Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_H04
(821 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0523 + 34499533-34499705,34499808-34499917,34500037-345002... 32 0.63
04_03_1046 + 21974577-21975126,21975620-21975894,21976120-219762... 30 2.6
02_03_0246 - 16807619-16808145,16808208-16808868 30 2.6
01_06_0787 - 31999632-32000045,32000128-32000214,32000295-320005... 30 2.6
05_07_0215 - 28455890-28457095 29 3.4
12_01_0432 - 3400942-3401361 29 4.5
09_04_0377 + 17086775-17088310 29 4.5
07_03_1562 - 27738369-27738568,27738767-27738962,27739079-277392... 29 4.5
12_01_0236 - 1775941-1776034,1776185-1776504,1776569-1776786,177... 29 5.9
09_04_0195 - 15509412-15509580,15510136-15510467,15510494-155109... 29 5.9
07_03_1500 + 27001842-27002058,27002144-27002283,27002458-270025... 29 5.9
12_01_0171 - 1268803-1269500,1271491-1271567,1271941-1272065,127... 28 7.8
11_01_0169 - 1365984-1366681,1368669-1368745,1369133-1369257,136... 28 7.8
05_03_0384 - 13361999-13362120,13362241-13362252,13362921-133629... 28 7.8
05_03_0383 - 13352924-13353045,13353166-13353177,13353844-133539... 28 7.8
01_06_1678 - 39095986-39096205,39096400-39096477,39096578-390969... 28 7.8
>03_06_0523 +
34499533-34499705,34499808-34499917,34500037-34500224,
34500984-34501451
Length = 312
Score = 31.9 bits (69), Expect = 0.63
Identities = 27/94 (28%), Positives = 39/94 (41%), Gaps = 1/94 (1%)
Frame = -1
Query: 299 GSAGQQLQQAADTCRQHQLLWQSEHLG*HDQS*FRRSARNSRGENHRRREKWCL-RLQRG 123
G GQ + A R +L HD+ RS SRG+ R +++ R ++
Sbjct: 210 GREGQSSRSEAYKDRDSRLRHSDRGSKDHDRYRHDRSPERSRGDRQRNNDRYAQGRDEKS 269
Query: 122 SQTESEVQHSRRGGEGRQHQFRERVAKSGLQEIR 21
+ SEV+H EG Q + R SG E R
Sbjct: 270 ERYRSEVKHD----EGDQKRSRRDTDSSGHYERR 299
>04_03_1046 +
21974577-21975126,21975620-21975894,21976120-21976284,
21976352-21976441,21977723-21978097
Length = 484
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/66 (25%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = -1
Query: 194 RSARNSRGENHRRREKWCLRLQRGSQTESEVQHSRRGGEGRQHQFRERV--AKSGLQEIR 21
+ + N+R EN R RE ++ QTE+E+Q + E + + E + + L++ R
Sbjct: 413 QESNNAREENKRFRESEKASKEQEKQTEAEIQKLKEKMEKDREEREEEIRRLRDDLEKER 472
Query: 20 KKKKKK 3
++++K+
Sbjct: 473 EERQKQ 478
>02_03_0246 - 16807619-16808145,16808208-16808868
Length = 395
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = -3
Query: 369 RRIRSS*NGHRRRCRTVRSYCTTWKCRPTATTGRR 265
R R G R CR+ R W CRP GRR
Sbjct: 89 RMTRGRLPGLSRSCRSSRMAARCWPCRPPCCCGRR 123
>01_06_0787 -
31999632-32000045,32000128-32000214,32000295-32000584,
32000670-32000844,32000930-32001142,32001227-32001328,
32001418-32001822,32001922-32002134,32002312-32002357,
32002602-32002867,32003936-32004012,32004095-32004170,
32004339-32004418,32004945-32005036,32005132-32005171,
32005301-32005400,32005815-32005962,32006071-32006153,
32006207-32006383
Length = 1027
Score = 29.9 bits (64), Expect = 2.6
Identities = 27/112 (24%), Positives = 45/112 (40%), Gaps = 3/112 (2%)
Frame = -1
Query: 335 DDAERYDHTVPR-GSAGQQL--QQAADTCRQHQLLWQSEHLG*HDQS*FRRSARNSRGEN 165
D E D V G A ++ + A CRQ Q S G HD S + R +N
Sbjct: 307 DGVEEGDEEVQAAGEAAVEISSENAGPGCRQSQSGGGSGEDGGHDDDDGEGSNKKRRRKN 366
Query: 164 HRRREKWCLRLQRGSQTESEVQHSRRGGEGRQHQFRERVAKSGLQEIRKKKK 9
+ R +R+ ES R+ + Q + + KS L++++ + +
Sbjct: 367 YHRHTAEQIRIMEALFKESPHPDERQRQQAVQERHENSLLKSELEKLQDEHR 418
>05_07_0215 - 28455890-28457095
Length = 401
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2
Query: 314 DRTVRHRRR*PFYEDRMRRQQLHSDRGGWT 403
DR+ RH + PF E R RR L SD G W+
Sbjct: 347 DRSTRHDPKIPFQEARARR-YLCSDNGKWS 375
>12_01_0432 - 3400942-3401361
Length = 139
Score = 29.1 bits (62), Expect = 4.5
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 250 CCRQVSAACCSCWPAL 297
CCR V AA CWPA+
Sbjct: 87 CCRAVRAATRDCWPAM 102
>09_04_0377 + 17086775-17088310
Length = 511
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +2
Query: 431 NDRALGPLPVLYRGVGLHVGRVSGVRPQLGDGIXQRLHVGARI 559
N+ +GP+P L R G H+ +RP GD I Q + G RI
Sbjct: 377 NEMPVGPMP-LPRAEG-HISYGGALRPGEGDAIAQYVQQGKRI 417
>07_03_1562 - 27738369-27738568,27738767-27738962,27739079-27739230,
27739775-27739832,27739923-27740038,27740117-27740237,
27740348-27740635,27740817-27740987,27741091-27741741,
27742515-27742676,27742764-27743904,27743992-27744152,
27744239-27744564,27745678-27745825
Length = 1296
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/52 (23%), Positives = 25/52 (48%)
Frame = -2
Query: 175 EEKITGDVKNGVCACKEEAKPSLRFSTRAEEERVDSINFENELQNQVYRKSE 20
E+ + + + CK+ AKP L+ +E++ ++ E + Q R +E
Sbjct: 1152 EDSVMNHFRTVIAKCKKFAKPDLKVCIEEFDEKLSKVHQEKKEQEATTRNAE 1203
>12_01_0236 -
1775941-1776034,1776185-1776504,1776569-1776786,
1777315-1777723
Length = 346
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = -2
Query: 214 MIKASLEEAPETPEEKITGDVKNGVCACKEEAKPSLRFSTRAEEERVDSINFENELQNQV 35
++ A LE EE + D V K + KP +RF RA + D + + ++ N
Sbjct: 238 LVSAVLEPLRFEGEEPLPRDALMKVFVSKPDVKPVMRFDCRAFADEGDGGSADYDVTNAC 297
Query: 34 Y 32
Y
Sbjct: 298 Y 298
>09_04_0195 -
15509412-15509580,15510136-15510467,15510494-15510900,
15511467-15511581,15512711-15514044,15514558-15514819
Length = 872
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 150 FTSPVIFSSGVSGASSKLALIMLAKMLG 233
F P+I + VS +S +ALI+LAK LG
Sbjct: 796 FEGPIILTGVVSTSSLLVALIILAKQLG 823
>07_03_1500 +
27001842-27002058,27002144-27002283,27002458-27002549,
27002680-27002776,27002871-27002951,27003031-27003263,
27003876-27004070,27004149-27004239,27004324-27004446,
27004542-27004692,27005060-27005262
Length = 540
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/55 (23%), Positives = 26/55 (47%)
Frame = -2
Query: 268 QILAGNINYCGNPSILANMIKASLEEAPETPEEKITGDVKNGVCACKEEAKPSLR 104
+++ + C NPSI+ ++ A+L ++ ET I D + K A ++
Sbjct: 306 EVIDSVVKACSNPSIIRSLFSATLPDSIETLARTIMHDAVRVIVGRKNSASSLIK 360
>12_01_0171 -
1268803-1269500,1271491-1271567,1271941-1272065,
1272146-1272234,1272851-1272936,1273509-1273765
Length = 443
Score = 28.3 bits (60), Expect = 7.8
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = -1
Query: 647 VLDKPIEETRKVNPQREALSRQEQNGGYIQSVRRHAAAVXSHHPAEAVHQIRGLREDLHH 468
VL+ P+EE K + E +SR+E Y+ S+RR ++ + V + RG+ HH
Sbjct: 140 VLNFPLEEYEKERSEMEGVSREE----YLASLRRRSSGF-----SRGVSKYRGVAR--HH 188
Query: 467 DTGQ 456
G+
Sbjct: 189 HNGR 192
>11_01_0169 -
1365984-1366681,1368669-1368745,1369133-1369257,
1369338-1369426,1370041-1370126,1370705-1370970
Length = 446
Score = 28.3 bits (60), Expect = 7.8
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = -1
Query: 647 VLDKPIEETRKVNPQREALSRQEQNGGYIQSVRRHAAAVXSHHPAEAVHQIRGLREDLHH 468
VL+ P+EE K + E +SR+E Y+ S+RR ++ + V + RG+ HH
Sbjct: 143 VLNFPLEEYEKERSEMEGVSREE----YLASLRRRSSGF-----SRGVSKYRGVAR--HH 191
Query: 467 DTGQ 456
G+
Sbjct: 192 HNGR 195
>05_03_0384 -
13361999-13362120,13362241-13362252,13362921-13362981,
13363049-13363202,13364653-13364788,13365020-13365290,
13365654-13365962
Length = 354
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = -1
Query: 524 HHPAEAVHQI---RGLREDLHHDTGQEGGPELDHLLQDLADATESTHRGHCGAV 372
HHP + V + + LHH+ Q+ GP +++ ++A+A + R C A+
Sbjct: 245 HHPIKKVMNLVTASKWSDPLHHEDDQQAGPLPNNVEINVAEANKWMRRTSCHAL 298
>05_03_0383 -
13352924-13353045,13353166-13353177,13353844-13353904,
13353972-13354125,13355576-13355711,13355943-13356138
Length = 226
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = -1
Query: 524 HHPAEAVHQI---RGLREDLHHDTGQEGGPELDHLLQDLADATESTHRGHCGAV 372
HHP + V + + LHH+ Q+ GP +++ ++A+A + R C A+
Sbjct: 117 HHPIKKVMNLVTASKWSDPLHHEDDQQAGPLPNNVEINVAEANKWMRRTSCHAL 170
>01_06_1678 -
39095986-39096205,39096400-39096477,39096578-39096949,
39097374-39097671,39097867-39098077,39098331-39099023
Length = 623
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 419 GPEVNDRALGPLPVLYRGVGLHVGRVSGVRPQLGDGIXQRLHVGARI 559
GP RA G V +GVG +V +++G+ P G + L VG +
Sbjct: 186 GPPDPVRARGDWLVFPKGVGTYVEQLAGMVPLRGGEVRTALDVGCGV 232
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,256,122
Number of Sequences: 37544
Number of extensions: 472468
Number of successful extensions: 1622
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1617
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2256438528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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