Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_F04
(789 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 289 2e-78
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 289 2e-78
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 289 2e-78
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 289 2e-78
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 289 2e-78
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 289 2e-78
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 268 4e-72
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 268 4e-72
U13875-9|AAA21160.3| 403|Caenorhabditis elegans Hypothetical pr... 29 5.0
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 289 bits (709), Expect = 2e-78
Identities = 137/207 (66%), Positives = 162/207 (78%)
Frame = -1
Query: 717 KVKWAQRTXGEPIPVDSVFAQDEMMDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVA 538
KV WA+ + + VD+VFAQDEM+D I TSRWHTKKLPRKTHKGLRKVA
Sbjct: 193 KVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVA 252
Query: 537 CIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEK 358
CIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K
Sbjct: 253 CIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQK 309
Query: 357 SITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSS 178
+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSS
Sbjct: 310 TITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSS 369
Query: 177 KFGHGRFQTPADKAAFMGTLKKDRIRE 97
K GHGRFQT A+K AFMG LK+D + E
Sbjct: 370 KTGHGRFQTTAEKRAFMGKLKRDFLAE 396
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 289 bits (709), Expect = 2e-78
Identities = 137/207 (66%), Positives = 162/207 (78%)
Frame = -1
Query: 717 KVKWAQRTXGEPIPVDSVFAQDEMMDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVA 538
KV WA+ + + VD+VFAQDEM+D I TSRWHTKKLPRKTHKGLRKVA
Sbjct: 193 KVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVA 252
Query: 537 CIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEK 358
CIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K
Sbjct: 253 CIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQK 309
Query: 357 SITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSS 178
+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSS
Sbjct: 310 TITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSS 369
Query: 177 KFGHGRFQTPADKAAFMGTLKKDRIRE 97
K GHGRFQT A+K AFMG LK+D + E
Sbjct: 370 KTGHGRFQTTAEKRAFMGKLKRDFLAE 396
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 289 bits (709), Expect = 2e-78
Identities = 137/207 (66%), Positives = 162/207 (78%)
Frame = -1
Query: 717 KVKWAQRTXGEPIPVDSVFAQDEMMDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVA 538
KV WA+ + + VD+VFAQDEM+D I TSRWHTKKLPRKTHKGLRKVA
Sbjct: 95 KVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVA 154
Query: 537 CIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEK 358
CIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K
Sbjct: 155 CIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQK 211
Query: 357 SITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSS 178
+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSS
Sbjct: 212 TITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSS 271
Query: 177 KFGHGRFQTPADKAAFMGTLKKDRIRE 97
K GHGRFQT A+K AFMG LK+D + E
Sbjct: 272 KTGHGRFQTTAEKRAFMGKLKRDFLAE 298
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 289 bits (709), Expect = 2e-78
Identities = 137/207 (66%), Positives = 162/207 (78%)
Frame = -1
Query: 717 KVKWAQRTXGEPIPVDSVFAQDEMMDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVA 538
KV WA+ + + VD+VFAQDEM+D I TSRWHTKKLPRKTHKGLRKVA
Sbjct: 193 KVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVA 252
Query: 537 CIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEK 358
CIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K
Sbjct: 253 CIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQK 309
Query: 357 SITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSS 178
+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSS
Sbjct: 310 TITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSS 369
Query: 177 KFGHGRFQTPADKAAFMGTLKKDRIRE 97
K GHGRFQT A+K AFMG LK+D + E
Sbjct: 370 KTGHGRFQTTAEKRAFMGKLKRDFLAE 396
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 289 bits (709), Expect = 2e-78
Identities = 137/207 (66%), Positives = 162/207 (78%)
Frame = -1
Query: 717 KVKWAQRTXGEPIPVDSVFAQDEMMDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVA 538
KV WA+ + + VD+VFAQDEM+D I TSRWHTKKLPRKTHKGLRKVA
Sbjct: 95 KVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVA 154
Query: 537 CIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEK 358
CIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K
Sbjct: 155 CIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQK 211
Query: 357 SITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSS 178
+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSS
Sbjct: 212 TITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSS 271
Query: 177 KFGHGRFQTPADKAAFMGTLKKDRIRE 97
K GHGRFQT A+K AFMG LK+D + E
Sbjct: 272 KTGHGRFQTTAEKRAFMGKLKRDFLAE 298
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 289 bits (709), Expect = 2e-78
Identities = 137/207 (66%), Positives = 162/207 (78%)
Frame = -1
Query: 717 KVKWAQRTXGEPIPVDSVFAQDEMMDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVA 538
KV WA+ + + VD+VFAQDEM+D I TSRWHTKKLPRKTHKGLRKVA
Sbjct: 193 KVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVA 252
Query: 537 CIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEK 358
CIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K
Sbjct: 253 CIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQK 309
Query: 357 SITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSS 178
+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSS
Sbjct: 310 TITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSS 369
Query: 177 KFGHGRFQTPADKAAFMGTLKKDRIRE 97
K GHGRFQT A+K AFMG LK+D + E
Sbjct: 370 KTGHGRFQTTAEKRAFMGKLKRDFLAE 396
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 268 bits (656), Expect = 4e-72
Identities = 127/190 (66%), Positives = 149/190 (78%)
Frame = -1
Query: 666 VFAQDEMMDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARA 487
V A +M+D I TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARA
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARA 221
Query: 486 GQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNND 307
GQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D
Sbjct: 222 GQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQD 278
Query: 306 FVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFM 127
++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFM
Sbjct: 279 YIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFM 338
Query: 126 GTLKKDRIRE 97
G LK+D + E
Sbjct: 339 GKLKRDFLAE 348
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 268 bits (656), Expect = 4e-72
Identities = 127/190 (66%), Positives = 149/190 (78%)
Frame = -1
Query: 666 VFAQDEMMDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARA 487
V A +M+D I TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARA
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARA 221
Query: 486 GQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNND 307
GQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D
Sbjct: 222 GQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQD 278
Query: 306 FVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFM 127
++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFM
Sbjct: 279 YIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFM 338
Query: 126 GTLKKDRIRE 97
G LK+D + E
Sbjct: 339 GKLKRDFLAE 348
>U13875-9|AAA21160.3| 403|Caenorhabditis elegans Hypothetical
protein C26E6.6 protein.
Length = 403
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = -1
Query: 594 RWHTKKLP-RKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRI 433
RW + P R+T K R++ +G+ +R+ G GY RT +I RI
Sbjct: 241 RWGMRGQPTRRTTKSHRRIGSVGSVGDARIWPGKRMPGHMGYEWRTVSGLEIVRI 295
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,527,477
Number of Sequences: 27780
Number of extensions: 405510
Number of successful extensions: 969
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 961
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -