Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_T7_G02
         (792 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69903-5|CAH60762.2|  497|Caenorhabditis elegans Hypothetical pr...    30   2.2  
Z69903-4|CAA93775.3|  479|Caenorhabditis elegans Hypothetical pr...    30   2.2  
Z69903-3|CAI79241.1|  480|Caenorhabditis elegans Hypothetical pr...    30   2.2  
AY836558-1|AAW21316.1|  479|Caenorhabditis elegans casein kinase...    30   2.2  
AY836556-1|AAW21314.1|  479|Caenorhabditis elegans casein kinase...    30   2.2  
Z46241-7|CAA86320.1|  214|Caenorhabditis elegans Hypothetical pr...    29   3.8  
AL110485-29|CAB60376.3|  732|Caenorhabditis elegans Hypothetical...    28   6.7  

>Z69903-5|CAH60762.2|  497|Caenorhabditis elegans Hypothetical
           protein F46F2.2c protein.
          Length = 497

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 26/108 (24%), Positives = 44/108 (40%)
 Frame = -3

Query: 439 PPAILSPFSSPPSIEQPKPRQRQHSNSEPELVPVMKKIDETPGYENIMKENQRIIKNXXX 260
           PP I      PP ++Q +P Q  H  ++P++ P M    +  G+     +   I      
Sbjct: 84  PPPI-QQHQQPPLLQQAQPSQIPHP-TQPQIDPTM--FTQQSGFNWPPIDPNTIAALAQA 139

Query: 259 XXXXXXXXRALNGIETDPTLVSNLLKESLAKPVPISVPTEKKSPIEVK 116
                        +  DPTL+S+ L      PVP  +   KK+ +E++
Sbjct: 140 QLASSHAQFVSLALTLDPTLLSHFLATQQIPPVPQPL-VHKKAEMELR 186


>Z69903-4|CAA93775.3|  479|Caenorhabditis elegans Hypothetical
           protein F46F2.2a protein.
          Length = 479

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 26/108 (24%), Positives = 44/108 (40%)
 Frame = -3

Query: 439 PPAILSPFSSPPSIEQPKPRQRQHSNSEPELVPVMKKIDETPGYENIMKENQRIIKNXXX 260
           PP I      PP ++Q +P Q  H  ++P++ P M    +  G+     +   I      
Sbjct: 84  PPPI-QQHQQPPLLQQAQPSQIPHP-TQPQIDPTM--FTQQSGFNWPPIDPNTIAALAQA 139

Query: 259 XXXXXXXXRALNGIETDPTLVSNLLKESLAKPVPISVPTEKKSPIEVK 116
                        +  DPTL+S+ L      PVP  +   KK+ +E++
Sbjct: 140 QLASSHAQFVSLALTLDPTLLSHFLATQQIPPVPQPL-VHKKAEMELR 186


>Z69903-3|CAI79241.1|  480|Caenorhabditis elegans Hypothetical
           protein F46F2.2d protein.
          Length = 480

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 26/108 (24%), Positives = 44/108 (40%)
 Frame = -3

Query: 439 PPAILSPFSSPPSIEQPKPRQRQHSNSEPELVPVMKKIDETPGYENIMKENQRIIKNXXX 260
           PP I      PP ++Q +P Q  H  ++P++ P M    +  G+     +   I      
Sbjct: 84  PPPI-QQHQQPPLLQQAQPSQIPHP-TQPQIDPTM--FTQQSGFNWPPIDPNTIAALAQA 139

Query: 259 XXXXXXXXRALNGIETDPTLVSNLLKESLAKPVPISVPTEKKSPIEVK 116
                        +  DPTL+S+ L      PVP  +   KK+ +E++
Sbjct: 140 QLASSHAQFVSLALTLDPTLLSHFLATQQIPPVPQPL-VHKKAEMELR 186


>AY836558-1|AAW21316.1|  479|Caenorhabditis elegans casein kinase I
           epsilon/delta kin-20C protein.
          Length = 479

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 26/108 (24%), Positives = 44/108 (40%)
 Frame = -3

Query: 439 PPAILSPFSSPPSIEQPKPRQRQHSNSEPELVPVMKKIDETPGYENIMKENQRIIKNXXX 260
           PP I      PP ++Q +P Q  H  ++P++ P M    +  G+     +   I      
Sbjct: 84  PPPI-QQHQQPPLLQQAQPSQIPHP-TQPQIDPTM--FTQQSGFNWPPIDPNTIAALAQA 139

Query: 259 XXXXXXXXRALNGIETDPTLVSNLLKESLAKPVPISVPTEKKSPIEVK 116
                        +  DPTL+S+ L      PVP  +   KK+ +E++
Sbjct: 140 QLASSHAQFVSLALTLDPTLLSHFLATQQIPPVPQPL-VHKKAEMELR 186


>AY836556-1|AAW21314.1|  479|Caenorhabditis elegans casein kinase I
           epsilon/delta kin-20A protein.
          Length = 479

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 26/108 (24%), Positives = 44/108 (40%)
 Frame = -3

Query: 439 PPAILSPFSSPPSIEQPKPRQRQHSNSEPELVPVMKKIDETPGYENIMKENQRIIKNXXX 260
           PP I      PP ++Q +P Q  H  ++P++ P M    +  G+     +   I      
Sbjct: 84  PPPI-QQHQQPPLLQQAQPSQIPHP-TQPQIDPTM--FTQQSGFNWPPIDPNTIAALAQA 139

Query: 259 XXXXXXXXRALNGIETDPTLVSNLLKESLAKPVPISVPTEKKSPIEVK 116
                        +  DPTL+S+ L      PVP  +   KK+ +E++
Sbjct: 140 QLASSHAQFVSLALTLDPTLLSHFLATQQIPPVPQPL-VHKKAEMELR 186


>Z46241-7|CAA86320.1|  214|Caenorhabditis elegans Hypothetical
           protein C38D4.9 protein.
          Length = 214

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -3

Query: 397 EQPKPRQRQHSNSEPELVPVMKKIDETPGYE 305
           E+PK +  Q++ S    V +M+ IDET G+E
Sbjct: 17  EKPKIKLEQYATSSELAVSMMEMIDETIGFE 47


>AL110485-29|CAB60376.3|  732|Caenorhabditis elegans Hypothetical
           protein Y46G5A.10 protein.
          Length = 732

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
 Frame = -3

Query: 403 SIEQPKPRQ--RQHSNSEPELVPVMKKIDETPGYE--NIMKENQR 281
           SI++ +PR   R H +SE   +P  + I +TP     N+ +E QR
Sbjct: 451 SIDRSEPRHHHRHHVHSETPELPYTRGISKTPSVREYNVKREGQR 495


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,706,105
Number of Sequences: 27780
Number of extensions: 160737
Number of successful extensions: 839
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 813
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)