Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_D21
(860 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 35 0.065
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 35 0.065
U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical pr... 35 0.086
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 33 0.26
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 33 0.35
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 32 0.46
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 32 0.60
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 1.1
AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical ... 31 1.1
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 31 1.1
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical pr... 31 1.4
U52003-5|AAG00057.1| 730|Caenorhabditis elegans P granule abnor... 31 1.4
U52003-4|ABB51171.1| 771|Caenorhabditis elegans P granule abnor... 31 1.4
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.4
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.4
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 31 1.4
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 31 1.4
AF106574-2|AAM81088.1| 315|Caenorhabditis elegans Hypothetical ... 31 1.4
AF106574-1|AAY44015.1| 317|Caenorhabditis elegans Hypothetical ... 31 1.4
AF077868-1|AAC36100.1| 730|Caenorhabditis elegans PGL-1 protein. 31 1.4
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.4
Z99278-4|CAB16492.1| 871|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z99278-3|CAB16493.1| 867|Caenorhabditis elegans Hypothetical pr... 29 4.3
AF098992-4|AAK73869.2| 250|Caenorhabditis elegans Hypothetical ... 29 4.3
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 29 4.3
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 4.3
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical pr... 29 5.6
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 29 5.6
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 29 5.6
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical pr... 28 7.4
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 28 7.4
U61288-1|AAB17543.1| 790|Caenorhabditis elegans CE protein. 28 7.4
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 28 7.4
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 28 7.4
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 28 7.4
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 28 7.4
AC024824-3|AAK85501.1| 543|Caenorhabditis elegans Hypothetical ... 28 7.4
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 28 9.8
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 28 9.8
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 9.8
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 28 9.8
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 28 9.8
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 28 9.8
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 28 9.8
AF067209-1|AAC16982.2| 553|Caenorhabditis elegans Warthog (hedg... 28 9.8
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 28 9.8
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 28 9.8
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 35.1 bits (77), Expect = 0.065
Identities = 21/79 (26%), Positives = 22/79 (27%)
Frame = +3
Query: 387 PXXPPXPAXAPRXXXXRLAAXXXXXXPXXXXRXAXPAPPPRPXXXXPLXPPWPPXXPXPX 566
P PP P+ P P P PPP P P PP P P P
Sbjct: 262 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTP-GPPGMPGMPPPP 320
Query: 567 XXXXXXPXXXXXYTXPPXP 623
P PP P
Sbjct: 321 PPSRFGPPGMGGMPPPPPP 339
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = +3
Query: 492 PAPPPRPXXXXPLXPPWPPXXPXPXXXXXXXPXXXXXYTXPPXPP 626
P PPP P P+ PP PP P P PP PP
Sbjct: 262 PVPPP-PPSVTPMPPPMPPT-PGMTPRPPPPPSSGMWPPPPPPPP 304
Score = 27.9 bits (59), Expect = 9.8
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 491 PRXPPPPXALXPSXPPLAP 547
P PPPP ++ P PP+ P
Sbjct: 261 PPVPPPPPSVTPMPPPMPP 279
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 35.1 bits (77), Expect = 0.065
Identities = 21/79 (26%), Positives = 22/79 (27%)
Frame = +3
Query: 387 PXXPPXPAXAPRXXXXRLAAXXXXXXPXXXXRXAXPAPPPRPXXXXPLXPPWPPXXPXPX 566
P PP P+ P P P PPP P P PP P P P
Sbjct: 272 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTP-GPPGMPGMPPPP 330
Query: 567 XXXXXXPXXXXXYTXPPXP 623
P PP P
Sbjct: 331 PPSRFGPPGMGGMPPPPPP 349
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = +3
Query: 492 PAPPPRPXXXXPLXPPWPPXXPXPXXXXXXXPXXXXXYTXPPXPP 626
P PPP P P+ PP PP P P PP PP
Sbjct: 272 PVPPP-PPSVTPMPPPMPPT-PGMTPRPPPPPSSGMWPPPPPPPP 314
Score = 27.9 bits (59), Expect = 9.8
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 491 PRXPPPPXALXPSXPPLAP 547
P PPPP ++ P PP+ P
Sbjct: 271 PPVPPPPPSVTPMPPPMPP 289
>U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical
protein F07C4.7 protein.
Length = 180
Score = 34.7 bits (76), Expect = 0.086
Identities = 24/82 (29%), Positives = 25/82 (30%)
Frame = -2
Query: 625 GGXGGXV*XXXXXGXXXXXXKGXGXXGGQGGXRGXXXXGRGGGAGXAXRXXXXGXXXXXX 446
GG GG G G G GG RG GRGG G G
Sbjct: 83 GGNGGFGDNGGLRGGNGGGRGGNGGFDDNGGGRGGNGGGRGGTGGFGDNGGGRGGNGGGR 142
Query: 445 AARRXXXXRGAKAGXGGXXGRP 380
G + G GG GRP
Sbjct: 143 GGNGGGNNGGGRGGNGG--GRP 162
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 33.1 bits (72), Expect = 0.26
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = -2
Query: 562 GXGXXGGQGGXRGXXXXGRGGGAG 491
G G GG GG RG GRGGG G
Sbjct: 93 GRGGGGGGGGGRGGGGGGRGGGGG 116
Score = 31.5 bits (68), Expect = 0.80
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = -2
Query: 622 GXGGXV*XXXXXGXXXXXXKGXGXXGGQGGXRGXXXXGRGGG 497
G GG G G G GG GG RG GRGGG
Sbjct: 90 GGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGGRGGG 131
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = -2
Query: 625 GGXGGXV*XXXXXGXXXXXXKGXGXXGGQGGXRGXXXXGRGGGAG 491
GG GG G G G GG G G GRGGG G
Sbjct: 82 GGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGG 126
Score = 29.5 bits (63), Expect = 3.2
Identities = 23/81 (28%), Positives = 23/81 (28%)
Frame = -2
Query: 625 GGXGGXV*XXXXXGXXXXXXKGXGXXGGQGGXRGXXXXGRGGGAGXAXRXXXXGXXXXXX 446
G GG G G G GG GG G GRGGG G G
Sbjct: 56 GRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGG-GNGGGGRGGGGGGGGGRGGGGGGRGGG 114
Query: 445 AARRXXXXRGAKAGXGGXXGR 383
G GG GR
Sbjct: 115 GGGGGGRGGGGGGRGGGGRGR 135
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 561 GXGXXGARGGXEGXXAXGGGGXRGXXXG 478
G G G RGG G GGGG G G
Sbjct: 97 GGGGGGGRGGGGGGRGGGGGGGGGRGGG 124
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 32.7 bits (71), Expect = 0.35
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -2
Query: 556 GXXGGQGGXRGXXXXGRGGGAG 491
G GG+GG RG GRGGG+G
Sbjct: 51 GTGGGRGGGRGGSGGGRGGGSG 72
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 561 GXGXXGARGGXEGXXAXGGGGXRGXXXG 478
G G G RGG G G GG RG G
Sbjct: 53 GGGRGGGRGGSGGGRGGGSGGGRGGSGG 80
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 564 RGXGXXGARGGXEGXXAXGGGGXRGXXXG 478
RG G G RGG G A G G G G
Sbjct: 67 RGGGSGGGRGGSGGAGAGGSGSGSGGWGG 95
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/47 (36%), Positives = 19/47 (40%)
Frame = -2
Query: 625 GGXGGXV*XXXXXGXXXXXXKGXGXXGGQGGXRGXXXXGRGGGAGXA 485
GG GG +G G GG GG RG G GG+G A
Sbjct: 36 GGWGGSDASAGASAGGTGGGRGGGR-GGSGGGRGGGSGGGRGGSGGA 81
Score = 27.9 bits (59), Expect = 9.8
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = -2
Query: 625 GGXGGXV*XXXXXGXXXXXXKGXGXXGGQGGXRGXXXXGRGGGAGXAXRXXXXG 464
GG G G + G GGQ G G GRGGG G R G
Sbjct: 215 GGSQGGSQGGSQGGWGNQGGQQGGGRGGQQGPGGWGGGGRGGGWGGWGRGSRWG 268
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 32.3 bits (70), Expect = 0.46
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = +3
Query: 492 PAPPPRPXXXXPLXPPWPPXXPXPXXXXXXXPXXXXXYTXPPXPP 626
PAPPP P + P PP P P P PP PP
Sbjct: 95 PAPPPAPYPQHAVPAPAPPPAPYP-QHAVPAPAPYQQQPPPPPPP 138
Score = 30.7 bits (66), Expect = 1.4
Identities = 20/80 (25%), Positives = 21/80 (26%)
Frame = +3
Query: 387 PXXPPXPAXAPRXXXXRLAAXXXXXXPXXXXRXAXPAPPPRPXXXXPLXPPWPPXXPXPX 566
P P P A A P P PPP P P P +PP P P
Sbjct: 97 PPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPPPPPHYPPPPPHYPPPPPAPH 156
Query: 567 XXXXXXPXXXXXYTXPPXPP 626
Y PP
Sbjct: 157 SAYIDHSAPRPAYIEHSAPP 176
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/62 (29%), Positives = 21/62 (33%), Gaps = 3/62 (4%)
Frame = +3
Query: 387 PXXPPXPAXAP---RXXXXRLAAXXXXXXPXXXXRXAXPAPPPRPXXXXPLXPPWPPXXP 557
P PP P AP + + A P PAPPP P + P PP
Sbjct: 27 PPPPPPPKPAPYVEQSAQPQQTAPPPPPAPYPQQAVPAPAPPPAPYPQHAVPAPAPPLAS 86
Query: 558 XP 563
P
Sbjct: 87 YP 88
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical protein
R08B4.1b protein.
Length = 1160
Score = 31.9 bits (69), Expect = 0.60
Identities = 24/80 (30%), Positives = 24/80 (30%)
Frame = -2
Query: 625 GGXGGXV*XXXXXGXXXXXXKGXGXXGGQGGXRGXXXXGRGGGAGXAXRXXXXGXXXXXX 446
GG GG G G G GG G G GGGAG G
Sbjct: 799 GGGGGGGGGSGGSGGGGSNSNSGGGGGNGGGGNGGGGNGNGGGAGDGNGGAGAGNGNGAG 858
Query: 445 AARRXXXXRGAKAGXGGXXG 386
A GA AG G G
Sbjct: 859 AGN----GNGAGAGNGNGAG 874
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/59 (30%), Positives = 19/59 (32%)
Frame = +3
Query: 381 GRPXXPPXPAXAPRXXXXRLAAXXXXXXPXXXXRXAXPAPPPRPXXXXPLXPPWPPXXP 557
G P PP P P L P PPP P P+ PP PP P
Sbjct: 26 GPPPCPPPPP--PMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMP 82
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +2
Query: 479 PXCXPRXPPPPXALXPSXPPLAP 547
P C P PPPP + P PP P
Sbjct: 60 PMCPPPPPPPPPPMCPPPPPPMP 82
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/29 (44%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = +2
Query: 479 PXCXPR-XPPPPXALXPSXPPLAPXXPXP 562
P C P+ PPPP P PP P P P
Sbjct: 49 PICPPQFCPPPPMCPPPPPPPPPPMCPPP 77
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/52 (30%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Frame = +3
Query: 498 PPPRPXXXXPLXPPWP-PXXPXPXXXXXXXPXXXXXYTXPPXPPTXLXXXXP 650
PPP P P+ P P P P P P PP PP + P
Sbjct: 27 PPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPP 78
>AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical
protein Y66H1A.4 protein.
Length = 244
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/63 (31%), Positives = 22/63 (34%), Gaps = 3/63 (4%)
Frame = -2
Query: 565 KGXGXXGGQGGXRGXXXXGRGG---GAGXAXRXXXXGXXXXXXAARRXXXXRGAKAGXGG 395
+G GG G RG GRGG G G R G R G + G GG
Sbjct: 155 RGGRGRGGDRGGRGSDRGGRGGFGRGGGGGFRGGDRGGFGGGRGGFRGGDRGGFRGGRGG 214
Query: 394 XXG 386
G
Sbjct: 215 DFG 217
Score = 29.9 bits (64), Expect = 2.4
Identities = 21/54 (38%), Positives = 22/54 (40%)
Frame = -2
Query: 556 GXXGGQGGXRGXXXXGRGGGAGXAXRXXXXGXXXXXXAARRXXXXRGAKAGXGG 395
G GG GG RG GRGGG G R G R RG + G GG
Sbjct: 5 GGRGGGGGFRG----GRGGGGGGGFRGGRGGD--------RGGGFRGGRGGFGG 46
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -2
Query: 562 GXGXXGGQGGXRGXXXXGRGGGAGXAXR 479
G G G +GG RG GRGG G R
Sbjct: 194 GGGRGGFRGGDRGGFRGGRGGDFGGRGR 221
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/61 (32%), Positives = 21/61 (34%), Gaps = 2/61 (3%)
Frame = -2
Query: 562 GXGXXGGQGGXRGXXXXGRGGGAGXAXRXXXXGXXXXXXAARRXXXXRGAKAG--XGGXX 389
G G GG+GG G G GGG R G R RG G GG
Sbjct: 11 GGGFRGGRGGGSGFTPRGGGGGFRGGDRGRSPGGFRGGDRGRSSSGFRGGDRGRSPGGFR 70
Query: 388 G 386
G
Sbjct: 71 G 71
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +2
Query: 479 PXCXPRXPPPPXALXPSXPPLAPXXPXPL 565
P P PPPP P PP P P PL
Sbjct: 104 PVPAPCCPPPPAPAAPCCPPPPPPTPSPL 132
>Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical
protein T01C3.7 protein.
Length = 352
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/61 (34%), Positives = 23/61 (37%), Gaps = 5/61 (8%)
Frame = -2
Query: 562 GXGXXGGQGGXRGXXXXGRGGGA----GXAXRXXXXGXXXXXXAARRXXXXRGA-KAGXG 398
G G GG+GG RG G GGG G R G R RG + G G
Sbjct: 12 GGGFRGGRGGDRGGSRGGFGGGGRGGYGGGDRGSFGGGDRGGFRGGRGGGDRGGFRGGRG 71
Query: 397 G 395
G
Sbjct: 72 G 72
Score = 28.7 bits (61), Expect = 5.6
Identities = 22/80 (27%), Positives = 24/80 (30%)
Frame = -2
Query: 625 GGXGGXV*XXXXXGXXXXXXKGXGXXGGQGGXRGXXXXGRGGGAGXAXRXXXXGXXXXXX 446
GG GG G +G GG+GG G GGG R G
Sbjct: 9 GGGGGGF--RGGRGGDRGGSRGGFGGGGRGGYGGGDRGSFGGGDRGGFRGGRGGGDRGGF 66
Query: 445 AARRXXXXRGAKAGXGGXXG 386
R RG G G G
Sbjct: 67 RGGRGGGDRGGFGGRGSPRG 86
>U52003-5|AAG00057.1| 730|Caenorhabditis elegans P granule
abnormality protein 1,isoform a protein.
Length = 730
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/58 (32%), Positives = 20/58 (34%), Gaps = 1/58 (1%)
Frame = -2
Query: 556 GXXGGQGGXRGXXXXGRGG-GAGXAXRXXXXGXXXXXXAARRXXXXRGAKAGXGGXXG 386
G GG+GG G GRGG G R G RG G GG G
Sbjct: 672 GGGGGRGGYGGGDRGGRGGYGGDRGGRGGYGGGDRGGRGGYGGDRGRGGYGGRGGRGG 729
>U52003-4|ABB51171.1| 771|Caenorhabditis elegans P granule
abnormality protein 1,isoform b protein.
Length = 771
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/58 (32%), Positives = 20/58 (34%), Gaps = 1/58 (1%)
Frame = -2
Query: 556 GXXGGQGGXRGXXXXGRGG-GAGXAXRXXXXGXXXXXXAARRXXXXRGAKAGXGGXXG 386
G GG+GG G GRGG G R G RG G GG G
Sbjct: 713 GGGGGRGGYGGGDRGGRGGYGGDRGGRGGYGGGDRGGRGGYGGDRGRGGYGGRGGRGG 770
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/47 (34%), Positives = 17/47 (36%), Gaps = 2/47 (4%)
Frame = +3
Query: 492 PAPPPRPXXXXPLX--PPWPPXXPXPXXXXXXXPXXXXXYTXPPXPP 626
P PPP P P+ PP PP P P PP PP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/48 (33%), Positives = 17/48 (35%), Gaps = 3/48 (6%)
Frame = +3
Query: 492 PAPPPRPXXXXPL---XPPWPPXXPXPXXXXXXXPXXXXXYTXPPXPP 626
P PPP P P+ PP PP P P PP PP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/47 (34%), Positives = 17/47 (36%), Gaps = 2/47 (4%)
Frame = +3
Query: 492 PAPPPRPXXXXPLX--PPWPPXXPXPXXXXXXXPXXXXXYTXPPXPP 626
P PPP P P+ PP PP P P PP PP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/48 (33%), Positives = 17/48 (35%), Gaps = 3/48 (6%)
Frame = +3
Query: 492 PAPPPRPXXXXPL---XPPWPPXXPXPXXXXXXXPXXXXXYTXPPXPP 626
P PPP P P+ PP PP P P PP PP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 562 GXGXXGGQGGXRGXXXXGRGGGAG 491
G G GG+GG RG GRGG G
Sbjct: 100 GGGYDGGRGGSRGGYDGGRGGYGG 123
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = -3
Query: 561 GXGXXGARGGXEGXXAXGGGGXRGXXXG 478
G G G RGG +G GGGG RG G
Sbjct: 324 GYGGGGGRGGFDGGRG-GGGGFRGGDRG 350
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/59 (30%), Positives = 18/59 (30%)
Frame = -2
Query: 562 GXGXXGGQGGXRGXXXXGRGGGAGXAXRXXXXGXXXXXXAARRXXXXRGAKAGXGGXXG 386
G GG GG G GRGGG G RG G GG G
Sbjct: 118 GGNNDGGWGGNNGGGGGGRGGGGRGGDGRGPPGSNGGGDWGGNGGGGRGGGGGRGGGGG 176
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -2
Query: 562 GXGXXGGQGGXRGXXXXGRGGGAGXAXRXXXXG 464
G G GG GG RG GGG G R G
Sbjct: 74 GGGNWGGNGGGRGDWGGNGGGGRGGGGRGDWGG 106
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = -2
Query: 625 GGXGGXV*XXXXXGXXXXXXKGXGXXGGQGGXRGXXXXGRGGGAG 491
GG GG G G G GG GG GRGGG G
Sbjct: 134 GGRGGG--GRGGDGRGPPGSNGGGDWGGNGGGGRGGGGGRGGGGG 176
>AF106574-2|AAM81088.1| 315|Caenorhabditis elegans Hypothetical
protein E02D9.1b protein.
Length = 315
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 562 GXGXXGGQGGXRGXXXXGRGGGAG 491
G G GG+GG RG GRGG G
Sbjct: 263 GRGGRGGRGGFRGGFRGGRGGFGG 286
>AF106574-1|AAY44015.1| 317|Caenorhabditis elegans Hypothetical
protein E02D9.1c protein.
Length = 317
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 562 GXGXXGGQGGXRGXXXXGRGGGAG 491
G G GG+GG RG GRGG G
Sbjct: 263 GRGGRGGRGGFRGGFRGGRGGFGG 286
>AF077868-1|AAC36100.1| 730|Caenorhabditis elegans PGL-1 protein.
Length = 730
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/58 (32%), Positives = 20/58 (34%), Gaps = 1/58 (1%)
Frame = -2
Query: 556 GXXGGQGGXRGXXXXGRGG-GAGXAXRXXXXGXXXXXXAARRXXXXRGAKAGXGGXXG 386
G GG+GG G GRGG G R G RG G GG G
Sbjct: 672 GGGGGRGGYGGGDRGGRGGYGGDRGGRGGYGGGDRGGRGGYGGDRGRGGYGGRGGRGG 729
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/47 (34%), Positives = 17/47 (36%), Gaps = 2/47 (4%)
Frame = +3
Query: 492 PAPPPRPXXXXPLX--PPWPPXXPXPXXXXXXXPXXXXXYTXPPXPP 626
P PPP P P+ PP PP P P PP PP
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 371
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/48 (33%), Positives = 17/48 (35%), Gaps = 3/48 (6%)
Frame = +3
Query: 492 PAPPPRPXXXXPL---XPPWPPXXPXPXXXXXXXPXXXXXYTXPPXPP 626
P PPP P P+ PP PP P P PP PP
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 356
>Z99278-4|CAB16492.1| 871|Caenorhabditis elegans Hypothetical
protein Y53C12B.3b protein.
Length = 871
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -2
Query: 562 GXGXXGGQGGXRGXXXXGRGGGAGXAXR 479
G G+GG RG G GGG+G R
Sbjct: 836 GGSGGSGRGGGRGGYSRGHGGGSGGGQR 863
>Z99278-3|CAB16493.1| 867|Caenorhabditis elegans Hypothetical
protein Y53C12B.3a protein.
Length = 867
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -2
Query: 562 GXGXXGGQGGXRGXXXXGRGGGAGXAXR 479
G G+GG RG G GGG+G R
Sbjct: 833 GGSGGSGRGGGRGGYSRGHGGGSGGGQR 860
>AF098992-4|AAK73869.2| 250|Caenorhabditis elegans Hypothetical
protein F53C3.6a protein.
Length = 250
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -2
Query: 562 GXGXXGGQGGXRGXXXXGRGGGAG 491
G G G +GG G GRGGG G
Sbjct: 33 GRGSSGARGGVGGRGGGGRGGGGG 56
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = -2
Query: 625 GGXGGXV*XXXXXGXXXXXXKGXGXXGGQGGXRGXXXXGRGGGAG 491
GG GG V G G G GG GG G G GGG G
Sbjct: 91 GGYGGAV------GGGGGGGYGGGHGGGHGGAVGGGYGGGGGGGG 129
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.1 bits (62), Expect = 4.3
Identities = 22/86 (25%), Positives = 25/86 (29%), Gaps = 6/86 (6%)
Frame = +3
Query: 387 PXXPPXPAXAPRXXXXRLAAXXXXXXPXXXXRXAXPAPPP------RPXXXXPLXPPWPP 548
P PP PA P R + P + P PPP P+ PP PP
Sbjct: 508 PPTPPPPAPGPHKEQRR-STSKDPPRPAPPPVSSIPPPPPIAGLLAANGTNVPIPPPPPP 566
Query: 549 XXPXPXXXXXXXPXXXXXYTXPPXPP 626
P P P PP
Sbjct: 567 PLPQNLSGAPPPPPPPPPMLGGPPPP 592
Score = 27.9 bits (59), Expect = 9.8
Identities = 18/58 (31%), Positives = 19/58 (32%)
Frame = +3
Query: 384 RPXXPPXPAXAPRXXXXRLAAXXXXXXPXXXXRXAXPAPPPRPXXXXPLXPPWPPXXP 557
RP PP + P L A P P PPP P PP PP P
Sbjct: 532 RPAPPPVSSIPPPPPIAGLLAANGTNVPIPP-----PPPPPLPQNLSGAPPPPPPPPP 584
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/43 (30%), Positives = 15/43 (34%)
Frame = +3
Query: 498 PPPRPXXXXPLXPPWPPXXPXPXXXXXXXPXXXXXYTXPPXPP 626
PPP P P P + P P P + PP PP
Sbjct: 76 PPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPP 118
>Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical protein
T07D4.3 protein.
Length = 1301
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -2
Query: 565 KGXGXXGGQGGXRGXXXXGRGGG 497
+G G GG G RG GRGGG
Sbjct: 1270 RGAGGGGGYRGGRGGRGGGRGGG 1292
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +3
Query: 498 PPPRPXXXXPLXPPWPPXXPXPXXXXXXXPXXXXXYTXPPXPP 626
PPP P P P PP P P P + PP PP
Sbjct: 77 PPPLPLSNPPAKPTPPPPPPKPTIRPPPIPA-----SPPPRPP 114
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +3
Query: 498 PPPRPXXXXPLXPPWPPXXPXPXXXXXXXPXXXXXYTXPPXPP 626
PPP P P P PP P P P + PP PP
Sbjct: 299 PPPLPLSNPPAKPTPPPPPPKPTIRPPPIPA-----SPPPRPP 336
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = +3
Query: 492 PAPPPRPXXXXPLXPPWPPXXPXPXXXXXXXPXXXXXYTXPPXPP 626
P PP P P PP P P P P + PP PP
Sbjct: 232 PGPPGAPGNDGPPGPPGPKGAPGP-----DGPPGVDGQSGPPGPP 271
>Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical
protein R08B4.1a protein.
Length = 1137
Score = 28.3 bits (60), Expect = 7.4
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = -2
Query: 556 GXXGGQGGXRGXXXXGRGGGAGXAXRXXXXGXXXXXXAARRXXXXRGAKAGXGGXXG 386
G G GG G G GGGAG G A GA AG G G
Sbjct: 799 GGGGNGGGGNGGGGNGNGGGAGDGNGGAGAGNGNGAGAGN----GNGAGAGNGNGAG 851
Score = 27.9 bits (59), Expect = 9.8
Identities = 19/59 (32%), Positives = 19/59 (32%)
Frame = -2
Query: 562 GXGXXGGQGGXRGXXXXGRGGGAGXAXRXXXXGXXXXXXAARRXXXXRGAKAGXGGXXG 386
G G GG G G G G GAG A G A GA G G G
Sbjct: 812 GNGNGGGAGDGNGGAGAGNGNGAG-AGNGNGAGAGNGNGAGAGNGNGAGAGNGNGAGAG 869
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = +3
Query: 492 PAPPPRPXXXXPLXPPWPPXXPXPXXXXXXXPXXXXXYTXPPXPP 626
P PP P P PP P P P P + PP PP
Sbjct: 227 PGPPGAPGNDGPPGPPGPKGAPGP-----DGPPGADGQSGPPGPP 266
>U61288-1|AAB17543.1| 790|Caenorhabditis elegans CE protein.
Length = 790
Score = 28.3 bits (60), Expect = 7.4
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = -2
Query: 556 GXXGGQGGXRGXXXXGRGGGAGXAXRXXXXGXXXXXXAARRXXXXRGAKAGXGGXXG 386
G G GG G G GGGAG G A GA AG G G
Sbjct: 452 GGGGNGGGGNGGGGNGNGGGAGDGNGGAGAGNGNGAGAGN----GNGAGAGNGNGAG 504
Score = 27.9 bits (59), Expect = 9.8
Identities = 19/59 (32%), Positives = 19/59 (32%)
Frame = -2
Query: 562 GXGXXGGQGGXRGXXXXGRGGGAGXAXRXXXXGXXXXXXAARRXXXXRGAKAGXGGXXG 386
G G GG G G G G GAG A G A GA G G G
Sbjct: 465 GNGNGGGAGDGNGGAGAGNGNGAG-AGNGNGAGAGNGNGAGAGNGNGAGAGNGNGAGAG 522
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/46 (28%), Positives = 16/46 (34%)
Frame = +3
Query: 492 PAPPPRPXXXXPLXPPWPPXXPXPXXXXXXXPXXXXXYTXPPXPPT 629
P PPP+ P+ PP P P PP PP+
Sbjct: 613 PPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPS 658
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/46 (28%), Positives = 16/46 (34%)
Frame = +3
Query: 492 PAPPPRPXXXXPLXPPWPPXXPXPXXXXXXXPXXXXXYTXPPXPPT 629
P PPP+ P+ PP P P PP PP+
Sbjct: 439 PPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPS 484
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +2
Query: 479 PXCXPRXPPPPXALXPSXPPLAPXXPXP 562
P C + PPP P PP P P P
Sbjct: 58 PPCPAQFCPPPPICPPPPPPPMPCPPPP 85
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/45 (33%), Positives = 15/45 (33%), Gaps = 1/45 (2%)
Frame = +3
Query: 492 PAPPPRPXXXXPLXPPWP-PXXPXPXXXXXXXPXXXXXYTXPPXP 623
P PPP P P PP P P P P Y P P
Sbjct: 72 PPPPPPPMPCPPPPPPMPRPSCPCMMQRPSFYPSYVPQYYQPMMP 116
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = +3
Query: 492 PAPPPRPXXXXPLXPPWPPXXPXPXXXXXXXPXXXXXYTXPPXPP 626
P PP P P PP P P P P + PP PP
Sbjct: 227 PGPPGAPGNDGPPGPPGPKGAPGP-----DGPPGADGQSGPPGPP 266
>AC024824-3|AAK85501.1| 543|Caenorhabditis elegans Hypothetical
protein Y55B1BR.1 protein.
Length = 543
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 498 PPPRPXXXXPLXPPWPPXXP 557
PPPRP PL PP P P
Sbjct: 126 PPPRPPPVPPLSPPERPDIP 145
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -2
Query: 565 KGXGXXGGQGGXRGXXXXGRGGGAG 491
+G GG+GG G GRGGG G
Sbjct: 21 RGGYGGGGRGGGGGGYSGGRGGGYG 45
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 27.9 bits (59), Expect = 9.8
Identities = 19/58 (32%), Positives = 21/58 (36%), Gaps = 1/58 (1%)
Frame = -2
Query: 556 GXXGGQGGXRGXXXXGRGGGA-GXAXRXXXXGXXXXXXAARRXXXXRGAKAGXGGXXG 386
G GG+GG G GRGGG G R G + G G GG G
Sbjct: 809 GGYGGRGGGFGGTGRGRGGGVFGGGGRGGDFGGSGNFGGSGGGGSF-GGSGGGGGFGG 865
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/53 (30%), Positives = 18/53 (33%)
Frame = +3
Query: 492 PAPPPRPXXXXPLXPPWPPXXPXPXXXXXXXPXXXXXYTXPPXPPTXLXXXXP 650
P PPP P+ PP P P P T PP PP + P
Sbjct: 503 PPPPPPLLGIAPMSTNAPPPPPMPGMA----PLSTGAPTPPPPPPVGMANGGP 551
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +3
Query: 492 PAPPPRPXXXXPLXPPWPPXXPXPXXXXXXXPXXXXXYTXPPXPP 626
P PP P P PP P P P P PP PP
Sbjct: 234 PGPPGAPGNDGPPGPPGPKGSPGP-----DGPAGVDGQAGPPGPP 273
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = +3
Query: 492 PAPPPRPXXXXPLXPPWPPXXPXPXXXXXXXPXXXXXYTXPPXPPTXLXXXXPS 653
P PPPR PP PP P P PP P PS
Sbjct: 124 PPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPS 177
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/57 (28%), Positives = 18/57 (31%)
Frame = +3
Query: 387 PXXPPXPAXAPRXXXXRLAAXXXXXXPXXXXRXAXPAPPPRPXXXXPLXPPWPPXXP 557
P PP P A + + A P PPP P P P PP P
Sbjct: 122 PVPPPAPVPAVEGKKPSIVSSSSFSH-HGATSSAPPPPPPPPPVSVPSSKPTPPPPP 177
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/57 (28%), Positives = 18/57 (31%)
Frame = +3
Query: 387 PXXPPXPAXAPRXXXXRLAAXXXXXXPXXXXRXAXPAPPPRPXXXXPLXPPWPPXXP 557
P PP P A + + A P PPP P P P PP P
Sbjct: 122 PVPPPAPVPAVEGKKPSIVSSSSFSH-HGATSSAPPPPPPPPPVSVPSSKPTPPPPP 177
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 27.9 bits (59), Expect = 9.8
Identities = 18/59 (30%), Positives = 21/59 (35%)
Frame = +3
Query: 387 PXXPPXPAXAPRXXXXRLAAXXXXXXPXXXXRXAXPAPPPRPXXXXPLXPPWPPXXPXP 563
P P PA P R+ P + + P PPP P P P PP P P
Sbjct: 466 PPTTPKPAPPP---PSRIPNPSPSPQPAEVSK-SPPPPPPLPPIATPSSVPPPPPPPPP 520
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +3
Query: 498 PPPRPXXXXPLXPPWPPXXPXPXXXXXXXPXXXXXYTXPPXPP 626
P P P PP PP P P P T PP PP
Sbjct: 536 PSPEPSPVREPTPPPPPREPTP-REPTPEPEPVREPTPPPPPP 577
>AF067209-1|AAC16982.2| 553|Caenorhabditis elegans Warthog
(hedgehog-like family)protein 9 protein.
Length = 553
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/45 (33%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
Frame = +3
Query: 492 PAPPPRPXXXXPLXPPWPP-XXPXPXXXXXXXPXXXXXYTXPPXP 623
P PPP P PL PP+P P P P + P P
Sbjct: 347 PTPPPNPFVFAPL-PPFPQFGLPQPNLFQFPAPPAPPPFGVPQAP 390
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = -2
Query: 625 GGXGGXV*XXXXXGXXXXXXKGXGXXGGQGGXRGXXXXGRGGGAG 491
GG GG G G G GG GG G G GG G
Sbjct: 112 GGYGGGGYGGGGDGGGGYGGYGGGGYGGMGGGPGGYGMGGYGGGG 156
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +3
Query: 492 PAPPPRPXXXXPLXPPWPPXXPXPXXXXXXXPXXXXXYTXPPXPP 626
P PP P P PP P P P P PP PP
Sbjct: 234 PGPPGAPGNDGPPGPPGPKGSPGP-----DGPAGVDGQAGPPGPP 273
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,016,747
Number of Sequences: 27780
Number of extensions: 157071
Number of successful extensions: 1739
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1244
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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