Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_H04
(821 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 55 7e-10
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 55 7e-10
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 54 1e-09
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 27 0.16
AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein. 23 2.6
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 23 4.5
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 23 4.5
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 23 4.5
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 23 4.5
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 23 4.5
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 6.0
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 7.9
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 55.2 bits (127), Expect = 7e-10
Identities = 26/75 (34%), Positives = 40/75 (53%)
Frame = -2
Query: 523 ITQLRPYTRYAAYVKTYTTIQDRKGAQSSIIYFRTLPMQPSPPTAVTVELLTPHSIFIKW 344
+T LR YT Y V +T + D G +++ Y +T P P + V + +P ++FI W
Sbjct: 1177 LTGLRKYTNYTIQVLAFTRVGD--GVPTTVTYCQTEEDVPGSPADIKVVVSSPQALFISW 1234
Query: 343 SPPTMPNGTIILYHV 299
PP PNG I Y++
Sbjct: 1235 LPPLEPNGIITKYNL 1249
Score = 44.0 bits (99), Expect = 2e-06
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = -2
Query: 523 ITQLRPYTRYAAYVKTYTTIQDRKGAQSSIIYFRTLPMQPS-PPTAVTVELLTPHSIFIK 347
+T LRPYT+Y V+ Y Q G S + +T+ PS PP V LT S+ +
Sbjct: 1074 LTGLRPYTKYTLVVQAYN--QVGSGPLSEPLLTQTMEDVPSIPPEDVRCAALTSQSLQVS 1131
Query: 346 WSPP--TMPNGTIILYHVEVQ 290
W PP T NG I Y + +
Sbjct: 1132 WQPPPNTHSNGIIQGYKLHYE 1152
Score = 38.3 bits (85), Expect = 8e-05
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Frame = -2
Query: 538 PLXYP--ITQLRPYTRYAAYVKTYTTIQDRKGAQSSIIYFRTLPMQPS-PPTAVTVELLT 368
PL Y I +L+P TRY ++ + S+ + RT P +P+ PP + L+
Sbjct: 962 PLPYAALIDELKPATRYT--IRVIAEGPAGRSVPSAELIVRTEPQRPAGPPINLEARALS 1019
Query: 367 PHSIFIKWSP--PTMPNGTIILYHVEVQANSYNRP 269
I I WSP P + +G I ++V + S + P
Sbjct: 1020 SSEILITWSPPLPELRHGDIQGFNVGYRETSSSNP 1054
Score = 23.4 bits (48), Expect = 2.6
Identities = 8/34 (23%), Positives = 15/34 (44%)
Frame = -2
Query: 406 PSPPTAVTVELLTPHSIFIKWSPPTMPNGTIILY 305
P PP ++ ++ SI +KW + + Y
Sbjct: 908 PQPPNSLETAMVASRSINVKWQHKSQDTTEVTKY 941
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 55.2 bits (127), Expect = 7e-10
Identities = 26/75 (34%), Positives = 40/75 (53%)
Frame = -2
Query: 523 ITQLRPYTRYAAYVKTYTTIQDRKGAQSSIIYFRTLPMQPSPPTAVTVELLTPHSIFIKW 344
+T LR YT Y V +T + D G +++ Y +T P P + V + +P ++FI W
Sbjct: 1173 LTGLRKYTNYTIQVLAFTRVGD--GVPTTVTYCQTEEDVPGSPADIKVVVSSPQALFISW 1230
Query: 343 SPPTMPNGTIILYHV 299
PP PNG I Y++
Sbjct: 1231 LPPLEPNGIITKYNL 1245
Score = 44.0 bits (99), Expect = 2e-06
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = -2
Query: 523 ITQLRPYTRYAAYVKTYTTIQDRKGAQSSIIYFRTLPMQPS-PPTAVTVELLTPHSIFIK 347
+T LRPYT+Y V+ Y Q G S + +T+ PS PP V LT S+ +
Sbjct: 1070 LTGLRPYTKYTLVVQAYN--QVGSGPLSEPLLTQTMEDVPSIPPEDVRCAALTSQSLQVS 1127
Query: 346 WSPP--TMPNGTIILYHVEVQ 290
W PP T NG I Y + +
Sbjct: 1128 WQPPPNTHSNGIIQGYKLHYE 1148
Score = 38.3 bits (85), Expect = 8e-05
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Frame = -2
Query: 538 PLXYP--ITQLRPYTRYAAYVKTYTTIQDRKGAQSSIIYFRTLPMQPS-PPTAVTVELLT 368
PL Y I +L+P TRY ++ + S+ + RT P +P+ PP + L+
Sbjct: 958 PLPYAALIDELKPATRYT--IRVIAEGPAGRSVPSAELIVRTEPQRPAGPPINLEARALS 1015
Query: 367 PHSIFIKWSP--PTMPNGTIILYHVEVQANSYNRP 269
I I WSP P + +G I ++V + S + P
Sbjct: 1016 SSEILITWSPPLPELRHGDIQGFNVGYRETSSSNP 1050
Score = 23.4 bits (48), Expect = 2.6
Identities = 8/34 (23%), Positives = 15/34 (44%)
Frame = -2
Query: 406 PSPPTAVTVELLTPHSIFIKWSPPTMPNGTIILY 305
P PP ++ ++ SI +KW + + Y
Sbjct: 904 PQPPNSLETAMVASRSINVKWQHKSQDTTEVTKY 937
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 54.4 bits (125), Expect = 1e-09
Identities = 27/82 (32%), Positives = 44/82 (53%)
Frame = -2
Query: 514 LRPYTRYAAYVKTYTTIQDRKGAQSSIIYFRTLPMQPSPPTAVTVELLTPHSIFIKWSPP 335
L+ YT Y+ V +T+ D G +S+ I+ +T P P A+ +++ SI + W PP
Sbjct: 1146 LKKYTNYSMQVLAFTSGGD--GVKSAPIHCQTEQDAPEAPIAIKALVMSSESILVSWRPP 1203
Query: 334 TMPNGTIILYHVEVQANSYNRP 269
+ PNG I Y V +A++ P
Sbjct: 1204 SQPNGVITQYTVYTKADNAEEP 1225
Score = 38.7 bits (86), Expect = 6e-05
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Frame = -2
Query: 523 ITQLRPYTRYAAYVKTYTTIQDRKGAQSSIIYFRTLPMQPS-PPTAVTVELLTPHSIFIK 347
+ LRP T Y +++ + S + T PS PPT++ V+ L H++ +
Sbjct: 939 VFNLRPATTY--HLRIVAENEIGASDPSDTVTIITAEEAPSGPPTSIRVDDLDQHTLKVT 996
Query: 346 WSPPTMP--NGTIILYHVEVQANSYNRP 269
W PP NG I+ Y+V + +S +P
Sbjct: 997 WKPPPREDWNGEILGYYVGYRLSSSEKP 1024
Score = 31.9 bits (69), Expect = 0.007
Identities = 27/80 (33%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Frame = -2
Query: 523 ITQLRPYTRYAAYVKTYTTIQDRKGAQSSIIYFRTLPMQPS-PPTAVTVELLTPHSIFIK 347
I L+ YT+Y+ V+ + + G S T P PP T LT +I I
Sbjct: 1044 IMNLKTYTQYSVVVQAFNKVGS--GPMSEERRQHTAEGVPEQPPHDTTCTTLTSQTIRIS 1101
Query: 346 W-SPP-TMPNGTIILYHVEV 293
W SPP + NG I Y V V
Sbjct: 1102 WMSPPLSAANGVITGYKVIV 1121
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 27.5 bits (58), Expect = 0.16
Identities = 33/141 (23%), Positives = 54/141 (38%), Gaps = 9/141 (6%)
Frame = -1
Query: 653 WKVLDKPIEETRKVNPQREALSRQEQNGGYIQSVRRHAAAVXSHHPAEAVHQ---IRGLR 483
WKV +EE + Q E + + + + +A+ V P + ++Q GL
Sbjct: 585 WKVRPSTVEEREEFRRQ-ERMRYAAPHKAFTYRMHGYASVVG---PVKGIYQHNVASGLT 640
Query: 482 EDLHHDTGQEGGPELDHLLQDLADAT------ESTHRGHCGAVDAAFDLHKMVTADDAER 321
+ H P +L + DAT E T C + + + + +DD E
Sbjct: 641 KARGHSLLVADRPNFVTILALVRDATARLPNGEGTRADICQLLKDSQYIREQTESDDKEG 700
Query: 320 YDHTVPRGSAGQQLQQAADTC 258
Y H+V G A +L D C
Sbjct: 701 YLHSVVSG-ALDRLHYETDPC 720
>AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein.
Length = 238
Score = 23.4 bits (48), Expect = 2.6
Identities = 13/61 (21%), Positives = 27/61 (44%)
Frame = -1
Query: 701 EKNVTXYDQRDACXDIWKVLDKPIEETRKVNPQREALSRQEQNGGYIQSVRRHAAAVXSH 522
+ ++T D C D+ ++ ++ETR ++ L+ E++ SV + H
Sbjct: 167 KSDITELDVSKRCKDLASFMENLLQETRTPGFGKDVLATDERSFSEHDSVM--LGEISPH 224
Query: 521 H 519
H
Sbjct: 225 H 225
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 4.5
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = +2
Query: 407 LHRQGPEVNDRALGPLPVLYRGVGLHVGRVSGVRPQLGDGIXQRLH 544
+H+ P N + L L + GVG +VG + G+ LH
Sbjct: 129 IHKDLPINNVQGLRGLKSCHTGVGRNVGYKIPITKLTAMGVLNNLH 174
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 4.5
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = +2
Query: 407 LHRQGPEVNDRALGPLPVLYRGVGLHVGRVSGVRPQLGDGIXQRLH 544
+H+ P N + L L + GVG +VG + G+ LH
Sbjct: 129 IHKDLPINNVQGLRGLKSCHTGVGRNVGYKIPITKLTAMGVLNNLH 174
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 4.5
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = +2
Query: 407 LHRQGPEVNDRALGPLPVLYRGVGLHVGRVSGVRPQLGDGIXQRLH 544
+H+ P N + L L + GVG +VG + G+ LH
Sbjct: 129 IHKDLPINNVQGLRGLKSCHTGVGRNVGYKIPITKLTAMGVLNNLH 174
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 22.6 bits (46), Expect = 4.5
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3
Query: 45 CNSFSKLMLSTLSSSARVLNLRLGLASSLQ 134
CN F K LS SSS L L L +S++
Sbjct: 719 CNMFRKTNLSGDSSSGTTLLLELDDIASME 748
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 22.6 bits (46), Expect = 4.5
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +2
Query: 92 ASAEPQTRFGFLFASANTIFHVAGDFLLWSFG 187
AS +PQ G AS N + A DF+ +G
Sbjct: 578 ASVQPQVISGNPVASVNMVGERAADFIKEDWG 609
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 22.2 bits (45), Expect = 6.0
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = -1
Query: 131 QRGSQTESEVQHSRRGGEGRQHQFRER 51
Q+ Q + + Q ++ + +QHQ RER
Sbjct: 1213 QQQQQQQQQQQQQQQQQQQQQHQARER 1239
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.8 bits (44), Expect = 7.9
Identities = 9/43 (20%), Positives = 21/43 (48%)
Frame = -1
Query: 701 EKNVTXYDQRDACXDIWKVLDKPIEETRKVNPQREALSRQEQN 573
+ ++T D C D+ + ++ETR ++ L+ E++
Sbjct: 461 KSDITELDVSKRCKDLASFMGNLLQETRTPGFGKDVLATDERS 503
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,741
Number of Sequences: 438
Number of extensions: 4524
Number of successful extensions: 31
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26217432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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