Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_T7_G18
         (857 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0540 + 9340379-9340592,9341250-9342988                           40   0.003
11_08_0075 + 28173220-28173433,28175348-28177083                       39   0.006
05_05_0109 - 22454539-22456268,22457069-22457279                       39   0.006
03_06_0484 + 34233042-34233258,34235317-34237049                       38   0.010
03_02_0546 - 9381989-9383733,9385838-9386054                           38   0.014
01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229     38   0.014
02_01_0112 - 839048-839552,839638-839720,839828-839982,840078-84...    37   0.024
05_04_0052 - 17515344-17517353                                         32   0.51 
08_01_0654 - 5639419-5641449                                           31   0.89 
05_04_0392 - 20889699-20891726                                         31   0.89 

>03_02_0540 + 9340379-9340592,9341250-9342988
          Length = 650

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 16/33 (48%), Positives = 21/33 (63%)
 Frame = -2

Query: 385 WVDSXQMADKXGYXHKXKELXGIXNPIXTXMYQ 287
           W+DS Q+A+   +  K KEL G+ NPI   MYQ
Sbjct: 586 WLDSNQLAEAEEFEDKMKELEGVCNPIIAKMYQ 618


>11_08_0075 + 28173220-28173433,28175348-28177083
          Length = 649

 Score = 38.7 bits (86), Expect = 0.006
 Identities = 16/34 (47%), Positives = 21/34 (61%)
 Frame = -2

Query: 388 KWVDSXQMADKXGYXHKXKELXGIXNPIXTXMYQ 287
           +W+D  Q+A+   +  K KEL GI NPI   MYQ
Sbjct: 585 QWLDGNQLAEADEFDDKMKELEGICNPIIAKMYQ 618


>05_05_0109 - 22454539-22456268,22457069-22457279
          Length = 646

 Score = 38.7 bits (86), Expect = 0.006
 Identities = 16/33 (48%), Positives = 21/33 (63%)
 Frame = -2

Query: 385 WVDSXQMADKXGYXHKXKELXGIXNPIXTXMYQ 287
           W+D+ Q+A+   +  K KEL GI NPI   MYQ
Sbjct: 585 WLDTNQLAEADEFEDKMKELEGICNPIIAKMYQ 617


>03_06_0484 + 34233042-34233258,34235317-34237049
          Length = 649

 Score = 37.9 bits (84), Expect = 0.010
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = -2

Query: 388 KWVDSXQMADKXGYXHKXKELXGIXNPIXTXMYQ 287
           +W+D+ Q+A+   +  K KEL G+ NPI   MYQ
Sbjct: 586 QWLDNNQLAEVEEFEDKMKELEGLCNPIIAKMYQ 619


>03_02_0546 - 9381989-9383733,9385838-9386054
          Length = 653

 Score = 37.5 bits (83), Expect = 0.014
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = -2

Query: 388 KWVDSXQMADKXGYXHKXKELXGIXNPIXTXMYQ 287
           KW+D  Q+A+   +  K KEL  + NPI + MYQ
Sbjct: 586 KWLDGNQLAEADEFEDKMKELESLCNPIISKMYQ 619


>01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229
          Length = 841

 Score = 37.5 bits (83), Expect = 0.014
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = -2

Query: 385 WVDSXQMADKXGYXHKXKELXGIXNPIXTXMYQ 287
           W+DS Q+A+   +  K KEL  I NPI   MYQ
Sbjct: 778 WLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 810


>02_01_0112 -
           839048-839552,839638-839720,839828-839982,840078-840557,
           840855-841097,841189-841403,841489-841756,842477-842525
          Length = 665

 Score = 36.7 bits (81), Expect = 0.024
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = -2

Query: 388 KWVDSXQMADKXGYXHKXKELXGIXNPIXTXMYQ 287
           +W+D  Q A+K  Y  K KE+  + NPI + +YQ
Sbjct: 609 EWLDENQTAEKEEYEEKLKEVEAVCNPIISAVYQ 642


>05_04_0052 - 17515344-17517353
          Length = 669

 Score = 32.3 bits (70), Expect = 0.51
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -2

Query: 388 KWVDSXQMADKXGYXHKXKELXGIXNPIXTXMYQ 287
           +W+D  Q   K  Y  K +EL  + NP+ + +YQ
Sbjct: 616 EWLDGNQDVGKEEYEEKLRELEDVCNPVMSAVYQ 649


>08_01_0654 - 5639419-5641449
          Length = 676

 Score = 31.5 bits (68), Expect = 0.89
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -2

Query: 388 KWVDSXQMADKXGYXHKXKELXGIXNPIXTXMYQ 287
           +W+D    A K  Y  K +EL  + NP+ + +YQ
Sbjct: 619 EWLDGNPDAGKEEYEEKLRELEDVCNPVMSAVYQ 652


>05_04_0392 - 20889699-20891726
          Length = 675

 Score = 31.5 bits (68), Expect = 0.89
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -2

Query: 388 KWVDSXQMADKXGYXHKXKELXGIXNPIXTXMYQ 287
           +W+D    A K  Y  K +EL  + NP+ + +YQ
Sbjct: 619 EWLDGNPDAGKEEYEEKLRELEDVCNPVMSAVYQ 652


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,862,736
Number of Sequences: 37544
Number of extensions: 173450
Number of successful extensions: 210
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 210
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)