Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_G03
(785 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15 |Schizosac... 37 0.003
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 37 0.004
SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces p... 31 0.19
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 30 0.33
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 30 0.43
SPAC222.06 |mak16||nuclear HMG-like acidic protein Mak16|Schizos... 30 0.43
SPBC83.09c |||GYF domain|Schizosaccharomyces pombe|chr 2|||Manual 29 0.57
SPBC3B8.09 |||U3 snoRNP-associated protein Utp3 |Schizosaccharom... 29 0.57
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 29 0.76
SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|... 29 0.76
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 29 0.76
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 28 1.3
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 28 1.3
SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr ... 28 1.7
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 28 1.7
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 27 2.3
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 27 2.3
SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynei... 27 2.3
SPAC29E6.02 |prp3|SPAC30.06|U4/U6 x U5 tri-snRNP complex subunit... 27 2.3
SPAC29B12.02c |set2||histone lysine methyltransferase Set2 |Schi... 27 3.0
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 27 3.0
SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces p... 27 3.0
SPAC26F1.09 |gyp51||GTPase activating protein Gyp51 |Schizosacch... 27 3.0
SPAC1B3.09c |||Noc2p-Noc3p complex subunit Noc2 family |Schizosa... 27 3.0
SPAC1002.04c |taf11||transcription factor TFIID complex subunit ... 27 3.0
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 27 3.0
SPAC17H9.04c |||RNA-binding protein|Schizosaccharomyces pombe|ch... 27 4.0
SPCC24B10.22 ||SPCPB16A4.01|mitochondrial DNA polymerase gamma c... 27 4.0
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 27 4.0
SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase Ino80|Schizo... 27 4.0
SPAC1142.04 |||Noc2p-Noc3p complex subunit Noc2 family |Schizosa... 26 5.3
SPBC16C6.08c |qcr6||ubiquinol-cytochrome-c reductase complex sub... 26 5.3
SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145 |Schizo... 26 5.3
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 26 5.3
SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9 |Schizosacchar... 26 5.3
SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces pom... 26 5.3
SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces pomb... 26 5.3
SPAC3H5.06c |pol1|swi7, polA|DNA polymerase alpha catalytic subu... 26 7.0
SPBC216.06c |swi1||replication fork protection complex subunit S... 26 7.0
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 26 7.0
SPAC1952.02 |||ribosome biogenesis protein|Schizosaccharomyces p... 25 9.3
SPBC428.17c |||conserved fungal protein|Schizosaccharomyces pomb... 25 9.3
SPAC6B12.05c |||chromatin remodeling complex subunit |Schizosacc... 25 9.3
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 25 9.3
>SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 265
Score = 37.1 bits (82), Expect = 0.003
Identities = 35/126 (27%), Positives = 57/126 (45%)
Frame = -2
Query: 574 VQYRDTRTLRKHAERIHRQLHQQKRKEEKEETIDEVKKKLDNTTETSNMSANEDKLWADV 395
V+ +D R AE H Q+ EE + + K ++ T S +DK DV
Sbjct: 48 VRKQDLREALLRAEAAH--FATQEHGASSEE-VSQNSKLIEGFTSPST----DDKPNNDV 100
Query: 394 DKDIGELLREVDPQGNEGTDDEEDLDRYEKFRKTDTKKAKNIESENNESIVLNSSGEKKS 215
+ D ELLR+ + +D ++ +D K + K+ K ES + ES+ +SS + S
Sbjct: 101 EVDYQELLRQTLEADEDASDSDDSVDSSNKNSEVSIKRRKT-ESNSQESV--DSSNSESS 157
Query: 214 VEVNTS 197
E + S
Sbjct: 158 DEESDS 163
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 36.7 bits (81), Expect = 0.004
Identities = 29/116 (25%), Positives = 52/116 (44%), Gaps = 5/116 (4%)
Frame = -2
Query: 535 ERIHRQLHQQKRK-EEKEETIDEVKKKLDNTTETSNMSANEDKLWADVDKDIGELLREVD 359
+ + QL+Q K + E E I +L + + ANE KL ++ E + +
Sbjct: 816 QELQSQLNQDKNQIETLNERISAAADELSSMESINKNQANELKLAKQKCSNLQEKINFGN 875
Query: 358 PQGNEGTDD----EEDLDRYEKFRKTDTKKAKNIESENNESIVLNSSGEKKSVEVN 203
E T+ E+DL+ K T +K+ K ++SEN+ +++ + K VN
Sbjct: 876 KLAKEHTEKISSLEKDLEAATKTASTLSKELKTVKSENDSLKSVSNDDQNKEKSVN 931
>SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 526
Score = 31.1 bits (67), Expect = 0.19
Identities = 21/73 (28%), Positives = 32/73 (43%)
Frame = -2
Query: 484 ETIDEVKKKLDNTTETSNMSANEDKLWADVDKDIGELLREVDPQGNEGTDDEEDLDRYEK 305
E D+ D E + M+ ED+ VD+ GE E+D +E +DE+ EK
Sbjct: 23 EDDDDADMDQDKNPEENVMNEKEDEDVDAVDEKSGEEDVEMDTMEDENENDEDTEQTSEK 82
Query: 304 FRKTDTKKAKNIE 266
+T K +E
Sbjct: 83 KETEETPKENPLE 95
Score = 25.8 bits (54), Expect = 7.0
Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = -2
Query: 394 DKDIGELLREVDPQGNEGTDDE-EDLDRYEKFRKTDTKKAKNIESENNESIVLNSSGEKK 218
D D ++ ++ +P+ N + E ED+D ++ + + +E EN + EKK
Sbjct: 24 DDDDADMDQDKNPEENVMNEKEDEDVDAVDEKSGEEDVEMDTMEDENENDEDTEQTSEKK 83
Query: 217 SVE 209
E
Sbjct: 84 ETE 86
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 30.3 bits (65), Expect = 0.33
Identities = 20/109 (18%), Positives = 56/109 (51%)
Frame = -2
Query: 523 RQLHQQKRKEEKEETIDEVKKKLDNTTETSNMSANEDKLWADVDKDIGELLREVDPQGNE 344
+ + +QK+ ++KEE+ E + + +++E+ + S+ + ++ + E +
Sbjct: 69 KSVKKQKKSKKKEESSSESESE-SSSSESESSSSESESSSSESESSSSE--------SSS 119
Query: 343 GTDDEEDLDRYEKFRKTDTKKAKNIESENNESIVLNSSGEKKSVEVNTS 197
+EE + + E+ +++ ++ + + ESE E V+ +K+S ++S
Sbjct: 120 SESEEEVIVKTEEKKESSSESSSSSESEEEEEAVVKIEEKKESSSDSSS 168
Score = 29.9 bits (64), Expect = 0.43
Identities = 22/93 (23%), Positives = 40/93 (43%)
Frame = -2
Query: 502 RKEEKEETIDEVKKKLDNTTETSNMSANEDKLWADVDKDIGELLREVDPQGNEGTDDEED 323
+ EEK+E+ E ++ E + E+K + D E + + + +EE+
Sbjct: 129 KTEEKKESSSESSSSSESEEEEEAVVKIEEKKESSSDSSSESSSSESESESSSSESEEEE 188
Query: 322 LDRYEKFRKTDTKKAKNIESENNESIVLNSSGE 224
E KT+ KK + ES ++ +SS E
Sbjct: 189 ----EVVEKTEEKKEGSSESSSDSESSSDSSSE 217
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 29.9 bits (64), Expect = 0.43
Identities = 26/120 (21%), Positives = 53/120 (44%), Gaps = 3/120 (2%)
Frame = -2
Query: 568 YRDTRTLRKHAERIHRQLHQQKRKEEKE-ETIDEVKKKLDNTTETSNMSANEDKLWADVD 392
YR+ ++ A+ + + KRK+E+E + I E +KK D + ++ E++ + +
Sbjct: 560 YREKVAQQRQAKLLEEIEEENKRKQERELKKIREKEKKRDKKKQL-KLAKEEERQRREAE 618
Query: 391 KDIGELLREVDPQGNEGTDDEEDLDRYE--KFRKTDTKKAKNIESENNESIVLNSSGEKK 218
+ L + + E EE + E + ++ KK + +E + E EKK
Sbjct: 619 R----LAEQAAQKALEAKRQEEARKKREEQRLKREQEKKQQELERQKREEKQKQKEREKK 674
>SPAC222.06 |mak16||nuclear HMG-like acidic protein
Mak16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 29.9 bits (64), Expect = 0.43
Identities = 22/97 (22%), Positives = 41/97 (42%)
Frame = -2
Query: 496 EEKEETIDEVKKKLDNTTETSNMSANEDKLWADVDKDIGELLREVDPQGNEGTDDEEDLD 317
EE+EE + + + + + +S ED L +D + E E + D++E D
Sbjct: 201 EEEEEREEAELEFVSDDEDEEEISDLEDWLGSDQSMETSESEEEESSESESDEDEDE--D 258
Query: 316 RYEKFRKTDTKKAKNIESENNESIVLNSSGEKKSVEV 206
K RK T AK + I + E+++ ++
Sbjct: 259 NKGKIRKRKTDDAKKSRKKRAPHIHIEYEQERENEKI 295
>SPBC83.09c |||GYF domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 408
Score = 29.5 bits (63), Expect = 0.57
Identities = 22/107 (20%), Positives = 49/107 (45%), Gaps = 7/107 (6%)
Frame = -2
Query: 517 LHQQKRKEEKEETIDEVKKKLDNTTETSNMSANEDKLW-ADVDKDIGELLREVDPQGNEG 341
L+++K++ + E+ + + T D + D ++ + LR + N+
Sbjct: 54 LNKEKKEGQSEDMFSDTSEDEKRTLPNDEAQKRRDFIENGDAERLAHKGLRNKEVL-NDD 112
Query: 340 TDDEEDLDRYEKFR------KTDTKKAKNIESENNESIVLNSSGEKK 218
+DDE+D +Y K R + DT +A +++++ S + S K+
Sbjct: 113 SDDEDDNGKYSKLRYEDIEGQEDTNQANDLDADEEGSEISVPSSPKR 159
>SPBC3B8.09 |||U3 snoRNP-associated protein Utp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 597
Score = 29.5 bits (63), Expect = 0.57
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = -2
Query: 340 TDDEEDLDRYEKFRKTDTKKAKNIESENNESIVLNSSGEKKSVEVN 203
++DEED+D +E + + K+I ++ I L K + N
Sbjct: 327 SEDEEDVDMHESISDNENEGIKDIPVAEDDDITLKFRAAKSKINTN 372
Score = 29.5 bits (63), Expect = 0.57
Identities = 19/64 (29%), Positives = 33/64 (51%)
Frame = -2
Query: 442 ETSNMSANEDKLWADVDKDIGELLREVDPQGNEGTDDEEDLDRYEKFRKTDTKKAKNIES 263
E + N+D AD+D + E + + + +D++DLD YE K +K AK +
Sbjct: 443 EAAARGRNQDA-GADLDDEDPESMG-IPANVDREVEDQDDLDYYESLDK-KSKMAKKLRK 499
Query: 262 ENNE 251
EN++
Sbjct: 500 ENHD 503
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 29.1 bits (62), Expect = 0.76
Identities = 23/98 (23%), Positives = 48/98 (48%), Gaps = 12/98 (12%)
Frame = -2
Query: 475 DEVKKKLDNTTETSNMSANEDKLWADVDKDIGELLREVDPQGNEGTDDE----------- 329
DE +++D T +T S+++ K+ ++ + EL R+++ G
Sbjct: 274 DEYARQVD-TLDTKLNSSSKSKVQEEISRLKSEL-RDLEKSGGSSNSKPVVVRPKKRNIL 331
Query: 328 -EDLDRYEKFRKTDTKKAKNIESENNESIVLNSSGEKK 218
E+L++Y+K +K K KN+E++ ++ SS + K
Sbjct: 332 TEELEKYKKSKKVVLGKRKNLENDEESTLRALSSFQSK 369
>SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1184
Score = 29.1 bits (62), Expect = 0.76
Identities = 29/128 (22%), Positives = 52/128 (40%), Gaps = 7/128 (5%)
Frame = -2
Query: 571 QYRDTRTLRKHAERIHRQLHQQKRKEEKEETIDEV------KKKLDNTTETSNMSANEDK 410
Q R+ + K A+R+ + ++KR ++KEE + K++ + S SA+ D+
Sbjct: 711 QERERKEQAKEAKRLKKLAKEEKRLKKKEEKARKAEEKRLQKERAKYAKQMSRESAHADQ 770
Query: 409 LWADVDKDIGELL-REVDPQGNEGTDDEEDLDRYEKFRKTDTKKAKNIESENNESIVLNS 233
A+ E +P E ++EE +R E+ N E E E +
Sbjct: 771 AIANTGPVAPPYFEHETEPSHYEEEEEEEPEERREESSHFSESSGNN-EFEETEQEYTHG 829
Query: 232 SGEKKSVE 209
G V+
Sbjct: 830 YGNDVLVQ 837
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 29.1 bits (62), Expect = 0.76
Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Frame = -2
Query: 550 LRKHAERIHRQLHQQKRKEEKEETIDEVKKKLDNTTETSNMSAN-------EDKLWADVD 392
LRK AE ++ KEE ++ I E+ +L++ +N N E +L DV
Sbjct: 1354 LRKEAEMTENIHSLEEGKEETKKEIAELSSRLEDNQLATNKLKNQLDHLNQEIRLKEDVL 1413
Query: 391 KDIGELLREVDPQ-GNEGTDDEEDLDRYEKFRK--TDTKKAKNIESENNESIVLNSSGEK 221
K+ L+ ++ N+ + LD + DT + + E ESI NSS +
Sbjct: 1414 KEKESLIISLEESLSNQRQKESSLLDAKNELEHMLDDTSRKNSSLMEKIESI--NSSLDD 1471
Query: 220 KSVEV 206
KS E+
Sbjct: 1472 KSFEL 1476
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 28.3 bits (60), Expect = 1.3
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Frame = -2
Query: 475 DEVKKKLDNTTETSNMSANEDKLWADVDKDIGELLREVDPQGNEGTDDEE---DLDRYEK 305
D+ ++L N +T+N S ++ +++ D+ + ++ NE +D EE DLD
Sbjct: 3930 DDDLEELANEEDTANQSDLDESEARELESDMNGVTKDSVVSENENSDSEEENQDLDEEVN 3989
Query: 304 FRKTDTKKAKN--IESENNESIVLNSSGEKKSVE 209
D + N + E NE +L + E+KS E
Sbjct: 3990 DIPEDLSNSLNEKLWDEPNEEDLLET--EQKSNE 4021
Score = 27.5 bits (58), Expect = 2.3
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Frame = -2
Query: 535 ERIHRQLHQQKRKEEKEETIDEVKKKLDNTTETSNMS---ANEDKLWADVDKDIGELLRE 365
E + L+++ E EE + E ++K + + +N S + ED A DKD E E
Sbjct: 3993 EDLSNSLNEKLWDEPNEEDLLETEQKSNEQSAANNESDLVSKEDDNKALEDKDRQEKEDE 4052
Query: 364 VDPQGNEGTDDEEDLDRYE 308
+ + G DDE D E
Sbjct: 4053 EEMSDDVGIDDEIQPDIQE 4071
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 28.3 bits (60), Expect = 1.3
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 307 FHICLGPLHHQFLHFLVGPLLEEVLQCLYQH 399
F +CL L +FL L+ ++ ++L CL+ H
Sbjct: 860 FELCLDNLTQEFLDPLLDSIMPDLLICLWNH 890
>SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 266
Score = 27.9 bits (59), Expect = 1.7
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = -2
Query: 496 EEKEETIDEVKKKLDNTTETSNMSANEDKLWADVDKDIGELLREVDPQGNEGTDDEEDLD 317
++KE+ +DE K+L+N +T + + +D E E+ + T +E LD
Sbjct: 73 KDKEKPLDEKVKELENANKTLSDLVRR----IQIQRDEAEQKAEIYNRDALNT-KQEHLD 127
Query: 316 RYEKFRKTDTKKAK-NIESENNESIVLNSSGE 224
++ K+D K E+EN + ++ N E
Sbjct: 128 IKKRLEKSDETVCKLKEENENLQDMLRNVGNE 159
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 27.9 bits (59), Expect = 1.7
Identities = 26/97 (26%), Positives = 44/97 (45%)
Frame = -2
Query: 493 EKEETIDEVKKKLDNTTETSNMSANEDKLWADVDKDIGELLREVDPQGNEGTDDEEDLDR 314
E++ + E K+ D + S E+K ++D G+ E D + E TD E D+
Sbjct: 415 EEKSDVGEEKESKDENNKASLHKDVEEKDTKITNEDTGKT--ETDVKAKE-TDSIEANDK 471
Query: 313 YEKFRKTDTKKAKNIESENNESIVLNSSGEKKSVEVN 203
EK TD+K+ ++ E + E S+EV+
Sbjct: 472 DEK---TDSKETEDKVEETESKEADVKAKETDSIEVD 505
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 27.5 bits (58), Expect = 2.3
Identities = 21/95 (22%), Positives = 45/95 (47%)
Frame = -2
Query: 487 EETIDEVKKKLDNTTETSNMSANEDKLWADVDKDIGELLREVDPQGNEGTDDEEDLDRYE 308
++T D ++N + S++ + + + D+D+ E E D + N+ DDE++ + E
Sbjct: 217 DDTNDGTDDDINNNEYKDDESSSGSESY-ERDEDVDEEEEEDDDENNDEGDDEDENENDE 275
Query: 307 KFRKTDTKKAKNIESENNESIVLNSSGEKKSVEVN 203
+++ + NE +N SG ++ E N
Sbjct: 276 --LRSENGSPNPSAAVINEQENMNMSGIEEYDETN 308
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 27.5 bits (58), Expect = 2.3
Identities = 16/58 (27%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = -2
Query: 559 TRTLRKHAERIHRQLHQQKRKEEKEETIDEV--KKKLDNTTETSNMSANEDKLWADVD 392
T + + +ER + + H+ +++ +T++E K K D+T++TSN+ A+VD
Sbjct: 605 TDEITQLSERYNDKCHEFDELQKRLQTLEEENNKAKEDSTSKTSNLLEQLKMTEAEVD 662
>SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynein
Mcp5/Num1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 968
Score = 27.5 bits (58), Expect = 2.3
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -2
Query: 454 DNTTETSNMSANE-DKLWADVDKDIGELLREVDPQGNEGTDDEEDLD 317
D T + N+S+ + AD+ K I L + V P+ + +DE D D
Sbjct: 329 DTKTPSPNLSSEIIENTKADIKKSIRSLNKAVSPENSIDIEDETDRD 375
Score = 27.1 bits (57), Expect = 3.0
Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Frame = -2
Query: 508 QKRKEEKEETIDEVKKKLDNTTETSNMSANEDKLWADVD-KDIGELLREVDPQGNEGTDD 332
Q +++ E+ + + KKL E+ +S N++K ++ ++ L E+ +G
Sbjct: 183 QGQRDLLEQRLQGLMKKLTEV-ESLTVSLNDEKNKLTLELTNLRICLHELQLNAEKG--- 238
Query: 331 EEDLDRYEKFRKTDTKKAKNIESENNESIVLNSSGEK 221
E +D E D+K E EN++S+ L SS +K
Sbjct: 239 -ETIDESE-----DSKNTLVTEDENDDSVFLESSSDK 269
>SPAC29E6.02 |prp3|SPAC30.06|U4/U6 x U5 tri-snRNP complex subunit
Prp3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 542
Score = 27.5 bits (58), Expect = 2.3
Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 9/102 (8%)
Frame = -2
Query: 547 RKHAERIHRQLHQQKRKEEKE------ETIDEVKKKLDNTTETSNMSANED--KLWADVD 392
+K ++I RQ + RKE+++ E + K KL N A +D K+ A+V
Sbjct: 299 KKEQKKIRRQTRAEARKEKQDRQLLGIEPPEPPKVKLSNLMHVLGDDAIKDPTKIEAEVR 358
Query: 391 KDIGELLREVDPQGNEGTDDEEDLDRYEK-FRKTDTKKAKNI 269
K + E + + E E +R EK FRK D A +
Sbjct: 359 KQVEERRLRHERENEERKLTPE--ERKEKAFRKKDEDSAAGL 398
>SPAC29B12.02c |set2||histone lysine methyltransferase Set2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 798
Score = 27.1 bits (57), Expect = 3.0
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -2
Query: 547 RKHAERIHRQLHQQKRKEEKEETIDEVKKKLDNTTETSNMSANED 413
++ ERI +Q ++KR+ EE++ KKL S+ A D
Sbjct: 642 KEEEERIAQQKREEKRRLAYEESLKRHAKKLHEKKTKSSQDATID 686
>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
Cut14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1172
Score = 27.1 bits (57), Expect = 3.0
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = -2
Query: 484 ETIDEVKKKLDNTTETSNMSANE--DKLWADVDKDIGELLREVDPQGN 347
+TI KKK+ +T ++ + +K W +V+ GE+ E+ P GN
Sbjct: 1007 KTIHRDKKKIQDTVKSIDRFKRSALEKTWREVNSSFGEIFDELLP-GN 1053
>SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 555
Score = 27.1 bits (57), Expect = 3.0
Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = -2
Query: 568 YRDTRTLRKHAERIHRQLHQQKRKEEKEETI-DEVKKKLDNTTETSNMSAN 419
Y+ R + H RIH ++KR+ EK + I + ++ ++N E +N S++
Sbjct: 477 YKYVREIESH--RIHFSKEEEKREREKSKGIRGQEEEFIENADEDNNDSSS 525
>SPAC26F1.09 |gyp51||GTPase activating protein Gyp51
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1031
Score = 27.1 bits (57), Expect = 3.0
Identities = 18/76 (23%), Positives = 33/76 (43%)
Frame = -2
Query: 424 ANEDKLWADVDKDIGELLREVDPQGNEGTDDEEDLDRYEKFRKTDTKKAKNIESENNESI 245
ANE ++ + +K+ +++RE + + E TDD D + +N+ N E
Sbjct: 6 ANEREVQSSYEKENVKIIREEEAKDQESTDDIAVEDGTGTSPDLNFFSTQNVMQMNFEDE 65
Query: 244 VLNSSGEKKSVEVNTS 197
S E E++ S
Sbjct: 66 YSEFSNEDDEAEIDNS 81
>SPAC1B3.09c |||Noc2p-Noc3p complex subunit Noc2 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 528
Score = 27.1 bits (57), Expect = 3.0
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -2
Query: 520 QLHQQKRKEEKEETIDEVK-KKLDNTTETSNMSANEDKLWADVDKDIGELLREVD 359
Q+ QKR+ EK+ +KL T + D LW +V+KD+ E L VD
Sbjct: 96 QVSTQKRRSEKDLLAAIAYCQKLSGTNQA-------DALWKNVEKDLKETLDNVD 143
>SPAC1002.04c |taf11||transcription factor TFIID complex subunit
Taf11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 199
Score = 27.1 bits (57), Expect = 3.0
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -2
Query: 334 DEEDLDRYEKFRKTDTKKAKNIESENNESIVLNSS 230
DEE + RYE FR+ + K N++ N+ +LN S
Sbjct: 101 DEEQMQRYEVFRRANLNKT-NVKKLANQ--ILNQS 132
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 27.1 bits (57), Expect = 3.0
Identities = 20/77 (25%), Positives = 39/77 (50%)
Frame = -2
Query: 535 ERIHRQLHQQKRKEEKEETIDEVKKKLDNTTETSNMSANEDKLWADVDKDIGELLREVDP 356
ERI Q QQ+RKEE+++ + E K++ + ++ +L + G + + + P
Sbjct: 133 ERIRLQ-EQQRRKEERDQKLRE-KEEAQRLRQEQILNKERQQLKLNNFFTKG-VEKRIAP 189
Query: 355 QGNEGTDDEEDLDRYEK 305
N D ++L+ +EK
Sbjct: 190 NENFVADKTDELNEFEK 206
Score = 26.6 bits (56), Expect = 4.0
Identities = 10/27 (37%), Positives = 20/27 (74%)
Frame = -2
Query: 565 RDTRTLRKHAERIHRQLHQQKRKEEKE 485
++ R +K AER+ R+ +Q+R++EK+
Sbjct: 86 QEERIRQKEAERLKREKERQQREQEKK 112
>SPAC17H9.04c |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 604
Score = 26.6 bits (56), Expect = 4.0
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = +1
Query: 553 CECHGTAHIARDGDEVDSGAAQPLSVRHHRSRRALXMCGKAHTTT 687
CE H + DG ++ + S+R SR + CG A + T
Sbjct: 39 CEIHEICWVILDGKTLEKQHCESCSIREDSSRHGI--CGSASSLT 81
>SPCC24B10.22 ||SPCPB16A4.01|mitochondrial DNA polymerase gamma
catalytic subunit|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1018
Score = 26.6 bits (56), Expect = 4.0
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +2
Query: 323 VLFIISSFISLWVHFSKKFSNVFINISPQFVFICRHI*SFSSIV 454
+L ++ I+ H + VF + PQF+ +C H +FS+++
Sbjct: 341 ILQKLNELITYCAHDTYSTHQVFKKVFPQFLEVCPHPATFSAML 384
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 26.6 bits (56), Expect = 4.0
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Frame = -2
Query: 496 EEKEETIDEVKKKLDNTTETSNMSANEDKLWADVDKDIGELLREVDPQGNEGTDDEEDLD 317
+ K+ T + KKL+N+T S ++ K +D K I E + EGT D +
Sbjct: 873 DPKKSTQRDSSKKLENSTVVSGSPSSSSK--SDAAKSIKPQKPEPALKPVEGTADPKSTK 930
Query: 316 R-YEKFRKT-DTKKAKNIESENNESIVLNSSGEKKSVEVNTS 197
R +++ KT DT + + ++ +N ++ V+ + S
Sbjct: 931 RNHQETEKTADTDVSSTEPVKRQKTADVNDDVGEEEVKQSVS 972
>SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase
Ino80|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1604
Score = 26.6 bits (56), Expect = 4.0
Identities = 31/134 (23%), Positives = 59/134 (44%), Gaps = 13/134 (9%)
Frame = -2
Query: 565 RDTRTLRKHAERIHRQLHQQKRKE-----EKEETIDEVK---KKLDNTTETSNMSANEDK 410
R+T K ER+ R L ++ +E +KEE + E + +KLD + + ++
Sbjct: 687 RETMVFWKRNERVERDLRKKAEREALDRAKKEEELRESRRQARKLDFLITQTELYSHFVG 746
Query: 409 LWADVDKDIGELLREVD-PQGNEGTDDEEDLDRYE-KFRKTDTKKAK---NIESENNESI 245
D ++D+ + N +D+EED+ R + + +KA+ + N +
Sbjct: 747 RKMDREQDLPSATNTASVSEINFDSDEEEDIRRLAVESAQEAVQKAREHSQLFDANRQQS 806
Query: 244 VLNSSGEKKSVEVN 203
NSS + E+N
Sbjct: 807 PNNSSSDMNEGEMN 820
>SPAC1142.04 |||Noc2p-Noc3p complex subunit Noc2 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 707
Score = 26.2 bits (55), Expect = 5.3
Identities = 22/97 (22%), Positives = 44/97 (45%), Gaps = 11/97 (11%)
Frame = -2
Query: 475 DEVKKKLDNTTETSNMSANEDKLWADVDKDIGELLREVDPQGNEGTDDEEDLDRYEK--F 302
D++KKK + S E K + +D+ + ++ V+ + DD +D + + F
Sbjct: 21 DKIKKKDTDKGIRQKHSKKEGKD-ETLKRDVEKFIQNVNSEDTPSEDDSMSMDAFLEGGF 79
Query: 301 RKTDT---------KKAKNIESENNESIVLNSSGEKK 218
+ D+ +K KN+ +EN + SS E++
Sbjct: 80 EELDSANSNDAGSSRKRKNLPNENTQDSTSESSEEEE 116
>SPBC16C6.08c |qcr6||ubiquinol-cytochrome-c reductase complex
subunit 8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 214
Score = 26.2 bits (55), Expect = 5.3
Identities = 18/65 (27%), Positives = 28/65 (43%)
Frame = -2
Query: 499 KEEKEETIDEVKKKLDNTTETSNMSANEDKLWADVDKDIGELLREVDPQGNEGTDDEEDL 320
KEEK+ETI ++ + E K + K+ E +E + E ++EE
Sbjct: 88 KEEKKETIQPPEEVKTEPPQPEEKEGKEAKEPEEPPKEEAEEPQEGGEEEEEEEEEEEIT 147
Query: 319 DRYEK 305
D EK
Sbjct: 148 DPLEK 152
>SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 26.2 bits (55), Expect = 5.3
Identities = 12/53 (22%), Positives = 27/53 (50%)
Frame = -2
Query: 556 RTLRKHAERIHRQLHQQKRKEEKEETIDEVKKKLDNTTETSNMSANEDKLWAD 398
R ++ ++ Q+ ++K+K +E+T K N+ + ++ N D L+ D
Sbjct: 36 RNNKQKNKKSRNQVRREKKKLLREKTNSGAKLAEKNSDDKDQLTENNDNLYND 88
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 26.2 bits (55), Expect = 5.3
Identities = 20/78 (25%), Positives = 32/78 (41%)
Frame = -2
Query: 568 YRDTRTLRKHAERIHRQLHQQKRKEEKEETIDEVKKKLDNTTETSNMSANEDKLWADVDK 389
+ + + +R + ++RQ +EE E + D T N S NED L V+K
Sbjct: 149 FLNRKIVRTNTSLLYRQKKFNLLREESEGFSHLMINFFDALTCLRNKSLNEDYLIVQVNK 208
Query: 388 DIGELLREVDPQGNEGTD 335
I + D N+ D
Sbjct: 209 SIISTIGAFDLDPNKVLD 226
>SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 524
Score = 26.2 bits (55), Expect = 5.3
Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = -2
Query: 463 KKLDNTTETSNMSANEDKLWAD--VDKDIGELLREVDPQGNEGTDDEEDLDRYEKFRKTD 290
+K + TS KL + ++D+ + E + G E DEE+ D YE +
Sbjct: 12 RKRKARSATSKREKENQKLERNGPANEDLASISSESEFNGFEDEIDEENEDTYETAAEKR 71
Query: 289 TKKAKNIESENNESIVLNSSGEKKSVE 209
+ A+ E +V + + K V+
Sbjct: 72 LRLAREYLDEVKNELVEDGGFDAKEVD 98
>SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1562
Score = 26.2 bits (55), Expect = 5.3
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -2
Query: 490 KEETIDEVKKKLDNTTETSNMSANEDKLWADVDKDIGELLR 368
+++ +DE ++ E + +A EDKL V + I L R
Sbjct: 1053 RQQLLDEAADLIEKDLEFAGATAIEDKLQVGVPESINSLFR 1093
>SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 26.2 bits (55), Expect = 5.3
Identities = 22/99 (22%), Positives = 40/99 (40%), Gaps = 5/99 (5%)
Frame = -2
Query: 493 EKEETIDEVKKKLDNTTETSNMSAN-EDKLWADVDKDIGELLREVDPQGNEGTDDEEDLD 317
E E + E K D E +++A ++ + + G E+ P E DDEE+ +
Sbjct: 37 ETESSSHEPSFKKDVDEEIPSLTAELSEEEEGEYSSESGRSTPELSPDDFEDADDEEEFE 96
Query: 316 R----YEKFRKTDTKKAKNIESENNESIVLNSSGEKKSV 212
Y T+ ES +E++ +N + K +
Sbjct: 97 EIDAGYSSDSSTEDVAPGLYESPYDENLYINYDIDGKKI 135
>SPAC3H5.06c |pol1|swi7, polA|DNA polymerase alpha catalytic subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1405
Score = 25.8 bits (54), Expect = 7.0
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = -1
Query: 668 PHIXNARRDRWCRTDRGCAAPLSTS 594
P+ + WCR + GC++P + S
Sbjct: 485 PNFDAVKNASWCRVEIGCSSPQNIS 509
>SPBC216.06c |swi1||replication fork protection complex subunit
Swi1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 971
Score = 25.8 bits (54), Expect = 7.0
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -2
Query: 349 NEGTDDEEDLDRYEKFRKTDTKKAKNIESENNESIVLNSSG 227
N TD ++LD +++FRK T++ K+ + N + +G
Sbjct: 291 NIKTDGLDELDSHKRFRKRGTRR-KHFDDINKSFFINTEAG 330
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 25.8 bits (54), Expect = 7.0
Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 6/91 (6%)
Frame = -2
Query: 574 VQYRDTRTLRKHAERIHRQLHQQKRKEEKEETIDEVKKKLDNTTETSNMSANEDK----- 410
V D + + E + + +EE EE +E ++ D + A D+
Sbjct: 88 VNNNDKKEDEDNVEENEEEADANEEEEEDEEDDEEDEEDEDESGGGRRKRARHDRRNQFL 147
Query: 409 -LWADVDKDIGELLREVDPQGNEGTDDEEDL 320
+ A+VD+D EL E D G E EE++
Sbjct: 148 DIEAEVDEDEEELEDEEDEIGREDGFIEEEV 178
>SPAC1952.02 |||ribosome biogenesis protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 25.4 bits (53), Expect = 9.3
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = -2
Query: 550 LRKHAERIHRQLHQQKRKEEKEETIDEVKKK 458
+RK + + + + K+K+EK+E D++KKK
Sbjct: 130 VRKTSGKESSKREKSKKKKEKKEKKDKLKKK 160
>SPBC428.17c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 602
Score = 25.4 bits (53), Expect = 9.3
Identities = 9/35 (25%), Positives = 21/35 (60%)
Frame = -2
Query: 523 RQLHQQKRKEEKEETIDEVKKKLDNTTETSNMSAN 419
+ +H+ + E++ +DE++ +D T + N SA+
Sbjct: 163 KSIHELRFAGEQQRIVDEIEYLVDGVTFSGNSSAS 197
>SPAC6B12.05c |||chromatin remodeling complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 295
Score = 25.4 bits (53), Expect = 9.3
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = -2
Query: 544 KHAERIHRQLHQQKRK--EEKEETIDEVKKKLDNT 446
+ E R+ +Q +R+ EEK ETI+ + K+ NT
Sbjct: 202 RRIENARRRKNQSERRLEEEKMETINRLLKRQSNT 236
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 25.4 bits (53), Expect = 9.3
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Frame = -2
Query: 535 ERIHRQLHQQKRKEEKEETIDEVKKKLDNTTETSNMSANED-KLWADVDKDIGELLREVD 359
+ I + ++K ++EETID+ K ++ ++S E+ + + + K EL E++
Sbjct: 419 QEISNHVAEEKIDSDEEETIDDAKSEM-----FVDLSEEEEVRQYEEYRKKQKELQEELE 473
Query: 358 -PQGNEGTDDEEDLDRYEKFR 299
P E +E +R++K+R
Sbjct: 474 FPDEVELQPNELARERFKKYR 494
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,709,144
Number of Sequences: 5004
Number of extensions: 53343
Number of successful extensions: 307
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 302
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 381366860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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