BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_F24
(885 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80918-1|AAD00451.1| 930|Homo sapiens transcription factor prot... 31 4.2
U19927-1|AAC50140.1| 502|Homo sapiens WAS protein. 31 4.2
U12707-1|AAA62663.1| 502|Homo sapiens Wiskott-Aldrich syndrome ... 31 4.2
BC012738-1|AAH12738.1| 502|Homo sapiens Wiskott-Aldrich syndrom... 31 4.2
BC002961-1|AAH02961.1| 514|Homo sapiens WAS protein protein. 31 4.2
AF115549-1|AAD26691.1| 502|Homo sapiens Wiskott-Aldrich Syndrom... 31 4.2
BC065551-1|AAH65551.1| 440|Homo sapiens WAS/WASL interacting pr... 31 5.6
AJ431177-1|CAD24007.1| 440|Homo sapiens WIRE protein protein. 31 5.6
AB043786-1|BAB85113.1| 440|Homo sapiens WICH protein. 31 5.6
BC077730-1|AAH77730.1| 250|Homo sapiens mannosidase, endo-alpha... 31 7.3
AL929472-6|CAH70081.1| 457|Homo sapiens mannosidase, endo-alpha... 31 7.3
AF499137-1|AAQ07403.1| 903|Homo sapiens synaptopodin protein. 31 7.3
AF499136-1|AAQ07402.1| 903|Homo sapiens synaptopodin protein. 31 7.3
AB028952-1|BAA82981.2| 1015|Homo sapiens KIAA1029 protein protein. 31 7.3
>U80918-1|AAD00451.1| 930|Homo sapiens transcription factor protein.
Length = 930
Score = 31.5 bits (68), Expect = 4.2
Identities = 19/67 (28%), Positives = 26/67 (38%), Gaps = 2/67 (2%)
Frame = -2
Query: 659 PXRPGPRXVXPQXITPRXXAXXPGAGAXLXPRSPRXAXXPHHRXPT--XPXAPXPPXAXA 486
P +P P + Q P + PG L P SP P + PT P +P P A
Sbjct: 801 PGQPPPALLPQQVSAPPSSSCPPGLEHSLCPSSPSPPLPPATQEPTCLQPCSPACPPATG 860
Query: 485 SXRRXPA 465
+ P+
Sbjct: 861 RPQHLPS 867
>U19927-1|AAC50140.1| 502|Homo sapiens WAS protein.
Length = 502
Score = 31.5 bits (68), Expect = 4.2
Identities = 27/88 (30%), Positives = 28/88 (31%), Gaps = 7/88 (7%)
Frame = -2
Query: 659 PXRPGPRXVXPQXITPRXXAXXPGAGAXLXP------RS-PRXAXXPHHRXPTXPXAPXP 501
P P P + P TPR PG G P RS P P P P P P
Sbjct: 341 PLPPVPLGIAPPPPTPRGPPP-PGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPP 399
Query: 500 PXAXASXRRXPAXXPXPXPXAXXRGAQP 417
P S PA P P G P
Sbjct: 400 PPPPPSSGNGPAPPPLPPALVPAGGLAP 427
>U12707-1|AAA62663.1| 502|Homo sapiens Wiskott-Aldrich syndrome
protein protein.
Length = 502
Score = 31.5 bits (68), Expect = 4.2
Identities = 27/88 (30%), Positives = 28/88 (31%), Gaps = 7/88 (7%)
Frame = -2
Query: 659 PXRPGPRXVXPQXITPRXXAXXPGAGAXLXP------RS-PRXAXXPHHRXPTXPXAPXP 501
P P P + P TPR PG G P RS P P P P P P
Sbjct: 341 PLPPVPLGIAPPPPTPRGPPP-PGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPP 399
Query: 500 PXAXASXRRXPAXXPXPXPXAXXRGAQP 417
P S PA P P G P
Sbjct: 400 PPPPPSSGNGPAPPPLPPALVPAGGLAP 427
>BC012738-1|AAH12738.1| 502|Homo sapiens Wiskott-Aldrich syndrome
(eczema-thrombocytopenia) protein.
Length = 502
Score = 31.5 bits (68), Expect = 4.2
Identities = 27/88 (30%), Positives = 28/88 (31%), Gaps = 7/88 (7%)
Frame = -2
Query: 659 PXRPGPRXVXPQXITPRXXAXXPGAGAXLXP------RS-PRXAXXPHHRXPTXPXAPXP 501
P P P + P TPR PG G P RS P P P P P P
Sbjct: 341 PLPPVPLGIAPPPPTPRGPPP-PGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPP 399
Query: 500 PXAXASXRRXPAXXPXPXPXAXXRGAQP 417
P S PA P P G P
Sbjct: 400 PPPPPSSGNGPAPPPLPPALVPAGGLAP 427
>BC002961-1|AAH02961.1| 514|Homo sapiens WAS protein protein.
Length = 514
Score = 31.5 bits (68), Expect = 4.2
Identities = 27/88 (30%), Positives = 28/88 (31%), Gaps = 7/88 (7%)
Frame = -2
Query: 659 PXRPGPRXVXPQXITPRXXAXXPGAGAXLXP------RS-PRXAXXPHHRXPTXPXAPXP 501
P P P + P TPR PG G P RS P P P P P P
Sbjct: 353 PLPPVPLGIAPPPPTPRGPPP-PGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPP 411
Query: 500 PXAXASXRRXPAXXPXPXPXAXXRGAQP 417
P S PA P P G P
Sbjct: 412 PPPPPSSGNGPAPPPLPPALVPAGGLAP 439
>AF115549-1|AAD26691.1| 502|Homo sapiens Wiskott-Aldrich Syndrome
protein protein.
Length = 502
Score = 31.5 bits (68), Expect = 4.2
Identities = 27/88 (30%), Positives = 28/88 (31%), Gaps = 7/88 (7%)
Frame = -2
Query: 659 PXRPGPRXVXPQXITPRXXAXXPGAGAXLXP------RS-PRXAXXPHHRXPTXPXAPXP 501
P P P + P TPR PG G P RS P P P P P P
Sbjct: 341 PLPPVPLGIAPPPPTPRGPPP-PGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPP 399
Query: 500 PXAXASXRRXPAXXPXPXPXAXXRGAQP 417
P S PA P P G P
Sbjct: 400 PPPPPSSGNGPAPPPLPPALVPAGGLAP 427
>BC065551-1|AAH65551.1| 440|Homo sapiens WAS/WASL interacting
protein family, member 2 protein.
Length = 440
Score = 31.1 bits (67), Expect = 5.6
Identities = 24/85 (28%), Positives = 28/85 (32%), Gaps = 1/85 (1%)
Frame = -3
Query: 658 PXGPGPGXLXHXKLPPAXXPXXXGPAPPSXRAXXAXXXXPIIEXRXPXXPXPPXPXXXXX 479
P P L + PPA P G APP P+I P PP P
Sbjct: 299 PTSASPSLLSNRPPPPARDPPSRGAAPP--------PPPPVIRNGARDAPPPPPPYRMHG 350
Query: 478 GXRRLXAR-XPRXARXLAGPSPXRP 407
+ P +R AGP P P
Sbjct: 351 SEPPSRGKPPPPPSRTPAGPPPPPP 375
>AJ431177-1|CAD24007.1| 440|Homo sapiens WIRE protein protein.
Length = 440
Score = 31.1 bits (67), Expect = 5.6
Identities = 24/85 (28%), Positives = 28/85 (32%), Gaps = 1/85 (1%)
Frame = -3
Query: 658 PXGPGPGXLXHXKLPPAXXPXXXGPAPPSXRAXXAXXXXPIIEXRXPXXPXPPXPXXXXX 479
P P L + PPA P G APP P+I P PP P
Sbjct: 299 PTSASPSLLSNRPPPPARDPPSRGAAPP--------PPPPVIRNGARDAPPPPPPYRMHG 350
Query: 478 GXRRLXAR-XPRXARXLAGPSPXRP 407
+ P +R AGP P P
Sbjct: 351 SEPPSRGKPPPPPSRTPAGPPPPPP 375
>AB043786-1|BAB85113.1| 440|Homo sapiens WICH protein.
Length = 440
Score = 31.1 bits (67), Expect = 5.6
Identities = 24/85 (28%), Positives = 28/85 (32%), Gaps = 1/85 (1%)
Frame = -3
Query: 658 PXGPGPGXLXHXKLPPAXXPXXXGPAPPSXRAXXAXXXXPIIEXRXPXXPXPPXPXXXXX 479
P P L + PPA P G APP P+I P PP P
Sbjct: 299 PTSASPSLLSNRPPPPARDPPSRGAAPP--------PPPPVIRNGARDAPPPPPPYRMHG 350
Query: 478 GXRRLXAR-XPRXARXLAGPSPXRP 407
+ P +R AGP P P
Sbjct: 351 SEPPSRGKPPPPPSRTPAGPPPPPP 375
>BC077730-1|AAH77730.1| 250|Homo sapiens mannosidase,
endo-alpha-like protein.
Length = 250
Score = 30.7 bits (66), Expect = 7.3
Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Frame = -2
Query: 590 GAGAXLXP--RSPRXAXXPHHRXPTXPXAPXPPXAXASXRRXPAXXPXPXP 444
G G L P R P A P R P P AP PP P P P P
Sbjct: 39 GPGLELAPFERRPEGAPAPAARAPAAPAAP-PPPPPPPRTADPGGSPGPAP 88
>AL929472-6|CAH70081.1| 457|Homo sapiens mannosidase,
endo-alpha-like protein.
Length = 457
Score = 30.7 bits (66), Expect = 7.3
Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Frame = -2
Query: 590 GAGAXLXP--RSPRXAXXPHHRXPTXPXAPXPPXAXASXRRXPAXXPXPXP 444
G G L P R P A P R P P AP PP P P P P
Sbjct: 39 GPGLELAPFERRPEGAPAPAARAPAAPAAP-PPPPPPPRTADPGGSPGPAP 88
>AF499137-1|AAQ07403.1| 903|Homo sapiens synaptopodin protein.
Length = 903
Score = 30.7 bits (66), Expect = 7.3
Identities = 21/54 (38%), Positives = 21/54 (38%)
Frame = -2
Query: 659 PXRPGPRXVXPQXITPRXXAXXPGAGAXLXPRSPRXAXXPHHRXPTXPXAPXPP 498
P P PR PQ P A PGA PRSP A P P P PP
Sbjct: 795 PPPPPPRMRSPQPARP-GSAAVPGAAFAPIPRSPLPAGPSSCTSPRSP-LPAPP 846
>AF499136-1|AAQ07402.1| 903|Homo sapiens synaptopodin protein.
Length = 903
Score = 30.7 bits (66), Expect = 7.3
Identities = 21/54 (38%), Positives = 21/54 (38%)
Frame = -2
Query: 659 PXRPGPRXVXPQXITPRXXAXXPGAGAXLXPRSPRXAXXPHHRXPTXPXAPXPP 498
P P PR PQ P A PGA PRSP A P P P PP
Sbjct: 795 PPPPPPRMRSPQPARP-GSAAVPGAAFAPIPRSPLPAGPSSCTSPRSP-LPAPP 846
>AB028952-1|BAA82981.2| 1015|Homo sapiens KIAA1029 protein protein.
Length = 1015
Score = 30.7 bits (66), Expect = 7.3
Identities = 21/54 (38%), Positives = 21/54 (38%)
Frame = -2
Query: 659 PXRPGPRXVXPQXITPRXXAXXPGAGAXLXPRSPRXAXXPHHRXPTXPXAPXPP 498
P P PR PQ P A PGA PRSP A P P P PP
Sbjct: 907 PPPPPPRMRSPQPARP-GSAAVPGAAFAPIPRSPLPAGPSSCTSPRSP-LPAPP 958
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,140,266
Number of Sequences: 237096
Number of extensions: 977211
Number of successful extensions: 3915
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3653
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11326166088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -