Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_F20
(1081 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 31 1.9
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 29 7.6
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 29 7.6
X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 prot... 29 7.6
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 29 7.6
AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (... 29 7.6
AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical ... 29 7.6
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 29 7.6
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 30.7 bits (66), Expect = 1.9
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +2
Query: 857 LXGXXAPLXFSNXXGGGGGXXXXPPPPP 940
L G F+ GGGGG PPPPP
Sbjct: 9 LFGCSNAFLFNLLGGGGGGCCAPPPPPP 36
Score = 29.5 bits (63), Expect = 4.3
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 939 GGGGGXXXXPPPPPXXXEXXXGA 871
GGGGG PPPPP GA
Sbjct: 23 GGGGGCCAPPPPPPCGGGCGGGA 45
Score = 28.7 bits (61), Expect = 7.6
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 939 GGGGGXXXXPPPPP 898
GGGGG PPPPP
Sbjct: 22 GGGGGGCCAPPPPP 35
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 29.1 bits (62), Expect = 5.7
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -2
Query: 984 FFXFXKXKKKXXXXXGGGGGXXXXPPPPP 898
FF + GGGGG PPPPP
Sbjct: 7 FFAAIAVSQAFLLPSGGGGGCGCAPPPPP 35
Score = 28.7 bits (61), Expect = 7.6
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 899 GGGGGXXXXPPPPP 940
GGGGG PPPPP
Sbjct: 22 GGGGGCGCAPPPPP 35
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 28.7 bits (61), Expect = 7.6
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 939 GGGGGXXXXPPPPP 898
GGGGG PPPPP
Sbjct: 22 GGGGGCGCAPPPPP 35
Score = 28.7 bits (61), Expect = 7.6
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 899 GGGGGXXXXPPPPP 940
GGGGG PPPPP
Sbjct: 22 GGGGGCGCAPPPPP 35
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 28.7 bits (61), Expect = 7.6
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 939 GGGGGXXXXPPPPP 898
GGGGG PPPPP
Sbjct: 32 GGGGGGDAAPPPPP 45
Score = 28.7 bits (61), Expect = 7.6
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 899 GGGGGXXXXPPPPP 940
GGGGG PPPPP
Sbjct: 32 GGGGGGDAAPPPPP 45
Score = 28.7 bits (61), Expect = 7.6
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 939 GGGGGXXXXPPPPP 898
GGGGG PPPPP
Sbjct: 33 GGGGGDAAPPPPPP 46
Score = 28.7 bits (61), Expect = 7.6
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 899 GGGGGXXXXPPPPP 940
GGGGG PPPPP
Sbjct: 33 GGGGGDAAPPPPPP 46
>X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2
protein.
Length = 231
Score = 28.7 bits (61), Expect = 7.6
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 939 GGGGGXXXXPPPPP 898
GGGGG PPPPP
Sbjct: 22 GGGGGCGCAPPPPP 35
Score = 28.7 bits (61), Expect = 7.6
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 899 GGGGGXXXXPPPPP 940
GGGGG PPPPP
Sbjct: 22 GGGGGCGCAPPPPP 35
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 28.7 bits (61), Expect = 7.6
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 939 GGGGGXXXXPPPPP 898
GGGGG PPPPP
Sbjct: 22 GGGGGCGCAPPPPP 35
Score = 28.7 bits (61), Expect = 7.6
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 899 GGGGGXXXXPPPPP 940
GGGGG PPPPP
Sbjct: 22 GGGGGCGCAPPPPP 35
>AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (grd
related) protein19 protein.
Length = 157
Score = 28.7 bits (61), Expect = 7.6
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 939 GGGGGXXXXPPPPP 898
GGGGG PPPPP
Sbjct: 36 GGGGGGCCAPPPPP 49
Score = 28.7 bits (61), Expect = 7.6
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 899 GGGGGXXXXPPPPP 940
GGGGG PPPPP
Sbjct: 36 GGGGGGCCAPPPPP 49
Score = 28.7 bits (61), Expect = 7.6
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 939 GGGGGXXXXPPPPP 898
GGGGG PPPPP
Sbjct: 37 GGGGGCCAPPPPPP 50
Score = 28.7 bits (61), Expect = 7.6
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 899 GGGGGXXXXPPPPP 940
GGGGG PPPPP
Sbjct: 37 GGGGGCCAPPPPPP 50
>AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical
protein C02E7.6 protein.
Length = 70
Score = 28.7 bits (61), Expect = 7.6
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 939 GGGGGXXXXPPPPP 898
GGGGG PPPPP
Sbjct: 22 GGGGGCGCAPPPPP 35
Score = 28.7 bits (61), Expect = 7.6
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 899 GGGGGXXXXPPPPP 940
GGGGG PPPPP
Sbjct: 22 GGGGGCGCAPPPPP 35
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 28.7 bits (61), Expect = 7.6
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 939 GGGGGXXXXPPPPP 898
GGGGG PPPPP
Sbjct: 22 GGGGGCGCAPPPPP 35
Score = 28.7 bits (61), Expect = 7.6
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 899 GGGGGXXXXPPPPP 940
GGGGG PPPPP
Sbjct: 22 GGGGGCGCAPPPPP 35
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,099,677
Number of Sequences: 27780
Number of extensions: 172122
Number of successful extensions: 622
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 472
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2898039926
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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