Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_E12
(826 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 32 0.43
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 31 1.0
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 31 1.0
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 31 1.0
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 31 1.3
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 30 1.7
AF100656-3|AAF99968.1| 265|Caenorhabditis elegans Hypothetical ... 29 5.3
Z70213-6|CAA94176.1| 167|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical p... 28 7.1
U97592-5|AAB52873.1| 597|Caenorhabditis elegans Hypothetical pr... 28 7.1
U41032-4|AAO44918.2| 1130|Caenorhabditis elegans Protein kinase ... 28 7.1
U41032-3|AAO44917.1| 1237|Caenorhabditis elegans Protein kinase ... 28 7.1
U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical pr... 28 7.1
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl... 28 9.3
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl... 28 9.3
AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical... 28 9.3
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical... 28 9.3
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 32.3 bits (70), Expect = 0.43
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = -3
Query: 707 PSPAISXTSTRSSNPXFHTPTTPDLTSISINPLTP--Y*KEFAPGLKPPLSSEAPSAYLT 534
P+P + T+T +NP TPTT + +I +P P + P S+ AP+A +
Sbjct: 490 PTPVPTTTNTPPANPTTATPTT--VGTIGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVN 547
Query: 533 PSSLGMAKGVSP 498
P+S A V P
Sbjct: 548 PTSPTTAPTVPP 559
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/51 (37%), Positives = 21/51 (41%)
Frame = -1
Query: 763 PPLNLXALXLXFRPYASSHPPLRFRXHQPDHQIPDSIHQPPQT*HPFPSIP 611
PP A RP +S PP+R PD P Q P HP PS P
Sbjct: 321 PPATTRAPPATTRPAPASQPPVR-EPETPDSGYPSPAPQEPA--HPSPSYP 368
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 31.1 bits (67), Expect = 1.0
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = -3
Query: 710 PPSPAISXTS-TRSSNPXFHTPTTPDL--TSISINPLTPY*KEFAPGLKPPLSSEAPSAY 540
P SP+ S TS + S ++PT+P TS S +P +P +P P S +PS+
Sbjct: 1607 PVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSP 1666
Query: 539 LTPSSLGMAKGVSPPY 492
S SP Y
Sbjct: 1667 SYSPSSPRYSPTSPTY 1682
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 31.1 bits (67), Expect = 1.0
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = -3
Query: 710 PPSPAISXTS-TRSSNPXFHTPTTPDL--TSISINPLTPY*KEFAPGLKPPLSSEAPSAY 540
P SP+ S TS + S ++PT+P TS S +P +P +P P S +PS+
Sbjct: 1614 PVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSP 1673
Query: 539 LTPSSLGMAKGVSPPY 492
S SP Y
Sbjct: 1674 SYSPSSPRYSPTSPTY 1689
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/71 (26%), Positives = 31/71 (43%)
Frame = -3
Query: 707 PSPAISXTSTRSSNPXFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPS 528
P+P + T+T +NP TPTT TS N ++P+ + + AP +P+
Sbjct: 490 PTPVPTTTNTPPANPTTATPTTVG-TSKQTNTISPHLSTITGSIVTSTPTMAPQTSASPT 548
Query: 527 SLGMAKGVSPP 495
+ S P
Sbjct: 549 TTPTHTTASQP 559
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 30.3 bits (65), Expect = 1.7
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 1/94 (1%)
Frame = -3
Query: 710 PPSPAISXTSTRSSNPXFHTPTTPDLTSISINPLTPY*KEFAP-GLKPPLSSEAPSAYLT 534
P S I+ TS+ S+ P + T T + + E ++ SS +PS + T
Sbjct: 695 PDSTIITSTSSTSTRPGTSSTATDSPTMDDTSKTSTVTSEGTTLSIESTESSASPSDFTT 754
Query: 533 PSSLGMAKGVSPPYFQVNDESQASHLISRHSTHT 432
P +G VS Q + S +S + T T
Sbjct: 755 PDFIGFTSSVSRTSEQYSSSSPSSDTTTMDVTST 788
>AF100656-3|AAF99968.1| 265|Caenorhabditis elegans Hypothetical
protein F49F1.1 protein.
Length = 265
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/54 (24%), Positives = 28/54 (51%)
Frame = -3
Query: 707 PSPAISXTSTRSSNPXFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPS 546
P+ S ++ + P T TP+LT++++ P+T K + P +++ P+
Sbjct: 160 PATCGSCSNGTTGVPLVLTTLTPELTTVTVEPITSTLKPTTTTITPTTTTKLPT 213
>Z70213-6|CAA94176.1| 167|Caenorhabditis elegans Hypothetical
protein ZK930.7 protein.
Length = 167
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -3
Query: 713 KPPSPAISXTSTRSSNPXFHTPTTPDLTSISINPLT 606
KPP+P+ T N + P++P T S PLT
Sbjct: 101 KPPAPSARTPPTIYENLAINAPSSPSATDASSVPLT 136
>Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical
protein T20D3.11 protein.
Length = 1843
Score = 28.3 bits (60), Expect = 7.1
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -1
Query: 724 PYASSHPPLRFRXHQPDHQIPDS 656
P +S HPPL H +H PD+
Sbjct: 66 PTSSHHPPLNSSSHHSNHNYPDT 88
>U97592-5|AAB52873.1| 597|Caenorhabditis elegans Hypothetical
protein C14A11.6 protein.
Length = 597
Score = 28.3 bits (60), Expect = 7.1
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = -3
Query: 695 ISXTSTRSSNPXFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGM 516
+S +STR+++ + +TP T+ +I P P E + +K + E A P+ M
Sbjct: 528 LSHSSTRTADTIAASTSTPPSTTSNITPSRPTTSEQSNTIKRKTAFEKEDA--PPAKRSM 585
Query: 515 AKGVSPPYF 489
A YF
Sbjct: 586 ATSTDDAYF 594
>U41032-4|AAO44918.2| 1130|Caenorhabditis elegans Protein kinase
protein 25, isoformb protein.
Length = 1130
Score = 28.3 bits (60), Expect = 7.1
Identities = 25/107 (23%), Positives = 46/107 (42%), Gaps = 5/107 (4%)
Frame = -3
Query: 776 SQXVATP*SFXIXIXVSPLCIKPPSPAISXTSTRSSNPXFHT----PTT-PDLTSISINP 612
S V+T S +P+ +P P ++ +SS P + PT P T+ P
Sbjct: 841 SAAVSTASSVPSTARDNPVETRPSQPHVTMPPKKSSEPILSSEVLQPTRLPSATTSQAKP 900
Query: 611 LTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMAKGVSPPYFQVNDES 471
+T + P PP+++ P+A + + +G + P F + + S
Sbjct: 901 VTQPIRH--PS--PPVATVIPTAVVDKKPVSQNQGSNVPLFNITNSS 943
>U41032-3|AAO44917.1| 1237|Caenorhabditis elegans Protein kinase
protein 25, isoforma protein.
Length = 1237
Score = 28.3 bits (60), Expect = 7.1
Identities = 25/107 (23%), Positives = 46/107 (42%), Gaps = 5/107 (4%)
Frame = -3
Query: 776 SQXVATP*SFXIXIXVSPLCIKPPSPAISXTSTRSSNPXFHT----PTT-PDLTSISINP 612
S V+T S +P+ +P P ++ +SS P + PT P T+ P
Sbjct: 948 SAAVSTASSVPSTARDNPVETRPSQPHVTMPPKKSSEPILSSEVLQPTRLPSATTSQAKP 1007
Query: 611 LTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMAKGVSPPYFQVNDES 471
+T + P PP+++ P+A + + +G + P F + + S
Sbjct: 1008 VTQPIRH--PS--PPVATVIPTAVVDKKPVSQNQGSNVPLFNITNSS 1050
>U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical protein
F40H6.5 protein.
Length = 1288
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = -3
Query: 731 VSPLCIKPPSPAISXTSTRSSNPXFHTPTTPDLTSISINPLT 606
VS C++PP+ + TST T TTP LT+ S P T
Sbjct: 1145 VSMACVRPPTTPTTTTSTT-------TTTTPKLTTTSTLPST 1179
>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform b protein.
Length = 1590
Score = 27.9 bits (59), Expect = 9.3
Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Frame = -3
Query: 731 VSPLCIKPPSPAISXTSTRSSNPXFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEA 552
VSPL PP PA + + P T +I I + + + +P PP SS +
Sbjct: 311 VSPLPPPPPEPAPAREKVENGGPTTFKMTFKKAANIPILKTSAFEQPSSP---PPSSSVS 367
Query: 551 PSAYLTP--SSLGMAKGVSPPYFQVNDESQASH 459
S L+ SS +A SP N + AS+
Sbjct: 368 SSISLSEVNSSTSIASESSPAKRSSNFDLTASN 400
>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform a protein.
Length = 1604
Score = 27.9 bits (59), Expect = 9.3
Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Frame = -3
Query: 731 VSPLCIKPPSPAISXTSTRSSNPXFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEA 552
VSPL PP PA + + P T +I I + + + +P PP SS +
Sbjct: 325 VSPLPPPPPEPAPAREKVENGGPTTFKMTFKKAANIPILKTSAFEQPSSP---PPSSSVS 381
Query: 551 PSAYLTP--SSLGMAKGVSPPYFQVNDESQASH 459
S L+ SS +A SP N + AS+
Sbjct: 382 SSISLSEVNSSTSIASESSPAKRSSNFDLTASN 414
>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
protein Y57A10A.18b protein.
Length = 1459
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -3
Query: 569 PLSSEAPSAYLTPSSLGMAKGVSPP 495
P+++EAP+A PS + +G SPP
Sbjct: 1203 PVAAEAPAAAAAPSRARVPRGPSPP 1227
>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
protein Y57A10A.18a protein.
Length = 1456
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -3
Query: 569 PLSSEAPSAYLTPSSLGMAKGVSPP 495
P+++EAP+A PS + +G SPP
Sbjct: 1203 PVAAEAPAAAAAPSRARVPRGPSPP 1227
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,250,000
Number of Sequences: 27780
Number of extensions: 359497
Number of successful extensions: 1188
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1184
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2040452812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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