPA 396
G P P A
Sbjct: 166 PPTPPSSGVPTTPPQA 181
>BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein.
Length = 634
Score = 30.3 bits (65), Expect = 9.0
Identities = 23/76 (30%), Positives = 29/76 (38%), Gaps = 1/76 (1%)
Frame = +1
Query: 172 RPISVRGQNPVR-VGGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRP 348
+P+ +G P VG P ++ P P G G PT AVT+A PG P
Sbjct: 35 KPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGS-GPGPTPTPP-PAVTSAPPGAP 92
Query: 349 GDAAGVPGYPAGPEPA 396
G P P A
Sbjct: 93 PPTPPSSGVPTTPPQA 108
>AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 30.3 bits (65), Expect = 9.0
Identities = 23/76 (30%), Positives = 29/76 (38%), Gaps = 1/76 (1%)
Frame = +1
Query: 172 RPISVRGQNPVR-VGGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVTAALPGRP 348
+P+ +G P VG P ++ P P G G PT AVT+A PG P
Sbjct: 108 KPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGS-GPGPTPTPP-PAVTSAPPGAP 165
Query: 349 GDAAGVPGYPAGPEPA 396
G P P A
Sbjct: 166 PPTPPSSGVPTTPPQA 181
>AC073149-2|AAY24061.1| 365|Homo sapiens unknown protein.
Length = 365
Score = 30.3 bits (65), Expect = 9.0
Identities = 21/54 (38%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +1
Query: 250 RHPEDARPTGRRG-DSRRPTTSVSAVTAALPGRPGDAAGVPGYPAGPEPACRVG 408
R P G G D RR V + PGR GD G GYP GP P +G
Sbjct: 75 RGPSGPGCKGEPGLDGRRGVDGVPG-SPGPPGRKGDT-GEDGYPGGPGPPGPIG 126
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,554,513
Number of Sequences: 237096
Number of extensions: 2144470
Number of successful extensions: 10964
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 9224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10913
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10538170902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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