Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_H10
(822 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 314 7e-86
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 314 7e-86
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 314 7e-86
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 314 7e-86
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 314 7e-86
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 314 7e-86
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 272 3e-73
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 272 3e-73
U13875-9|AAA21160.3| 403|Caenorhabditis elegans Hypothetical pr... 33 0.33
U29244-17|AAC71097.2| 314|Caenorhabditis elegans Galectin prote... 28 7.0
AB038506-1|BAB11971.1| 314|Caenorhabditis elegans galectin LEC-... 28 7.0
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 314 bits (770), Expect = 7e-86
Identities = 154/243 (63%), Positives = 183/243 (75%), Gaps = 1/243 (0%)
Frame = -2
Query: 821 VIAHTQMKXLNXDKXRXTLWKSNLTGGTIEDKVKWXREHXEKPIPVDXVFAPR*ND*LHW 642
VIAHTQMK L + + L + + GGTIE KV W REH EK + VD VFA ++ +
Sbjct: 162 VIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQ--DEMIDT 219
Query: 641 CH-PRAKGYKGVTFRWHTKKLPRKTHKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTE 465
R G+KGVT RWHTKKLPRKTHK LRKVACIGAWHPSRV+FTVARAGQKG+HHRT
Sbjct: 220 IGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTI 279
Query: 464 MNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMG 285
+N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +G
Sbjct: 280 INNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 336
Query: 284 PKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 105
PKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 337 PKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Query: 104 EAA 96
A
Sbjct: 397 AEA 399
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 314 bits (770), Expect = 7e-86
Identities = 154/243 (63%), Positives = 183/243 (75%), Gaps = 1/243 (0%)
Frame = -2
Query: 821 VIAHTQMKXLNXDKXRXTLWKSNLTGGTIEDKVKWXREHXEKPIPVDXVFAPR*ND*LHW 642
VIAHTQMK L + + L + + GGTIE KV W REH EK + VD VFA ++ +
Sbjct: 162 VIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQ--DEMIDT 219
Query: 641 CH-PRAKGYKGVTFRWHTKKLPRKTHKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTE 465
R G+KGVT RWHTKKLPRKTHK LRKVACIGAWHPSRV+FTVARAGQKG+HHRT
Sbjct: 220 IGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTI 279
Query: 464 MNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMG 285
+N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +G
Sbjct: 280 INNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 336
Query: 284 PKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 105
PKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 337 PKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Query: 104 EAA 96
A
Sbjct: 397 AEA 399
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 314 bits (770), Expect = 7e-86
Identities = 154/243 (63%), Positives = 183/243 (75%), Gaps = 1/243 (0%)
Frame = -2
Query: 821 VIAHTQMKXLNXDKXRXTLWKSNLTGGTIEDKVKWXREHXEKPIPVDXVFAPR*ND*LHW 642
VIAHTQMK L + + L + + GGTIE KV W REH EK + VD VFA ++ +
Sbjct: 64 VIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQ--DEMIDT 121
Query: 641 CH-PRAKGYKGVTFRWHTKKLPRKTHKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTE 465
R G+KGVT RWHTKKLPRKTHK LRKVACIGAWHPSRV+FTVARAGQKG+HHRT
Sbjct: 122 IGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTI 181
Query: 464 MNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMG 285
+N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +G
Sbjct: 182 INNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 238
Query: 284 PKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 105
PKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 239 PKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298
Query: 104 EAA 96
A
Sbjct: 299 AEA 301
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 314 bits (770), Expect = 7e-86
Identities = 154/243 (63%), Positives = 183/243 (75%), Gaps = 1/243 (0%)
Frame = -2
Query: 821 VIAHTQMKXLNXDKXRXTLWKSNLTGGTIEDKVKWXREHXEKPIPVDXVFAPR*ND*LHW 642
VIAHTQMK L + + L + + GGTIE KV W REH EK + VD VFA ++ +
Sbjct: 162 VIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQ--DEMIDT 219
Query: 641 CH-PRAKGYKGVTFRWHTKKLPRKTHKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTE 465
R G+KGVT RWHTKKLPRKTHK LRKVACIGAWHPSRV+FTVARAGQKG+HHRT
Sbjct: 220 IGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTI 279
Query: 464 MNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMG 285
+N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +G
Sbjct: 280 INNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 336
Query: 284 PKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 105
PKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 337 PKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Query: 104 EAA 96
A
Sbjct: 397 AEA 399
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 314 bits (770), Expect = 7e-86
Identities = 154/243 (63%), Positives = 183/243 (75%), Gaps = 1/243 (0%)
Frame = -2
Query: 821 VIAHTQMKXLNXDKXRXTLWKSNLTGGTIEDKVKWXREHXEKPIPVDXVFAPR*ND*LHW 642
VIAHTQMK L + + L + + GGTIE KV W REH EK + VD VFA ++ +
Sbjct: 64 VIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQ--DEMIDT 121
Query: 641 CH-PRAKGYKGVTFRWHTKKLPRKTHKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTE 465
R G+KGVT RWHTKKLPRKTHK LRKVACIGAWHPSRV+FTVARAGQKG+HHRT
Sbjct: 122 IGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTI 181
Query: 464 MNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMG 285
+N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +G
Sbjct: 182 INNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 238
Query: 284 PKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 105
PKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 239 PKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298
Query: 104 EAA 96
A
Sbjct: 299 AEA 301
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 314 bits (770), Expect = 7e-86
Identities = 154/243 (63%), Positives = 183/243 (75%), Gaps = 1/243 (0%)
Frame = -2
Query: 821 VIAHTQMKXLNXDKXRXTLWKSNLTGGTIEDKVKWXREHXEKPIPVDXVFAPR*ND*LHW 642
VIAHTQMK L + + L + + GGTIE KV W REH EK + VD VFA ++ +
Sbjct: 162 VIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQ--DEMIDT 219
Query: 641 CH-PRAKGYKGVTFRWHTKKLPRKTHKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTE 465
R G+KGVT RWHTKKLPRKTHK LRKVACIGAWHPSRV+FTVARAGQKG+HHRT
Sbjct: 220 IGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTI 279
Query: 464 MNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMG 285
+N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +G
Sbjct: 280 INNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 336
Query: 284 PKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 105
PKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 337 PKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Query: 104 EAA 96
A
Sbjct: 397 AEA 399
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 272 bits (666), Expect = 3e-73
Identities = 126/179 (70%), Positives = 147/179 (82%)
Frame = -2
Query: 632 RAKGYKGVTFRWHTKKLPRKTHKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKK 453
R G+KGVT RWHTKKLPRKTHK LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N K
Sbjct: 176 RGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNK 235
Query: 452 IYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKR 273
IYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR
Sbjct: 236 IYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKR 292
Query: 272 IITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 96
+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 293 LITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 351
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 272 bits (666), Expect = 3e-73
Identities = 126/179 (70%), Positives = 147/179 (82%)
Frame = -2
Query: 632 RAKGYKGVTFRWHTKKLPRKTHKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKK 453
R G+KGVT RWHTKKLPRKTHK LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N K
Sbjct: 176 RGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNK 235
Query: 452 IYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKR 273
IYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR
Sbjct: 236 IYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKR 292
Query: 272 IITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 96
+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 293 LITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 351
>U13875-9|AAA21160.3| 403|Caenorhabditis elegans Hypothetical
protein C26E6.6 protein.
Length = 403
Score = 32.7 bits (71), Expect = 0.33
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -2
Query: 623 GYKGVTFRWHTKKLP-RKTHKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIY 447
G++G RW + P R+T K R++ +G+ +R+ G GY RT +I
Sbjct: 234 GFQGGMHRWGMRGQPTRRTTKSHRRIGSVGSVGDARIWPGKRMPGHMGYEWRTVSGLEIV 293
Query: 446 RI 441
RI
Sbjct: 294 RI 295
>U29244-17|AAC71097.2| 314|Caenorhabditis elegans Galectin protein
5 protein.
Length = 314
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -3
Query: 694 LSLSIXCLPQDEMIDCIGVTQGPKDTKVSLFVGTQ 590
++ +I CL ++ C G PK+T F+G Q
Sbjct: 2 ITRTIVCLSLAALVSCQGDASDPKETNYKKFIGEQ 36
>AB038506-1|BAB11971.1| 314|Caenorhabditis elegans galectin LEC-5
protein.
Length = 314
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -3
Query: 694 LSLSIXCLPQDEMIDCIGVTQGPKDTKVSLFVGTQ 590
++ +I CL ++ C G PK+T F+G Q
Sbjct: 2 ITRTIVCLSLAALVSCQGDASDPKETNYKKFIGEQ 36
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,401,043
Number of Sequences: 27780
Number of extensions: 430030
Number of successful extensions: 1100
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1074
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2029935014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -