Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_D19
(767 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 59 6e-09
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 59 6e-09
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 55 1e-07
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 52 1e-06
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 48 1e-05
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 48 1e-05
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 46 8e-05
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 44 3e-04
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 44 3e-04
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 32 0.99
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 32 0.99
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 32 0.99
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 31 1.3
BT010068-1|AAQ22537.1| 328|Drosophila melanogaster LD13846p pro... 29 7.0
AE014298-670|AAF45978.1| 328|Drosophila melanogaster CG7010-PB,... 29 7.0
AE014298-669|AAN09129.1| 399|Drosophila melanogaster CG7010-PD,... 29 7.0
AE014298-668|AAF45976.1| 399|Drosophila melanogaster CG7010-PA,... 29 7.0
AE014298-667|AAF45977.1| 443|Drosophila melanogaster CG7010-PC,... 29 7.0
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 59.3 bits (137), Expect = 6e-09
Identities = 28/75 (37%), Positives = 46/75 (61%)
Frame = -3
Query: 666 PVITYGSVVXGHAARTHIDTLQSXQSRFCRLAVGAP*FVRNIDLHDDLGLESIQKYMKSV 487
P+ TYGS + G+A+R++ID +Q QSR R+ GAP ++RN ++H DL ++ + + +
Sbjct: 792 PIWTYGSELWGNASRSNIDIIQRAQSRILRIITGAPWYLRNENIHRDLKIKLVIEVIAEK 851
Query: 486 *ERYFAKAMRHDNRL 442
+Y K H N L
Sbjct: 852 KTKYNEKLTTHTNPL 866
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 59.3 bits (137), Expect = 6e-09
Identities = 28/75 (37%), Positives = 46/75 (61%)
Frame = -3
Query: 666 PVITYGSVVXGHAARTHIDTLQSXQSRFCRLAVGAP*FVRNIDLHDDLGLESIQKYMKSV 487
P+ TYGS + G+A+R++ID +Q QSR R+ GAP ++RN ++H DL ++ + + +
Sbjct: 792 PIWTYGSELWGNASRSNIDIIQRAQSRILRIITGAPWYLRNENIHRDLKIKLVIEVIAEK 851
Query: 486 *ERYFAKAMRHDNRL 442
+Y K H N L
Sbjct: 852 KTKYNEKLTTHTNPL 866
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 54.8 bits (126), Expect = 1e-07
Identities = 35/98 (35%), Positives = 50/98 (51%)
Frame = -3
Query: 654 YGSVVXGHAARTHIDTLQSXQSRFCRLAVGAP*FVRNIDLHDDLGLESIQKYMKSV*ERY 475
YG + G A +HI +Q+ Q++ RL G FVRN LH DL L ++ + RY
Sbjct: 805 YGCQIWGLACDSHIKRIQAIQNKVARLITGCEWFVRNTTLHRDLKLATVFDEINKHSSRY 864
Query: 474 FAKAMRHDNRLIVAAADYSPNPDHAGASHRRLPRHVLT 361
+ RH NRL +A + S P +RR PR ++T
Sbjct: 865 HDRLERHRNRL-ASALNRSRPPRRL---NRRQPRDLIT 898
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 51.6 bits (118), Expect = 1e-06
Identities = 23/64 (35%), Positives = 40/64 (62%)
Frame = -3
Query: 666 PVITYGSVVXGHAARTHIDTLQSXQSRFCRLAVGAP*FVRNIDLHDDLGLESIQKYMKSV 487
P+ TYGS + G+A+ ++ID +Q QS+ R GAP +VR+ ++ DL + S+ + +
Sbjct: 794 PIWTYGSQLWGNASNSNIDIIQRAQSKILRTITGAPWYVRSENIQRDLNIPSVTNAITEL 853
Query: 486 *ERY 475
E+Y
Sbjct: 854 KEKY 857
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 48.0 bits (109), Expect = 1e-05
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Frame = -3
Query: 666 PVITYGSVVXGHAARTHIDTLQSXQSRFCRLAVGAP*FVRNIDLHDDLGLESIQKYMKSV 487
P + YG V G AA++H++ ++ Q++ R GAP ++R D+ DL + + ++++
Sbjct: 806 PCLFYGLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDIERDLKVPKLGDKLQNI 865
Query: 486 *ERYFAKAMRHDNRLIVAAADYS-PNPDHAGASHRRLPRH 370
++Y + H N L + N D RRL RH
Sbjct: 866 AQKYMERLNVHPNSLARKLGTAAVVNADPRTRVKRRLKRH 905
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 48.0 bits (109), Expect = 1e-05
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Frame = -3
Query: 666 PVITYGSVVXGHAARTHIDTLQSXQSRFCRLAVGAP*FVRNIDLHDDLGLESIQKYMKSV 487
P + YG V G AA++H++ ++ Q++ R GAP ++R D+ DL + + ++++
Sbjct: 608 PCLFYGLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDIERDLKVPKLGDKLQNI 667
Query: 486 *ERYFAKAMRHDNRLIVAAADYS-PNPDHAGASHRRLPRH 370
++Y + H N L + N D RRL RH
Sbjct: 668 AQKYLERLNVHPNSLARKLGTAAVVNADPRTRVKRRLKRH 707
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 45.6 bits (103), Expect = 8e-05
Identities = 23/75 (30%), Positives = 39/75 (52%)
Frame = -3
Query: 666 PVITYGSVVXGHAARTHIDTLQSXQSRFCRLAVGAP*FVRNIDLHDDLGLESIQKYMKSV 487
P+ YG + G AA+++ + +Q Q+R R P +VR LH DL L ++++ +
Sbjct: 807 PIWLYGIQIWGIAAKSNYNRIQVLQNRAMRAITDCPYYVRGTTLHRDLNLHTVEEQISRH 866
Query: 486 *ERYFAKAMRHDNRL 442
RY + RH + L
Sbjct: 867 TSRYSDRLRRHHSIL 881
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 43.6 bits (98), Expect = 3e-04
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = -3
Query: 666 PVITYGSVVXGHAARTHIDTLQSXQSRFCRLAVGAP*FVRNIDLHDDLGLESIQK 502
P++ YGS V G A+THI LQ Q++ +L + P + LH G++ +Q+
Sbjct: 826 PILMYGSPVWGRCAQTHIKKLQICQNKLLKLIMNLPYYTNTKYLHIKAGVQKVQQ 880
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 43.6 bits (98), Expect = 3e-04
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = -3
Query: 666 PVITYGSVVXGHAARTHIDTLQSXQSRFCRLAVGAP*FVRNIDLHDDLGLESIQK 502
P++ YGS V G A+THI LQ Q++ +L + P + LH G++ +Q+
Sbjct: 774 PILMYGSPVWGRCAQTHIKKLQICQNKLLKLIMNLPYYTNTKYLHIKAGVQKVQQ 828
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 31.9 bits (69), Expect = 0.99
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Frame = -3
Query: 666 PVITYGSVVXGH-AARTHIDTLQSXQSRFCRLAVGAP*FVRNIDLHDDLGLESIQKYMKS 490
P+ Y + G + T +Q+ ++++ R + A + R D+ ++S +
Sbjct: 864 PIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDEIFDK 923
Query: 489 V*ERYFAKAMRHDNRLI--VAAADYSPN 412
+RY H+N LI + Y PN
Sbjct: 924 ASQRYANSLTDHENPLIYDLLINAYKPN 951
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 31.9 bits (69), Expect = 0.99
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Frame = -3
Query: 666 PVITYGSVVXGH-AARTHIDTLQSXQSRFCRLAVGAP*FVRNIDLHDDLGLESIQKYMKS 490
P+ Y + G + T +Q+ ++++ R + A + R D+ ++S +
Sbjct: 864 PIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDEIFDK 923
Query: 489 V*ERYFAKAMRHDNRLI--VAAADYSPN 412
+RY H+N LI + Y PN
Sbjct: 924 ASQRYANSLTDHENPLIYDLLINAYKPN 951
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 31.9 bits (69), Expect = 0.99
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Frame = -3
Query: 666 PVITYGSVVXGH-AARTHIDTLQSXQSRFCRLAVGAP*FVRNIDLHDDLGLESIQKYMKS 490
P+ Y + G + T +Q+ ++++ R + A + R D+ ++S +
Sbjct: 864 PIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDEIFDK 923
Query: 489 V*ERYFAKAMRHDNRLI--VAAADYSPN 412
+RY H+N LI + Y PN
Sbjct: 924 ASQRYANSLTDHENPLIYDLLINAYKPN 951
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 31.5 bits (68), Expect = 1.3
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Frame = -3
Query: 666 PVITYGSVVXGH-AARTHIDTLQSXQSRFCRLAVGAP*FVRNIDLHDDLGLESIQKYMKS 490
P+ Y + G + T +Q+ ++++ R + A + R D+ ++S +
Sbjct: 417 PIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDETFDK 476
Query: 489 V*ERYFAKAMRHDNRLI--VAAADYSPN 412
+RY H+N LI + Y PN
Sbjct: 477 ASQRYANSLTDHENPLIYDLLINAYKPN 504
>BT010068-1|AAQ22537.1| 328|Drosophila melanogaster LD13846p
protein.
Length = 328
Score = 29.1 bits (62), Expect = 7.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 206 IRRETQRADSWVRLHGELFVEFDEYRYGG 292
+R T+ A ++V HG L +E + YRY G
Sbjct: 195 VRSATEFAINYVNTHGPLVMETNTYRYSG 223
>AE014298-670|AAF45978.1| 328|Drosophila melanogaster CG7010-PB,
isoform B protein.
Length = 328
Score = 29.1 bits (62), Expect = 7.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 206 IRRETQRADSWVRLHGELFVEFDEYRYGG 292
+R T+ A ++V HG L +E + YRY G
Sbjct: 195 VRSATEFAINYVNTHGPLVMETNTYRYSG 223
>AE014298-669|AAN09129.1| 399|Drosophila melanogaster CG7010-PD,
isoform D protein.
Length = 399
Score = 29.1 bits (62), Expect = 7.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 206 IRRETQRADSWVRLHGELFVEFDEYRYGG 292
+R T+ A ++V HG L +E + YRY G
Sbjct: 266 VRSATEFAINYVNTHGPLVMETNTYRYSG 294
>AE014298-668|AAF45976.1| 399|Drosophila melanogaster CG7010-PA,
isoform A protein.
Length = 399
Score = 29.1 bits (62), Expect = 7.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 206 IRRETQRADSWVRLHGELFVEFDEYRYGG 292
+R T+ A ++V HG L +E + YRY G
Sbjct: 266 VRSATEFAINYVNTHGPLVMETNTYRYSG 294
>AE014298-667|AAF45977.1| 443|Drosophila melanogaster CG7010-PC,
isoform C protein.
Length = 443
Score = 29.1 bits (62), Expect = 7.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 206 IRRETQRADSWVRLHGELFVEFDEYRYGG 292
+R T+ A ++V HG L +E + YRY G
Sbjct: 310 VRSATEFAINYVNTHGPLVMETNTYRYSG 338
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,673,363
Number of Sequences: 53049
Number of extensions: 606693
Number of successful extensions: 1257
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1257
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3540671772
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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