Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_E21
(794 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC130441-1|AAI30442.1| 585|Homo sapiens piggyBac transposable e... 112 2e-24
AK057200-1|BAB71379.1| 581|Homo sapiens DR1) mRNA. protein. 112 2e-24
D88259-1|BAB46919.1| 809|Homo sapiens cerebral protein-4 protein. 42 0.003
BC128585-1|AAI28586.1| 809|Homo sapiens piggyBac transposable e... 42 0.003
AL021997-3|CAD21704.2| 809|Homo sapiens piggyBac transposable e... 42 0.003
AK223446-1|BAD97166.1| 809|Homo sapiens piggyBac transposable e... 42 0.003
BC069033-1|AAH69033.1| 548|Homo sapiens PGBD1 protein protein. 38 0.042
BC063690-1|AAH63690.1| 593|Homo sapiens piggyBac transposable e... 33 0.90
BC034479-1|AAH34479.1| 1061|Homo sapiens PGBD3 protein protein. 33 0.90
BC028954-1|AAH28954.2| 593|Homo sapiens piggyBac transposable e... 33 0.90
AL138760-1|CAH70290.1| 593|Homo sapiens piggyBac transposable e... 33 0.90
AY367056-1|AAQ72374.1| 520|Homo sapiens KIAA0379-like protein p... 31 4.8
AB002377-1|BAA20833.2| 1059|Homo sapiens KIAA0379 protein protein. 31 4.8
BC063785-1|AAH63785.1| 592|Homo sapiens piggyBac transposable e... 31 6.3
AL672183-3|CAI18712.1| 592|Homo sapiens piggyBac transposable e... 31 6.3
BC036058-1|AAH36058.1| 260|Homo sapiens potassium channel tetra... 30 8.4
AL691479-1|CAI13996.2| 409|Homo sapiens piggyBac transposable e... 30 8.4
>BC130441-1|AAI30442.1| 585|Homo sapiens piggyBac transposable
element derived 4 protein.
Length = 585
Score = 112 bits (269), Expect = 2e-24
Identities = 70/199 (35%), Positives = 108/199 (54%), Gaps = 5/199 (2%)
Frame = -2
Query: 607 RREPFSQISGPKVSFAT---PYDAFVAIWDREIMESIVEETNIYAQQLATVMLETGTIRP 437
+R F+ G KV + P F + E++ I ETN A LA+ G P
Sbjct: 84 QRYDFTGTPGRKVDVSDITDPLQYFELFFTEELVSKITRETNAQAALLASK--PPG---P 138
Query: 436 HGW--ITRWQDTDVNELYTYFAIILAMGVFIKSCLTEYWCTAQDVFYTPGFSAQMSYDRF 263
G+ + +W+DTD +EL +FA++L G+ K L +W T + + TP M+ +RF
Sbjct: 139 KGFSRMDKWKDTDNDELKVFFAVMLLQGIVQKPELEMFWST-RPLLDTPYLRQIMTGERF 197
Query: 262 RLLSRCLHFSNNTACDLAMLTRRQVKLYKIQPLIDHLNKKFAELYNLGQNLAVDESLTMW 83
LL RCLHF NN++ ++ Q+ L KI+P+ D L KF+ +Y +N+AVDESL ++
Sbjct: 198 LLLFRCLHFVNNSSISAGQ-SKAQISLQKIKPVFDFLVNKFSTVYTPNRNIAVDESLMLF 256
Query: 82 KGWLDINQFIPQKAATVGI 26
KG L + Q++P K G+
Sbjct: 257 KGPLAMKQYLPTKRVRFGL 275
>AK057200-1|BAB71379.1| 581|Homo sapiens DR1) mRNA. protein.
Length = 581
Score = 112 bits (269), Expect = 2e-24
Identities = 70/199 (35%), Positives = 108/199 (54%), Gaps = 5/199 (2%)
Frame = -2
Query: 607 RREPFSQISGPKVSFAT---PYDAFVAIWDREIMESIVEETNIYAQQLATVMLETGTIRP 437
+R F+ G KV + P F + E++ I ETN A LA+ G P
Sbjct: 84 QRYDFTGTPGRKVDVSDITDPLQYFELFFTEELVSKITRETNAQAALLASK--PPG---P 138
Query: 436 HGW--ITRWQDTDVNELYTYFAIILAMGVFIKSCLTEYWCTAQDVFYTPGFSAQMSYDRF 263
G+ + +W+DTD +EL +FA++L G+ K L +W T + + TP M+ +RF
Sbjct: 139 KGFSRMDKWKDTDNDELKVFFAVMLLQGIVQKPELEMFWST-RPLLDTPYLRQIMTGERF 197
Query: 262 RLLSRCLHFSNNTACDLAMLTRRQVKLYKIQPLIDHLNKKFAELYNLGQNLAVDESLTMW 83
LL RCLHF NN++ ++ Q+ L KI+P+ D L KF+ +Y +N+AVDESL ++
Sbjct: 198 LLLFRCLHFVNNSSISAGQ-SKAQISLQKIKPVFDFLVNKFSTVYTPNRNIAVDESLMLF 256
Query: 82 KGWLDINQFIPQKAATVGI 26
KG L + Q++P K G+
Sbjct: 257 KGPLAMKQYLPTKRVRFGL 275
>D88259-1|BAB46919.1| 809|Homo sapiens cerebral protein-4 protein.
Length = 809
Score = 41.5 bits (93), Expect = 0.003
Identities = 49/176 (27%), Positives = 72/176 (40%)
Frame = -2
Query: 556 PYDAFVAIWDREIMESIVEETNIYAQQLATVMLETGTIRPHGWITRWQDTDVNELYTYFA 377
P + F +D E IV ETN YA Q V LE V E+ F
Sbjct: 419 PVELFELFFDDETFNLIVNETNNYASQ-KNVSLEV---------------TVQEMRCVFG 462
Query: 376 IILAMGVFIKSCLTEYWCTAQDVFYTPGFSAQMSYDRFRLLSRCLHFSNNTACDLAMLTR 197
++L G F++ E + D A + DRF L+ LHF++N D
Sbjct: 463 VLLLSG-FMRHPRREMYWEVSDTDQNLVRDA-IRRDRFELIFSNLHFADNGHLD------ 514
Query: 196 RQVKLYKIQPLIDHLNKKFAELYNLGQNLAVDESLTMWKGWLDINQFIPQKAATVG 29
++ K K++PLI +NK F L + D+S+ D +QF+ K +G
Sbjct: 515 QKDKFTKLRPLIKQMNKNFLLYAPLEEYYCFDKSMC---ECFDSDQFLNGKPIRIG 567
>BC128585-1|AAI28586.1| 809|Homo sapiens piggyBac transposable
element derived 1 protein.
Length = 809
Score = 41.5 bits (93), Expect = 0.003
Identities = 49/176 (27%), Positives = 72/176 (40%)
Frame = -2
Query: 556 PYDAFVAIWDREIMESIVEETNIYAQQLATVMLETGTIRPHGWITRWQDTDVNELYTYFA 377
P + F +D E IV ETN YA Q V LE V E+ F
Sbjct: 419 PVELFELFFDDETFNLIVNETNNYASQ-KNVSLEV---------------TVQEMRCVFG 462
Query: 376 IILAMGVFIKSCLTEYWCTAQDVFYTPGFSAQMSYDRFRLLSRCLHFSNNTACDLAMLTR 197
++L G F++ E + D A + DRF L+ LHF++N D
Sbjct: 463 VLLLSG-FMRHPRREMYWEVSDTDQNLVRDA-IRRDRFELIFSNLHFADNGHLD------ 514
Query: 196 RQVKLYKIQPLIDHLNKKFAELYNLGQNLAVDESLTMWKGWLDINQFIPQKAATVG 29
++ K K++PLI +NK F L + D+S+ D +QF+ K +G
Sbjct: 515 QKDKFTKLRPLIKQMNKNFLLYAPLEEYYCFDKSMC---ECFDSDQFLNGKPIRIG 567
>AL021997-3|CAD21704.2| 809|Homo sapiens piggyBac transposable
element derived 1 protein.
Length = 809
Score = 41.5 bits (93), Expect = 0.003
Identities = 49/176 (27%), Positives = 72/176 (40%)
Frame = -2
Query: 556 PYDAFVAIWDREIMESIVEETNIYAQQLATVMLETGTIRPHGWITRWQDTDVNELYTYFA 377
P + F +D E IV ETN YA Q V LE V E+ F
Sbjct: 419 PVELFELFFDDETFNLIVNETNNYASQ-KNVSLEV---------------TVQEMRCVFG 462
Query: 376 IILAMGVFIKSCLTEYWCTAQDVFYTPGFSAQMSYDRFRLLSRCLHFSNNTACDLAMLTR 197
++L G F++ E + D A + DRF L+ LHF++N D
Sbjct: 463 VLLLSG-FMRHPRREMYWEVSDTDQNLVRDA-IRRDRFELIFSNLHFADNGHLD------ 514
Query: 196 RQVKLYKIQPLIDHLNKKFAELYNLGQNLAVDESLTMWKGWLDINQFIPQKAATVG 29
++ K K++PLI +NK F L + D+S+ D +QF+ K +G
Sbjct: 515 QKDKFTKLRPLIKQMNKNFLLYAPLEEYYCFDKSMC---ECFDSDQFLNGKPIRIG 567
>AK223446-1|BAD97166.1| 809|Homo sapiens piggyBac transposable
element derived 1 variant protein.
Length = 809
Score = 41.5 bits (93), Expect = 0.003
Identities = 49/176 (27%), Positives = 72/176 (40%)
Frame = -2
Query: 556 PYDAFVAIWDREIMESIVEETNIYAQQLATVMLETGTIRPHGWITRWQDTDVNELYTYFA 377
P + F +D E IV ETN YA Q V LE V E+ F
Sbjct: 419 PVELFELFFDDETFNLIVNETNNYASQ-KNVSLEV---------------TVQEMRCVFG 462
Query: 376 IILAMGVFIKSCLTEYWCTAQDVFYTPGFSAQMSYDRFRLLSRCLHFSNNTACDLAMLTR 197
++L G F++ E + D A + DRF L+ LHF++N D
Sbjct: 463 VLLLSG-FMRHPRREMYWEVSDTDQNLVRDA-VRRDRFELIFSNLHFADNGHLD------ 514
Query: 196 RQVKLYKIQPLIDHLNKKFAELYNLGQNLAVDESLTMWKGWLDINQFIPQKAATVG 29
++ K K++PLI +NK F L + D+S+ D +QF+ K +G
Sbjct: 515 QKDKFTKLRPLIKQMNKNFLLYAPLEEYYCFDKSMC---ECFDSDQFLNGKPIRIG 567
>BC069033-1|AAH69033.1| 548|Homo sapiens PGBD1 protein protein.
Length = 548
Score = 37.9 bits (84), Expect = 0.042
Identities = 41/139 (29%), Positives = 58/139 (41%)
Frame = -2
Query: 556 PYDAFVAIWDREIMESIVEETNIYAQQLATVMLETGTIRPHGWITRWQDTDVNELYTYFA 377
P + F +D E IV ETN YA Q V LE V E+ F
Sbjct: 419 PVELFELFFDDETFNLIVNETNNYASQ-KNVSLEV---------------TVQEMRCVFG 462
Query: 376 IILAMGVFIKSCLTEYWCTAQDVFYTPGFSAQMSYDRFRLLSRCLHFSNNTACDLAMLTR 197
++L G F++ E + D A + DRF L+ LHF++N D
Sbjct: 463 VLLLSG-FMRHPRREMYWEVSDTDQNLVRDA-IRRDRFELIFSNLHFADNGHLD------ 514
Query: 196 RQVKLYKIQPLIDHLNKKF 140
++ K K++PLI +NK F
Sbjct: 515 QKDKFTKLRPLIKQMNKNF 533
>BC063690-1|AAH63690.1| 593|Homo sapiens piggyBac transposable
element derived 3 protein.
Length = 593
Score = 33.5 bits (73), Expect = 0.90
Identities = 52/219 (23%), Positives = 82/219 (37%), Gaps = 4/219 (1%)
Frame = -2
Query: 673 RPTNKFMFEWRTAPMPAIEPDLRREPFSQISGPKVSF----ATPYDAFVAIWDREIMESI 506
R K + +W+ A + ++P R ++ P F TP + D E++E I
Sbjct: 105 RKMTKILCKWKKADL-TVQPVAGR-----VTAPPNDFFTVMRTPTEILELFLDDEVIELI 158
Query: 505 VEETNIYAQQLATVMLETGTIRPHGWITRWQDTDVNELYTYFAIILAMGVFIKSCLTEYW 326
V+ +N+YA H +T +E + II G +W
Sbjct: 159 VKYSNLYACSKGV----------HLGLTS------SEFKCFLGIIFLSGYVSVPRRRMFW 202
Query: 325 CTAQDVFYTPGFSAQMSYDRFRLLSRCLHFSNNTACDLAMLTRRQVKLYKIQPLIDHLNK 146
DV + SA M DRF + LH ++N D K K++PLI LN+
Sbjct: 203 EQRTDV-HNVLVSAAMRRDRFETIFSNLHVADNANLDPVD------KFSKLRPLISKLNE 255
Query: 145 KFAELYNLGQNLAVDESLTMWKGWLDINQFIPQKAATVG 29
+ + + DE + + G QFI K G
Sbjct: 256 RCMKFVPNETYFSFDEFMVPYFGRHGCKQFIRGKPIRFG 294
>BC034479-1|AAH34479.1| 1061|Homo sapiens PGBD3 protein protein.
Length = 1061
Score = 33.5 bits (73), Expect = 0.90
Identities = 52/219 (23%), Positives = 82/219 (37%), Gaps = 4/219 (1%)
Frame = -2
Query: 673 RPTNKFMFEWRTAPMPAIEPDLRREPFSQISGPKVSF----ATPYDAFVAIWDREIMESI 506
R K + +W+ A + ++P R ++ P F TP + D E++E I
Sbjct: 573 RKMTKILCKWKKADL-TVQPVAGR-----VTAPPNDFFTVMRTPTEILELFLDDEVIELI 626
Query: 505 VEETNIYAQQLATVMLETGTIRPHGWITRWQDTDVNELYTYFAIILAMGVFIKSCLTEYW 326
V+ +N+YA H +T +E + II G +W
Sbjct: 627 VKYSNLYACSKGV----------HLGLTS------SEFKCFLGIIFLSGYVSVPRRRMFW 670
Query: 325 CTAQDVFYTPGFSAQMSYDRFRLLSRCLHFSNNTACDLAMLTRRQVKLYKIQPLIDHLNK 146
DV + SA M DRF + LH ++N D K K++PLI LN+
Sbjct: 671 EQRTDV-HNVLVSAAMRRDRFETIFSNLHVADNANLDPVD------KFSKLRPLISKLNE 723
Query: 145 KFAELYNLGQNLAVDESLTMWKGWLDINQFIPQKAATVG 29
+ + + DE + + G QFI K G
Sbjct: 724 RCMKFVPNETYFSFDEFMVPYFGRHGCKQFIRGKPIRFG 762
>BC028954-1|AAH28954.2| 593|Homo sapiens piggyBac transposable
element derived 3 protein.
Length = 593
Score = 33.5 bits (73), Expect = 0.90
Identities = 52/219 (23%), Positives = 82/219 (37%), Gaps = 4/219 (1%)
Frame = -2
Query: 673 RPTNKFMFEWRTAPMPAIEPDLRREPFSQISGPKVSF----ATPYDAFVAIWDREIMESI 506
R K + +W+ A + ++P R ++ P F TP + D E++E I
Sbjct: 105 RKMTKILCKWKKADL-TVQPVAGR-----VTAPPNDFFTVMRTPTEILELFLDDEVIELI 158
Query: 505 VEETNIYAQQLATVMLETGTIRPHGWITRWQDTDVNELYTYFAIILAMGVFIKSCLTEYW 326
V+ +N+YA H +T +E + II G +W
Sbjct: 159 VKYSNLYACSKGV----------HLGLTS------SEFKCFLGIIFLSGYVSVPRRRMFW 202
Query: 325 CTAQDVFYTPGFSAQMSYDRFRLLSRCLHFSNNTACDLAMLTRRQVKLYKIQPLIDHLNK 146
DV + SA M DRF + LH ++N D K K++PLI LN+
Sbjct: 203 EQRTDV-HNVLVSAAMRRDRFETIFSNLHVADNANLDPVD------KFSKLRPLISKLNE 255
Query: 145 KFAELYNLGQNLAVDESLTMWKGWLDINQFIPQKAATVG 29
+ + + DE + + G QFI K G
Sbjct: 256 RCMKFVPNETYFSFDEFMVPYFGRHGCKQFIRGKPIRFG 294
>AL138760-1|CAH70290.1| 593|Homo sapiens piggyBac transposable
element derived 3 protein.
Length = 593
Score = 33.5 bits (73), Expect = 0.90
Identities = 52/219 (23%), Positives = 82/219 (37%), Gaps = 4/219 (1%)
Frame = -2
Query: 673 RPTNKFMFEWRTAPMPAIEPDLRREPFSQISGPKVSF----ATPYDAFVAIWDREIMESI 506
R K + +W+ A + ++P R ++ P F TP + D E++E I
Sbjct: 105 RKMTKILCKWKKADL-TVQPVAGR-----VTAPPNDFFTVMRTPTEILELFLDDEVIELI 158
Query: 505 VEETNIYAQQLATVMLETGTIRPHGWITRWQDTDVNELYTYFAIILAMGVFIKSCLTEYW 326
V+ +N+YA H +T +E + II G +W
Sbjct: 159 VKYSNLYACSKGV----------HLGLTS------SEFKCFLGIIFLSGYVSVPRRRMFW 202
Query: 325 CTAQDVFYTPGFSAQMSYDRFRLLSRCLHFSNNTACDLAMLTRRQVKLYKIQPLIDHLNK 146
DV + SA M DRF + LH ++N D K K++PLI LN+
Sbjct: 203 EQRTDV-HNVLVSAAMRRDRFETIFSNLHVADNANLDPVD------KFSKLRPLISKLNE 255
Query: 145 KFAELYNLGQNLAVDESLTMWKGWLDINQFIPQKAATVG 29
+ + + DE + + G QFI K G
Sbjct: 256 RCMKFVPNETYFSFDEFMVPYFGRHGCKQFIRGKPIRFG 294
>AY367056-1|AAQ72374.1| 520|Homo sapiens KIAA0379-like protein
protein.
Length = 520
Score = 31.1 bits (67), Expect = 4.8
Identities = 36/123 (29%), Positives = 52/123 (42%), Gaps = 7/123 (5%)
Frame = -1
Query: 638 GANACNRT*FKARTVLPN*WSKGFFRDSV*CIRCHMG--S*NNGIDSRGNQHLRTAAGNG 465
GA+ N T K RT L F D V C++ + + N +DS G L AA NG
Sbjct: 279 GASIVNATDSKGRTPL----HAAAFTDHVECLQLLLSHNAQVNSVDSTGKTPLMMAAENG 334
Query: 464 HAGDWDDPPSWLDYSMA-RYGCKRT-LHVFC---HHSGYGGVHQKLPDRVLVHGTRRILY 300
+ S + + K T LH+ C H + + +K+ DR L++ T L
Sbjct: 335 QTNTVEMLVSSASAELTLQDNSKNTALHLACSKGHETSALLILEKITDRNLINATNAALQ 394
Query: 299 TRL 291
T L
Sbjct: 395 TPL 397
>AB002377-1|BAA20833.2| 1059|Homo sapiens KIAA0379 protein protein.
Length = 1059
Score = 31.1 bits (67), Expect = 4.8
Identities = 36/123 (29%), Positives = 52/123 (42%), Gaps = 7/123 (5%)
Frame = -1
Query: 638 GANACNRT*FKARTVLPN*WSKGFFRDSV*CIRCHMG--S*NNGIDSRGNQHLRTAAGNG 465
GA+ N T K RT L F D V C++ + + N +DS G L AA NG
Sbjct: 818 GASIVNATDSKGRTPL----HAAAFTDHVECLQLLLSHNAQVNSVDSTGKTPLMMAAENG 873
Query: 464 HAGDWDDPPSWLDYSMA-RYGCKRT-LHVFC---HHSGYGGVHQKLPDRVLVHGTRRILY 300
+ S + + K T LH+ C H + + +K+ DR L++ T L
Sbjct: 874 QTNTVEMLVSSASAELTLQDNSKNTALHLACSKGHETSALLILEKITDRNLINATNAALQ 933
Query: 299 TRL 291
T L
Sbjct: 934 TPL 936
>BC063785-1|AAH63785.1| 592|Homo sapiens piggyBac transposable
element derived 2 protein.
Length = 592
Score = 30.7 bits (66), Expect = 6.3
Identities = 30/123 (24%), Positives = 50/123 (40%)
Frame = -2
Query: 397 ELYTYFAIILAMGVFIKSCLTEYWCTAQDVFYTPGFSAQMSYDRFRLLSRCLHFSNNTAC 218
EL I++ G +W T+ D + A + DRF L+ LHF++N
Sbjct: 178 ELKCVLGILILSGYISYPRRRMFWETSPDSHHHLVADA-IRRDRFELIFSYLHFADNNEL 236
Query: 217 DLAMLTRRQVKLYKIQPLIDHLNKKFAELYNLGQNLAVDESLTMWKGWLDINQFIPQKAA 38
D + + K++PLI +N F + L + + ES+ + G Q K
Sbjct: 237 DAS------DRFAKVRPLIIRMNCNFQKHAPLEEFYSFGESMCEYFGHRGSKQLHRGKPV 290
Query: 37 TVG 29
+G
Sbjct: 291 RLG 293
>AL672183-3|CAI18712.1| 592|Homo sapiens piggyBac transposable
element derived 2 protein.
Length = 592
Score = 30.7 bits (66), Expect = 6.3
Identities = 30/123 (24%), Positives = 50/123 (40%)
Frame = -2
Query: 397 ELYTYFAIILAMGVFIKSCLTEYWCTAQDVFYTPGFSAQMSYDRFRLLSRCLHFSNNTAC 218
EL I++ G +W T+ D + A + DRF L+ LHF++N
Sbjct: 178 ELKCVLGILILSGYISYPRRRMFWETSPDSHHHLVADA-IRRDRFELIFSYLHFADNNEL 236
Query: 217 DLAMLTRRQVKLYKIQPLIDHLNKKFAELYNLGQNLAVDESLTMWKGWLDINQFIPQKAA 38
D + + K++PLI +N F + L + + ES+ + G Q K
Sbjct: 237 DAS------DRFAKVRPLIIRMNCNFQKHAPLEEFYSFGESMCEYFGHRGSKQLHRGKPV 290
Query: 37 TVG 29
+G
Sbjct: 291 RLG 293
>BC036058-1|AAH36058.1| 260|Homo sapiens potassium channel
tetramerisation domain containing 21 protein.
Length = 260
Score = 30.3 bits (65), Expect = 8.4
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = -2
Query: 205 LTRRQVKLYKIQPLIDHLNKKFAELYNLGQNLAVDESL 92
L RR+ Y++QPLI+ L +K EL +N ++ +L
Sbjct: 79 LLRREADFYQVQPLIEALQEKEVELSKAEKNAMLNITL 116
>AL691479-1|CAI13996.2| 409|Homo sapiens piggyBac transposable
element derived 5 protein.
Length = 409
Score = 30.3 bits (65), Expect = 8.4
Identities = 32/158 (20%), Positives = 60/158 (37%), Gaps = 1/158 (0%)
Frame = -2
Query: 562 ATPYDAFVAIWDREIMESIVEETNIYAQQLATVMLETGTIRPHGWITRWQDTDVNELYTY 383
A+ D F +++++V +TN+YA++ G W + + E+ +
Sbjct: 5 ASAVDFFQLFVPDNVLKNMVVQTNMYAKKFQERFGSDGA---------WVEVTLTEMKAF 55
Query: 382 FAIILAMGVFIKSCLTEYWCTAQDVFYTP-GFSAQMSYDRFRLLSRCLHFSNNTACDLAM 206
+++ + + W FY+ + MS RF + + H A +
Sbjct: 56 LGYMISTSISHCESVLSIWSGG---FYSNRSLALVMSQARFEKILKYFHV---VAFRSSQ 109
Query: 205 LTRRQVKLYKIQPLIDHLNKKFAELYNLGQNLAVDESL 92
T LYK+QP +D L F + Q + E L
Sbjct: 110 TTHG---LYKVQPFLDSLQNSFDSAFRPSQTQVLHEPL 144
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,107,970
Number of Sequences: 237096
Number of extensions: 2378230
Number of successful extensions: 5159
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5149
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9757565650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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