Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_T7_E07
         (802 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z37983-1|CAA86061.1|  276|Caenorhabditis elegans Hypothetical pr...    81   1e-15
Z31590-9|CAA83467.2|  581|Caenorhabditis elegans Hypothetical pr...    33   0.31 
AL032660-3|CAA21753.2|  581|Caenorhabditis elegans Hypothetical ...    33   0.31 
AF039043-7|AAY86190.1|  103|Caenorhabditis elegans Hypothetical ...    29   2.9  
Z48006-3|CAB62803.1|  449|Caenorhabditis elegans Hypothetical pr...    28   8.9  
Z48006-2|CAA88050.1|  495|Caenorhabditis elegans Hypothetical pr...    28   8.9  
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ...    28   8.9  
AL033510-7|CAA22069.1|  124|Caenorhabditis elegans Hypothetical ...    28   8.9  
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.    28   8.9  

>Z37983-1|CAA86061.1|  276|Caenorhabditis elegans Hypothetical
           protein B0393.1 protein.
          Length = 276

 Score = 80.6 bits (190), Expect = 1e-15
 Identities = 40/79 (50%), Positives = 52/79 (65%), Gaps = 5/79 (6%)
 Frame = -2

Query: 576 TEASYVNIPVXALCNTDSPTKDLWTLLSPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQ 397
           TEASYV +PV +  NT+SP K L  +  PCN K   SIGLMWW+LARE+L LRG + R  
Sbjct: 135 TEASYVGVPVISFVNTESPLK-LIDIGVPCNNKGERSIGLMWWMLAREILILRGKISRQT 193

Query: 396 RW-----DVVVDLFFYRXP 355
            +     +++ DL+FYR P
Sbjct: 194 GFVLEGKEIMPDLYFYRDP 212


>Z31590-9|CAA83467.2|  581|Caenorhabditis elegans Hypothetical
           protein R01H10.1 protein.
          Length = 581

 Score = 32.7 bits (71), Expect = 0.31
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = -2

Query: 672 PGXFYKPNPKLHSVKXXFLXVLDPCTXTINPFTEASYVNIPVXALCNTD 526
           P   ++ N KL  +K   + V DPC   I+    A   + P+ AL NT+
Sbjct: 418 PSAPFQQNRKLDKIKKELIFVADPCIFRISGVEVAMTSSEPIQALSNTE 466


>AL032660-3|CAA21753.2|  581|Caenorhabditis elegans Hypothetical
           protein R01H10.1 protein.
          Length = 581

 Score = 32.7 bits (71), Expect = 0.31
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = -2

Query: 672 PGXFYKPNPKLHSVKXXFLXVLDPCTXTINPFTEASYVNIPVXALCNTD 526
           P   ++ N KL  +K   + V DPC   I+    A   + P+ AL NT+
Sbjct: 418 PSAPFQQNRKLDKIKKELIFVADPCIFRISGVEVAMTSSEPIQALSNTE 466


>AF039043-7|AAY86190.1|  103|Caenorhabditis elegans Hypothetical
           protein F39C12.4 protein.
          Length = 103

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = -2

Query: 213 CCTRCSSCFWSTPCSRRMVCP 151
           CCT    CF ST CS   VCP
Sbjct: 53  CCTN-EECFMSTECSYSAVCP 72


>Z48006-3|CAB62803.1|  449|Caenorhabditis elegans Hypothetical
           protein F19C6.2b protein.
          Length = 449

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -2

Query: 579 FTEASYVNIPVXALCNTDSPTKDLWTLLSPCNTKSSHSIGLMW 451
           FT   Y  IP+      DSP  D+W +++     S+   GL++
Sbjct: 40  FTSKGYSGIPLLGELPIDSPLDDIWKVVAVLFKISAREEGLIF 82


>Z48006-2|CAA88050.1|  495|Caenorhabditis elegans Hypothetical
           protein F19C6.2a protein.
          Length = 495

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -2

Query: 579 FTEASYVNIPVXALCNTDSPTKDLWTLLSPCNTKSSHSIGLMW 451
           FT   Y  IP+      DSP  D+W +++     S+   GL++
Sbjct: 40  FTSKGYSGIPLLGELPIDSPLDDIWKVVAVLFKISAREEGLIF 82


>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
            protein.
          Length = 1829

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
 Frame = +2

Query: 164  LLEQGVLQKQELQRVQQAGRYLQP--MKPLAPVF 259
            L+EQ ++ +++L+R   A R+LQP  + PLA  F
Sbjct: 1591 LIEQSLVIEEQLRRAAHANRHLQPDNVGPLAQRF 1624


>AL033510-7|CAA22069.1|  124|Caenorhabditis elegans Hypothetical
           protein Y40H7A.11 protein.
          Length = 124

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 483 TKSSHSIGLMWWLLA 439
           T+  H IG+MWWL A
Sbjct: 72  TRVEHKIGIMWWLCA 86


>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
          Length = 1829

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
 Frame = +2

Query: 164  LLEQGVLQKQELQRVQQAGRYLQP--MKPLAPVF 259
            L+EQ ++ +++L+R   A R+LQP  + PLA  F
Sbjct: 1591 LIEQSLVIEEQLRRAAHANRHLQPDNVGPLAQRF 1624


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,459,105
Number of Sequences: 27780
Number of extensions: 289380
Number of successful extensions: 810
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 808
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)