Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_T7_G18
         (857 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z80223-1|CAB02319.1|  640|Caenorhabditis elegans Hypothetical pr...    48   1e-05
M18540-1|AAA28078.1|  640|Caenorhabditis elegans protein ( C.ele...    39   0.005
Z83108-5|CAB05508.1|  645|Caenorhabditis elegans Hypothetical pr...    32   0.45 
Z83108-4|CAB05507.1|  645|Caenorhabditis elegans Hypothetical pr...    32   0.45 
Z81467-1|CAB03871.1|  643|Caenorhabditis elegans Hypothetical pr...    30   1.8  

>Z80223-1|CAB02319.1|  640|Caenorhabditis elegans Hypothetical
           protein F26D10.3 protein.
          Length = 640

 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 18/41 (43%), Positives = 28/41 (68%)
 Frame = -2

Query: 409 NKCNXTXKWVDSXQMADKXGYXHKXKELXGIXNPIXTXMYQ 287
           +KC+   KW+DS Q A+K  + H+ K+L G+ NPI + +YQ
Sbjct: 573 DKCDEILKWLDSNQTAEKEEFEHQQKDLEGLANPIISKLYQ 613


>M18540-1|AAA28078.1|  640|Caenorhabditis elegans protein (
           C.elegans heat shockprotein 70A gene, complete cds. ).
          Length = 640

 Score = 38.7 bits (86), Expect = 0.005
 Identities = 15/41 (36%), Positives = 25/41 (60%)
 Frame = -2

Query: 409 NKCNXTXKWVDSXQMADKXGYXHKXKELXGIXNPIXTXMYQ 287
           +KC+   KW+DS Q A+K  +  + K+L G+  P  + +YQ
Sbjct: 573 DKCDEILKWLDSNQTAEKEEFESQQKDLEGLAKPDLSKLYQ 613


>Z83108-5|CAB05508.1|  645|Caenorhabditis elegans Hypothetical
           protein F44E5.5 protein.
          Length = 645

 Score = 32.3 bits (70), Expect = 0.45
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -2

Query: 394 TXKWVDSXQMADKXGYXHKXKELXGIXNPIXTXMYQ 287
           T +W+DS  +A+K     K KEL  +   I T M+Q
Sbjct: 576 TLRWLDSNSLAEKDEIEAKDKELKSVCQSILTKMHQ 611


>Z83108-4|CAB05507.1|  645|Caenorhabditis elegans Hypothetical
           protein F44E5.4 protein.
          Length = 645

 Score = 32.3 bits (70), Expect = 0.45
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -2

Query: 394 TXKWVDSXQMADKXGYXHKXKELXGIXNPIXTXMYQ 287
           T +W+DS  +A+K     K KEL  +   I T M+Q
Sbjct: 576 TLRWLDSNSLAEKDEIEAKDKELKSVCQSILTKMHQ 611


>Z81467-1|CAB03871.1|  643|Caenorhabditis elegans Hypothetical
           protein C12C8.1 protein.
          Length = 643

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = -2

Query: 394 TXKWVDSXQMADKXGYXHKXKELXGIXNPIXTXMYQ 287
           T +W++   +ADK     K KEL  I   I T M+Q
Sbjct: 576 TLRWMERNTLADKDEIEAKDKELKSICQDILTKMHQ 611


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,615,894
Number of Sequences: 27780
Number of extensions: 133972
Number of successful extensions: 175
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 175
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)