Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_G09
(804 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC114377-1|AAI14378.1| 44|Homo sapiens Unknown (protein for MG... 56 2e-07
AL513550-4|CAI17194.1| 805|Homo sapiens RP11-98I9.2 protein. 32 2.8
AL080186-1|CAB45767.1| 299|Homo sapiens hypothetical protein pr... 32 2.8
AF314185-1|AAL76164.1| 283|Homo sapiens SR rich protein protein. 32 2.8
AF314184-1|AAL76163.1| 805|Homo sapiens SR rich protein protein. 32 2.8
BC048251-1|AAH48251.1| 322|Homo sapiens ZDHHC12 protein protein. 31 6.4
AL441992-6|CAI15406.1| 210|Homo sapiens zinc finger, DHHC-type ... 31 6.4
AK126665-1|BAC86634.1| 1012|Homo sapiens protein ( Homo sapiens ... 31 6.4
AB127405-1|BAD03968.1| 1183|Homo sapiens SNAP-25-interacting pro... 31 6.4
AB051471-1|BAB21775.1| 762|Homo sapiens KIAA1684 protein protein. 31 6.4
AL731571-3|CAI16102.1| 985|Homo sapiens C-terminal binding prot... 30 8.5
AF222711-1|AAG45951.1| 985|Homo sapiens ribeye protein. 30 8.5
>BC114377-1|AAI14378.1| 44|Homo sapiens Unknown (protein for
MGC:134704) protein.
Length = 44
Score = 55.6 bits (128), Expect = 2e-07
Identities = 29/44 (65%), Positives = 32/44 (72%)
Frame = +2
Query: 587 MIGRADIEGSKSNVAMNAWLPQASYPGG*LFWHLLLKTLYTKGS 718
MIGRADIEGSKS+VAMNAW PQASYP G LK ++GS
Sbjct: 1 MIGRADIEGSKSDVAMNAWPPQASYPCGNFSDTSCLKPKRSEGS 44
>AL513550-4|CAI17194.1| 805|Homo sapiens RP11-98I9.2 protein.
Length = 805
Score = 31.9 bits (69), Expect = 2.8
Identities = 15/43 (34%), Positives = 27/43 (62%)
Frame = +1
Query: 511 SRRSKPSSHSLLMGEQSNAWRILLRNDRKSRHRRIKKQRRYER 639
+RRS+ S+S + +SN R+ +R+ R+S I+++RR R
Sbjct: 568 ARRSRSRSYSRRIKIESNRARVKIRDRRRSNRNSIERERRRNR 610
>AL080186-1|CAB45767.1| 299|Homo sapiens hypothetical protein
protein.
Length = 299
Score = 31.9 bits (69), Expect = 2.8
Identities = 15/43 (34%), Positives = 27/43 (62%)
Frame = +1
Query: 511 SRRSKPSSHSLLMGEQSNAWRILLRNDRKSRHRRIKKQRRYER 639
+RRS+ S+S + +SN R+ +R+ R+S I+++RR R
Sbjct: 62 ARRSRSRSYSRRIKIESNRARVKIRDRRRSNRNSIERERRRNR 104
>AF314185-1|AAL76164.1| 283|Homo sapiens SR rich protein protein.
Length = 283
Score = 31.9 bits (69), Expect = 2.8
Identities = 15/43 (34%), Positives = 27/43 (62%)
Frame = +1
Query: 511 SRRSKPSSHSLLMGEQSNAWRILLRNDRKSRHRRIKKQRRYER 639
+RRS+ S+S + +SN R+ +R+ R+S I+++RR R
Sbjct: 46 ARRSRSRSYSRRIKIESNRARVKIRDRRRSNRNSIERERRRNR 88
>AF314184-1|AAL76163.1| 805|Homo sapiens SR rich protein protein.
Length = 805
Score = 31.9 bits (69), Expect = 2.8
Identities = 15/43 (34%), Positives = 27/43 (62%)
Frame = +1
Query: 511 SRRSKPSSHSLLMGEQSNAWRILLRNDRKSRHRRIKKQRRYER 639
+RRS+ S+S + +SN R+ +R+ R+S I+++RR R
Sbjct: 568 ARRSRSRSYSRRIKIESNRARVKIRDRRRSNRNSIERERRRNR 610
>BC048251-1|AAH48251.1| 322|Homo sapiens ZDHHC12 protein protein.
Length = 322
Score = 30.7 bits (66), Expect = 6.4
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -1
Query: 363 TPLRPKPA*PNPARICSLWSPEXRE 289
TP P P P PA +CS SPE R+
Sbjct: 68 TPTPPTPVLPGPASLCSPASPELRQ 92
>AL441992-6|CAI15406.1| 210|Homo sapiens zinc finger, DHHC-type
containing 12 protein.
Length = 210
Score = 30.7 bits (66), Expect = 6.4
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -1
Query: 363 TPLRPKPA*PNPARICSLWSPEXRE 289
TP P P P PA +CS SPE R+
Sbjct: 68 TPTPPTPVLPGPASLCSPASPELRQ 92
>AK126665-1|BAC86634.1| 1012|Homo sapiens protein ( Homo sapiens
cDNA FLJ44709 fis, clone BRACE3019570, highly similar
to Rattus norvegicus SNAP-25-interacting protein (SNIP).
).
Length = 1012
Score = 30.7 bits (66), Expect = 6.4
Identities = 21/52 (40%), Positives = 24/52 (46%)
Frame = +1
Query: 388 ASHHRPLGRVHEPNVRNCGSSRTEQYYYRNDKPSVG*N*PVSRRSKPSSHSL 543
A H + EP+ R GS YR +KPS P RRS PSSH L
Sbjct: 841 APHGQKAAPRTEPSGRR-GSDELTVPRYRTEKPSKSPPPPPPRRSFPSSHGL 891
>AB127405-1|BAD03968.1| 1183|Homo sapiens SNAP-25-interacting protein
protein.
Length = 1183
Score = 30.7 bits (66), Expect = 6.4
Identities = 21/52 (40%), Positives = 24/52 (46%)
Frame = +1
Query: 388 ASHHRPLGRVHEPNVRNCGSSRTEQYYYRNDKPSVG*N*PVSRRSKPSSHSL 543
A H + EP+ R GS YR +KPS P RRS PSSH L
Sbjct: 969 APHGQKAAPRTEPSGRR-GSDELTVPRYRTEKPSKSPPPPPPRRSFPSSHGL 1019
>AB051471-1|BAB21775.1| 762|Homo sapiens KIAA1684 protein protein.
Length = 762
Score = 30.7 bits (66), Expect = 6.4
Identities = 21/52 (40%), Positives = 24/52 (46%)
Frame = +1
Query: 388 ASHHRPLGRVHEPNVRNCGSSRTEQYYYRNDKPSVG*N*PVSRRSKPSSHSL 543
A H + EP+ R GS YR +KPS P RRS PSSH L
Sbjct: 548 APHGQKAAPRTEPSGRR-GSDELTVPRYRTEKPSKSPPPPPPRRSFPSSHGL 598
>AL731571-3|CAI16102.1| 985|Homo sapiens C-terminal binding protein
2 protein.
Length = 985
Score = 30.3 bits (65), Expect = 8.5
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +2
Query: 20 YESPWRRAESQQIAARRCSTEHNTPPGT 103
YE PW AES + RR S + T GT
Sbjct: 22 YEGPWENAESLRPLGRRSSLTYGTAEGT 49
>AF222711-1|AAG45951.1| 985|Homo sapiens ribeye protein.
Length = 985
Score = 30.3 bits (65), Expect = 8.5
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +2
Query: 20 YESPWRRAESQQIAARRCSTEHNTPPGT 103
YE PW AES + RR S + T GT
Sbjct: 22 YEGPWENAESLRPLGRRSSLTYGTAEGT 49
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,341,554
Number of Sequences: 237096
Number of extensions: 2574534
Number of successful extensions: 5248
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5248
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9924838204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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