Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_I03
(788 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 80 3e-15
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 71 2e-12
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 71 2e-12
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 64 2e-10
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 64 2e-10
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 64 2e-10
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 64 2e-10
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 56 7e-08
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 46 4e-05
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 43 5e-04
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 43 5e-04
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 43 5e-04
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 42 7e-04
BT029263-1|ABK30900.1| 495|Drosophila melanogaster IP03351p pro... 32 1.0
AE014296-2454|AAF49683.1| 602|Drosophila melanogaster CG3020-PA... 32 1.0
U75467-1|AAB18341.1| 724|Drosophila melanogaster Atu protein. 30 4.1
AY075403-1|AAL68232.1| 725|Drosophila melanogaster LD30655p pro... 30 4.1
AE014297-303|AAF51991.1| 725|Drosophila melanogaster CG1433-PA ... 30 4.1
AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends l... 29 5.5
AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP mot... 29 5.5
AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends p... 29 5.5
AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,... 29 5.5
AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,... 29 5.5
AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,... 29 5.5
AY128500-1|AAM75093.1| 513|Drosophila melanogaster RH70372p pro... 29 7.2
AY051612-1|AAK93036.1| 513|Drosophila melanogaster GH25653p pro... 29 7.2
AE014298-2165|AAN09356.1| 426|Drosophila melanogaster CG6340-PD... 29 7.2
AE014298-2162|AAF48464.1| 513|Drosophila melanogaster CG6340-PB... 29 7.2
BT023770-1|AAZ41778.1| 931|Drosophila melanogaster LP23752p pro... 29 9.6
AY195738-1|AAO43730.1| 917|Drosophila melanogaster kekkon5 prec... 29 9.6
AE014298-2840|AAN09488.1| 931|Drosophila melanogaster CG12199-P... 29 9.6
AE014298-2839|AAF48953.2| 931|Drosophila melanogaster CG12199-P... 29 9.6
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 80.2 bits (189), Expect = 3e-15
Identities = 46/141 (32%), Positives = 70/141 (49%)
Frame = -1
Query: 728 VRDRXAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVMTYASVVFAHAARTHLKSLQVI 549
+R R + + Y +L SRSKLSL NK+T+YK + P Y ++ A +H+K +Q I
Sbjct: 765 IRTRLRAKVAKHYWLLSSRSKLSLSNKLTIYKQILAPNWKYGCQIWGLACDSHIKRIQAI 824
Query: 548 QSRFCRIAVGAPWFLRNVXXXXXXXXXXXSKYLQSASLRHFEKAARHENPLIVAAGNYIP 369
Q++ R+ G WF+RN + S R+ ++ RH N L A P
Sbjct: 825 QNKVARLITGCEWFVRNTTLHRDLKLATVFDEINKHSSRYHDRLERHRNRLASALNRSRP 884
Query: 368 DPVDRMVNRRRRPKHVITDPP 306
R +N RR+P+ +IT P
Sbjct: 885 ---PRRLN-RRQPRDLITRSP 901
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 70.5 bits (165), Expect = 2e-12
Identities = 34/100 (34%), Positives = 55/100 (55%)
Frame = -1
Query: 695 LYPMLCSRSKLSLRNKVTLYKTCIRPVMTYASVVFAHAARTHLKSLQVIQSRFCRIAVGA 516
L+ ++ +RS LSL K LY + ++P+ TY S ++ +A+R+++ +Q QSR RI GA
Sbjct: 767 LHWLINARSPLSLEFKALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGA 826
Query: 515 PWFLRNVXXXXXXXXXXXSKYLQSASLRHFEKAARHENPL 396
PW+LRN + + ++ EK H NPL
Sbjct: 827 PWYLRNENIHRDLKIKLVIEVIAEKKTKYNEKLTTHTNPL 866
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 70.5 bits (165), Expect = 2e-12
Identities = 34/100 (34%), Positives = 55/100 (55%)
Frame = -1
Query: 695 LYPMLCSRSKLSLRNKVTLYKTCIRPVMTYASVVFAHAARTHLKSLQVIQSRFCRIAVGA 516
L+ ++ +RS LSL K LY + ++P+ TY S ++ +A+R+++ +Q QSR RI GA
Sbjct: 767 LHWLINARSPLSLEFKALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGA 826
Query: 515 PWFLRNVXXXXXXXXXXXSKYLQSASLRHFEKAARHENPL 396
PW+LRN + + ++ EK H NPL
Sbjct: 827 PWYLRNENIHRDLKIKLVIEVIAEKKTKYNEKLTTHTNPL 866
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 64.5 bits (150), Expect = 2e-10
Identities = 24/67 (35%), Positives = 45/67 (67%)
Frame = -1
Query: 707 ILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVMTYASVVFAHAARTHLKSLQVIQSRFCRI 528
I+ LYP++ +SKLS+ NK+ ++KT P++ Y S V+ A+TH+K LQ+ Q++ ++
Sbjct: 797 IICTLYPLINRKSKLSISNKIIIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKL 856
Query: 527 AVGAPWF 507
+ P++
Sbjct: 857 IMNLPYY 863
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 64.5 bits (150), Expect = 2e-10
Identities = 24/67 (35%), Positives = 45/67 (67%)
Frame = -1
Query: 707 ILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVMTYASVVFAHAARTHLKSLQVIQSRFCRI 528
I+ LYP++ +SKLS+ NK+ ++KT P++ Y S V+ A+TH+K LQ+ Q++ ++
Sbjct: 745 IICTLYPLINRKSKLSISNKIIIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKL 804
Query: 527 AVGAPWF 507
+ P++
Sbjct: 805 IMNLPYY 811
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 64.1 bits (149), Expect = 2e-10
Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 1/135 (0%)
Frame = -1
Query: 704 LGRLYPMLCSRSKLSLRNKVTLYKTCIRPVMTYASVVFAHAARTHLKSLQVIQSRFCRIA 525
+ R+ ++ R+KLSL KV +YK+ + P + Y V+ AA++HL ++++Q++ R
Sbjct: 778 VARMSWLIAPRNKLSLGCKVNIYKSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRI 837
Query: 524 VGAPWFLRNVXXXXXXXXXXXSKYLQSASLRHFEKAARHENPLIVAAGNYIPDPVD-RMV 348
GAPW++R LQ+ + ++ E+ H N L G D R
Sbjct: 838 SGAPWYMRTRDIERDLKVPKLGDKLQNIAQKYMERLNVHPNSLARKLGTAAVVNADPRTR 897
Query: 347 NRRRRPKHVITDPPD 303
+RR +H D P+
Sbjct: 898 VKRRLKRHHPHDLPN 912
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 64.1 bits (149), Expect = 2e-10
Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 1/135 (0%)
Frame = -1
Query: 704 LGRLYPMLCSRSKLSLRNKVTLYKTCIRPVMTYASVVFAHAARTHLKSLQVIQSRFCRIA 525
+ R+ ++ R+KLSL KV +YK+ + P + Y V+ AA++HL ++++Q++ R
Sbjct: 580 VARMSWLIAPRNKLSLGCKVNIYKSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRI 639
Query: 524 VGAPWFLRNVXXXXXXXXXXXSKYLQSASLRHFEKAARHENPLIVAAGNYIPDPVD-RMV 348
GAPW++R LQ+ + ++ E+ H N L G D R
Sbjct: 640 SGAPWYMRTRDIERDLKVPKLGDKLQNIAQKYLERLNVHPNSLARKLGTAAVVNADPRTR 699
Query: 347 NRRRRPKHVITDPPD 303
+RR +H D P+
Sbjct: 700 VKRRLKRHHPHDLPN 714
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 55.6 bits (128), Expect = 7e-08
Identities = 24/66 (36%), Positives = 44/66 (66%)
Frame = -1
Query: 695 LYPMLCSRSKLSLRNKVTLYKTCIRPVMTYASVVFAHAARTHLKSLQVIQSRFCRIAVGA 516
L+ ++ S S LSL +KV LY + ++P+ TY S ++ +A+ +++ +Q QS+ R GA
Sbjct: 769 LHWLINSGSPLSLDHKVLLYNSILKPIWTYGSQLWGNASNSNIDIIQRAQSKILRTITGA 828
Query: 515 PWFLRN 498
PW++R+
Sbjct: 829 PWYVRS 834
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 46.4 bits (105), Expect = 4e-05
Identities = 22/97 (22%), Positives = 47/97 (48%)
Frame = -1
Query: 686 MLCSRSKLSLRNKVTLYKTCIRPVMTYASVVFAHAARTHLKSLQVIQSRFCRIAVGAPWF 507
+L +S ++LR K +Y C+ P+ Y ++ AA+++ +QV+Q+R R P++
Sbjct: 785 LLNRKSTMTLRAKRAVYVHCVAPIWLYGIQIWGIAAKSNYNRIQVLQNRAMRAITDCPYY 844
Query: 506 LRNVXXXXXXXXXXXSKYLQSASLRHFEKAARHENPL 396
+R + + + R+ ++ RH + L
Sbjct: 845 VRGTTLHRDLNLHTVEEQISRHTSRYSDRLRRHHSIL 881
Score = 29.1 bits (62), Expect = 7.2
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -2
Query: 778 LGVTLDRGMTFRPHIKPYATAPRLF 704
LG+TLD+ +TF PH+K AT R +
Sbjct: 754 LGITLDKRLTFGPHLK--ATTRRCY 776
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 42.7 bits (96), Expect = 5e-04
Identities = 27/118 (22%), Positives = 50/118 (42%), Gaps = 3/118 (2%)
Frame = -1
Query: 686 MLCSRSKLSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHLKSLQVIQSRFCRIAVGAPW 510
++ S L K+ L+K + P+ YA ++ + T K +Q +++++ R + A
Sbjct: 842 LIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASR 901
Query: 509 FLRNVXXXXXXXXXXXSKYLQSASLRHFEKAARHENPLI--VAAGNYIPDPVDRMVNR 342
+ R + AS R+ HENPLI + Y P+ ++ NR
Sbjct: 902 YTRQADIRTKYNIKSFDEIFDKASQRYANSLTDHENPLIYDLLINAYKPNRLELSKNR 959
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 42.7 bits (96), Expect = 5e-04
Identities = 27/118 (22%), Positives = 50/118 (42%), Gaps = 3/118 (2%)
Frame = -1
Query: 686 MLCSRSKLSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHLKSLQVIQSRFCRIAVGAPW 510
++ S L K+ L+K + P+ YA ++ + T K +Q +++++ R + A
Sbjct: 842 LIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASR 901
Query: 509 FLRNVXXXXXXXXXXXSKYLQSASLRHFEKAARHENPLI--VAAGNYIPDPVDRMVNR 342
+ R + AS R+ HENPLI + Y P+ ++ NR
Sbjct: 902 YTRQADIRTKYNIKSFDEIFDKASQRYANSLTDHENPLIYDLLINAYKPNRLELSKNR 959
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 42.7 bits (96), Expect = 5e-04
Identities = 27/118 (22%), Positives = 50/118 (42%), Gaps = 3/118 (2%)
Frame = -1
Query: 686 MLCSRSKLSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHLKSLQVIQSRFCRIAVGAPW 510
++ S L K+ L+K + P+ YA ++ + T K +Q +++++ R + A
Sbjct: 842 LIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASR 901
Query: 509 FLRNVXXXXXXXXXXXSKYLQSASLRHFEKAARHENPLI--VAAGNYIPDPVDRMVNR 342
+ R + AS R+ HENPLI + Y P+ ++ NR
Sbjct: 902 YTRQADIRTKYNIKSFDEIFDKASQRYANSLTDHENPLIYDLLINAYKPNRLELSKNR 959
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 42.3 bits (95), Expect = 7e-04
Identities = 27/118 (22%), Positives = 50/118 (42%), Gaps = 3/118 (2%)
Frame = -1
Query: 686 MLCSRSKLSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHLKSLQVIQSRFCRIAVGAPW 510
++ S L K+ L+K + P+ YA ++ + T K +Q +++++ R + A
Sbjct: 395 LIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASR 454
Query: 509 FLRNVXXXXXXXXXXXSKYLQSASLRHFEKAARHENPLI--VAAGNYIPDPVDRMVNR 342
+ R + AS R+ HENPLI + Y P+ ++ NR
Sbjct: 455 YTRQADIRTKYNIKSFDETFDKASQRYANSLTDHENPLIYDLLINAYKPNRLELSKNR 512
>BT029263-1|ABK30900.1| 495|Drosophila melanogaster IP03351p
protein.
Length = 495
Score = 31.9 bits (69), Expect = 1.0
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = -3
Query: 402 PSHRSRWKLHTRPSRPNGKPSTSPKARHYG----SS*SINGAFRHHKHRSPS 259
PS S+ + + PSR +G +SP+ R +G SS F HH RSPS
Sbjct: 77 PSISSQSSVDSAPSRHSGHRGSSPQIRTFGPDGRSSLPSEPGFPHHLARSPS 128
>AE014296-2454|AAF49683.1| 602|Drosophila melanogaster CG3020-PA
protein.
Length = 602
Score = 31.9 bits (69), Expect = 1.0
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = -3
Query: 402 PSHRSRWKLHTRPSRPNGKPSTSPKARHYG----SS*SINGAFRHHKHRSPS 259
PS S+ + + PSR +G +SP+ R +G SS F HH RSPS
Sbjct: 184 PSISSQSSVDSAPSRHSGHRGSSPQIRTFGPDGRSSLPSEPGFPHHLARSPS 235
>U75467-1|AAB18341.1| 724|Drosophila melanogaster Atu protein.
Length = 724
Score = 29.9 bits (64), Expect = 4.1
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = -3
Query: 423 EGGTT*EP-SHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNP 247
+ GT P SHRS + P + S SP++R GS+ S H + + S
Sbjct: 100 KSGTPESPQSHRSGSLQSRKSGSPQSRRSGSPQSRKSGSTHSRRSGSAHSRRSGSARSRK 159
Query: 246 SLATKGSTSELTHR-HS 199
S + + SE R HS
Sbjct: 160 SGSAQSDRSESRSRSHS 176
>AY075403-1|AAL68232.1| 725|Drosophila melanogaster LD30655p
protein.
Length = 725
Score = 29.9 bits (64), Expect = 4.1
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = -3
Query: 423 EGGTT*EP-SHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNP 247
+ GT P SHRS + P + S SP++R GS+ S H + + S
Sbjct: 101 KSGTPESPQSHRSGSLQSRKSGSPQSRRSGSPQSRKSGSTHSRRSGSAHSRRSGSARSRK 160
Query: 246 SLATKGSTSELTHR-HS 199
S + + SE R HS
Sbjct: 161 SGSAQSDRSESRSRSHS 177
>AE014297-303|AAF51991.1| 725|Drosophila melanogaster CG1433-PA
protein.
Length = 725
Score = 29.9 bits (64), Expect = 4.1
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = -3
Query: 423 EGGTT*EP-SHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNP 247
+ GT P SHRS + P + S SP++R GS+ S H + + S
Sbjct: 101 KSGTPESPQSHRSGSLQSRKSGSPQSRRSGSPQSRKSGSTHSRRSGSAHSRRSGSARSRK 160
Query: 246 SLATKGSTSELTHR-HS 199
S + + SE R HS
Sbjct: 161 SGSAQSDRSESRSRSHS 177
>AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends long
isoform protein.
Length = 5554
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -3
Query: 354 NGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSELTHRHS 199
NG P+ + RH S + R H RSPSS + S ++ S+ +H H+
Sbjct: 417 NGVPTHPIRTRHNLHGRSTTSSSRSHS-RSPSSYSSSHSSSSSSHSSSHSHA 467
>AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP motif
protein long isoformprotein.
Length = 5533
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -3
Query: 354 NGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSELTHRHS 199
NG P+ + RH S + R H RSPSS + S ++ S+ +H H+
Sbjct: 423 NGVPTHPIRTRHNLHGRSTTSSSRSHS-RSPSSYSSSHSSSSSSHSSSHSHA 473
>AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends
protein.
Length = 5476
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -3
Query: 354 NGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSELTHRHS 199
NG P+ + RH S + R H RSPSS + S ++ S+ +H H+
Sbjct: 366 NGVPTHPIRTRHNLHGRSTTSSSRSHS-RSPSSYSSSHSSSSSSHSSSHSHA 416
>AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,
isoform C protein.
Length = 5476
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -3
Query: 354 NGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSELTHRHS 199
NG P+ + RH S + R H RSPSS + S ++ S+ +H H+
Sbjct: 366 NGVPTHPIRTRHNLHGRSTTSSSRSHS-RSPSSYSSSHSSSSSSHSSSHSHA 416
>AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,
isoform B protein.
Length = 5533
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -3
Query: 354 NGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSELTHRHS 199
NG P+ + RH S + R H RSPSS + S ++ S+ +H H+
Sbjct: 423 NGVPTHPIRTRHNLHGRSTTSSSRSHS-RSPSSYSSSHSSSSSSHSSSHSHA 473
>AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,
isoform A protein.
Length = 5560
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -3
Query: 354 NGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSELTHRHS 199
NG P+ + RH S + R H RSPSS + S ++ S+ +H H+
Sbjct: 423 NGVPTHPIRTRHNLHGRSTTSSSRSHS-RSPSSYSSSHSSSSSSHSSSHSHA 473
>AY128500-1|AAM75093.1| 513|Drosophila melanogaster RH70372p
protein.
Length = 513
Score = 29.1 bits (62), Expect = 7.2
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = -3
Query: 399 SHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTS 220
SHR R + R R + + R SS +G RHH H + SSS + A ++
Sbjct: 157 SHRERERDRDR-ERERDRDKDRDRRRSEKSSRHHSGKERHHHHHNNSSSAAAAAVSAASV 215
Query: 219 ELTH 208
+H
Sbjct: 216 RRSH 219
>AY051612-1|AAK93036.1| 513|Drosophila melanogaster GH25653p
protein.
Length = 513
Score = 29.1 bits (62), Expect = 7.2
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = -3
Query: 399 SHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTS 220
SHR R + R R + + R SS +G RHH H + SSS + A ++
Sbjct: 157 SHRERERDRDR-ERERDRDKDRDRRRSEKSSRHHSGKERHHHHHNNSSSAAAAAVSAASV 215
Query: 219 ELTH 208
+H
Sbjct: 216 RRSH 219
>AE014298-2165|AAN09356.1| 426|Drosophila melanogaster CG6340-PD,
isoform D protein.
Length = 426
Score = 29.1 bits (62), Expect = 7.2
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = -3
Query: 399 SHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTS 220
SHR R + R R + + R SS +G RHH H + SSS + A ++
Sbjct: 70 SHRERERDRDR-ERERDRDKDRDRRRSEKSSRHHSGKERHHHHHNNSSSAAAAAVSAASV 128
Query: 219 ELTH 208
+H
Sbjct: 129 RRSH 132
>AE014298-2162|AAF48464.1| 513|Drosophila melanogaster CG6340-PB,
isoform B protein.
Length = 513
Score = 29.1 bits (62), Expect = 7.2
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = -3
Query: 399 SHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTS 220
SHR R + R R + + R SS +G RHH H + SSS + A ++
Sbjct: 157 SHRERERDRDR-ERERDRDKDRDRRRSEKSSRHHSGKERHHHHHNNSSSAAAAAVSAASV 215
Query: 219 ELTH 208
+H
Sbjct: 216 RRSH 219
>BT023770-1|AAZ41778.1| 931|Drosophila melanogaster LP23752p
protein.
Length = 931
Score = 28.7 bits (61), Expect = 9.6
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -3
Query: 369 RPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSEL 214
+P P+ PSTS A H G+ + + +SP+S NPS +T+EL
Sbjct: 703 KPRAPSWAPSTSGAAGH--------GSIQLSEFQSPTSPNPSETGTATTAEL 746
>AY195738-1|AAO43730.1| 917|Drosophila melanogaster kekkon5
precursor protein.
Length = 917
Score = 28.7 bits (61), Expect = 9.6
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -3
Query: 369 RPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSEL 214
+P P+ PSTS A H G+ + + +SP+S NPS +T+EL
Sbjct: 689 KPRAPSWAPSTSGAAGH--------GSIQLSEFQSPTSPNPSETGTATTAEL 732
>AE014298-2840|AAN09488.1| 931|Drosophila melanogaster CG12199-PB,
isoform B protein.
Length = 931
Score = 28.7 bits (61), Expect = 9.6
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -3
Query: 369 RPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSEL 214
+P P+ PSTS A H G+ + + +SP+S NPS +T+EL
Sbjct: 703 KPRAPSWAPSTSGAAGH--------GSIQLSEFQSPTSPNPSETGTATTAEL 746
>AE014298-2839|AAF48953.2| 931|Drosophila melanogaster CG12199-PA,
isoform A protein.
Length = 931
Score = 28.7 bits (61), Expect = 9.6
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -3
Query: 369 RPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSEL 214
+P P+ PSTS A H G+ + + +SP+S NPS +T+EL
Sbjct: 703 KPRAPSWAPSTSGAAGH--------GSIQLSEFQSPTSPNPSETGTATTAEL 746
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,322,149
Number of Sequences: 53049
Number of extensions: 711794
Number of successful extensions: 2005
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1972
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3654740856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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