Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_T7_E21
         (794 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          25   0.81 
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      25   0.81 
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    24   1.9  
AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    22   5.7  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   5.7  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    21   10.0 
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   10.0 
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    21   10.0 
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    21   10.0 
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    21   10.0 

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 25.0 bits (52), Expect = 0.81
 Identities = 12/62 (19%), Positives = 32/62 (51%)
 Frame = -2

Query: 238 FSNNTACDLAMLTRRQVKLYKIQPLIDHLNKKFAELYNLGQNLAVDESLTMWKGWLDINQ 59
           ++     D+  L  +Q K++ +   +   +   AE Y++G+N  ++ ++ M+K    + +
Sbjct: 22  YAGRHTADMDFL-HKQKKIFDLLLYVRQADLSDAEWYDVGRNYDMESNMDMYKDKNVVQK 80

Query: 58  FI 53
           F+
Sbjct: 81  FL 82


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 25.0 bits (52), Expect = 0.81
 Identities = 12/62 (19%), Positives = 32/62 (51%)
 Frame = -2

Query: 238 FSNNTACDLAMLTRRQVKLYKIQPLIDHLNKKFAELYNLGQNLAVDESLTMWKGWLDINQ 59
           ++     D+  L  +Q K++ +   +   +   AE Y++G+N  ++ ++ M+K    + +
Sbjct: 22  YAGRHTADMDFL-HKQKKIFDLLLYVRQADLSDAEWYDVGRNYDMESNMDMYKDKNVVQK 80

Query: 58  FI 53
           F+
Sbjct: 81  FL 82


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +2

Query: 275 RHLGGEAWCIKYVLCRAPILGQAAFDEHP 361
           R L    W + +V+C  P++G      HP
Sbjct: 183 RLLVATVWILSFVICFPPLVGWKDKRSHP 211


>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 280 FGRRSLVYKIRLVPCTNTRSGS 345
           F RRS+  KI+  PCT  +  S
Sbjct: 41  FFRRSIQQKIQYRPCTKNQQCS 62


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 280 FGRRSLVYKIRLVPCTNTRSGS 345
           F RRS+  KI+  PCT  +  S
Sbjct: 90  FFRRSIQQKIQYRPCTKNQQCS 111


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -2

Query: 340 LTEYWCTAQDVFYTPGFSAQMSYDRF 263
           L E W  + ++FYT   ++Q  Y  F
Sbjct: 192 LVEKWVNSSEIFYT---TSQQYYGHF 214


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 10/18 (55%), Positives = 11/18 (61%), Gaps = 1/18 (5%)
 Frame = +2

Query: 533 YGN-ECIIRSRERNLWTT 583
           YG   C+I SR RNL  T
Sbjct: 218 YGRISCVIASRHRNLEAT 235


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 6   FFFF*VLIPTVAAFCGMNWFISS 74
           FFF  +LI   + FC +  FI++
Sbjct: 380 FFFMLILIGLDSQFCTVEGFITA 402


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 6   FFFF*VLIPTVAAFCGMNWFISS 74
           FFF  +LI   + FC +  FI++
Sbjct: 433 FFFMLILIGLDSQFCTVEGFITA 455


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 269 VIRHLGGEAWCIK 307
           VI  LGGE  C+K
Sbjct: 275 VIEELGGEIQCVK 287


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,111
Number of Sequences: 438
Number of extensions: 4831
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25125039
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)