Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_D17
(869 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC010634-1|AAH10634.1| 586|Homo sapiens SLU7 splicing factor ho... 229 1e-59
AF101074-1|AAD13774.1| 586|Homo sapiens step II splicing factor... 229 1e-59
U02609-1|AAA18945.1| 519|Homo sapiens transducin-like protein p... 32 3.1
Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein. 31 4.1
X74955-1|CAA52910.1| 622|Homo sapiens mucin protein. 31 4.1
EF011614-1|ABK41104.1| 446|Homo sapiens CDW4/GRWD1 protein. 31 4.1
BC002440-1|AAH02440.1| 446|Homo sapiens glutamate-rich WD repea... 31 4.1
AK074676-1|BAC11130.1| 446|Homo sapiens protein ( Homo sapiens ... 31 4.1
AF337808-1|AAK17998.1| 446|Homo sapiens glutamate rich WD repea... 31 4.1
AF253321-1|AAF64523.1| 716|Homo sapiens cervical mucin MUC5B pr... 31 4.1
AB075822-1|BAB85528.1| 445|Homo sapiens KIAA1942 protein protein. 31 4.1
X74370-1|CAA52408.1| 543|Homo sapiens mucin protein. 31 5.4
AF253515-1|AAN70985.1| 1957|Homo sapiens BAF250b subunit protein. 30 9.5
>BC010634-1|AAH10634.1| 586|Homo sapiens SLU7 splicing factor
homolog (S. cerevisiae) protein.
Length = 586
Score = 229 bits (559), Expect = 1e-59
Identities = 103/188 (54%), Positives = 130/188 (69%), Gaps = 3/188 (1%)
Frame = -3
Query: 630 NXDPNSAYYDPQDSXYERQPPL---LTYPESEYGGENSVRVSGDTAQHAAAQLFAWEARA 460
N DPNSAYYDP+ P E Y G+N VR +GDT A QLFAWEA
Sbjct: 277 NLDPNSAYYDPKTRAMRENPYANAGKNPDEVSYAGDNFVRYTGDTISMAQTQLFAWEAYD 336
Query: 459 HGLDLHLLAEPTKLQMLQAHYKRDQQRYKSQVKQSILEKYGGEEHLQSVPRELLLAQTEV 280
G ++HL A+PTKL++L +K ++ +K Q K+SILEKYGG+EHL + P ELLLAQTE
Sbjct: 337 KGSEVHLQADPTKLELLYKSFKVKKEDFKEQQKESILEKYGGQEHLDAPPAELLLAQTED 396
Query: 279 FTRYNRDGTLVSGAEKQLAKSKYEEDALINNHTTVWGSYWRDGQWGYKCCHSFIKMSYCV 100
+ Y+R GT++ G E+ +A SKYEED I+NHT +WGSYW++G+WGYKCCHSF K SYC
Sbjct: 397 YVEYSRHGTVIKGQERAVACSKYEEDVKIHNHTHIWGSYWKEGRWGYKCCHSFFKYSYCT 456
Query: 99 GEAGKTVV 76
GEAGK +V
Sbjct: 457 GEAGKEIV 464
>AF101074-1|AAD13774.1| 586|Homo sapiens step II splicing factor
SLU7 protein.
Length = 586
Score = 229 bits (559), Expect = 1e-59
Identities = 103/188 (54%), Positives = 130/188 (69%), Gaps = 3/188 (1%)
Frame = -3
Query: 630 NXDPNSAYYDPQDSXYERQPPL---LTYPESEYGGENSVRVSGDTAQHAAAQLFAWEARA 460
N DPNSAYYDP+ P E Y G+N VR +GDT A QLFAWEA
Sbjct: 277 NLDPNSAYYDPKTRAMRENPYANAGKNPDEVSYAGDNFVRYTGDTISMAQTQLFAWEAYD 336
Query: 459 HGLDLHLLAEPTKLQMLQAHYKRDQQRYKSQVKQSILEKYGGEEHLQSVPRELLLAQTEV 280
G ++HL A+PTKL++L +K ++ +K Q K+SILEKYGG+EHL + P ELLLAQTE
Sbjct: 337 KGSEVHLQADPTKLELLYKSFKVKKEDFKEQQKESILEKYGGQEHLDAPPAELLLAQTED 396
Query: 279 FTRYNRDGTLVSGAEKQLAKSKYEEDALINNHTTVWGSYWRDGQWGYKCCHSFIKMSYCV 100
+ Y+R GT++ G E+ +A SKYEED I+NHT +WGSYW++G+WGYKCCHSF K SYC
Sbjct: 397 YVEYSRHGTVIKGQERAVACSKYEEDVKIHNHTHIWGSYWKEGRWGYKCCHSFFKYSYCT 456
Query: 99 GEAGKTVV 76
GEAGK +V
Sbjct: 457 GEAGKEIV 464
>U02609-1|AAA18945.1| 519|Homo sapiens transducin-like protein
protein.
Length = 519
Score = 31.9 bits (69), Expect = 3.1
Identities = 14/31 (45%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = -1
Query: 323 SSPYPGSCCWPRPK-CSPATTGTARSSAGQR 234
SS P + CWPRP+ +P+++G +R+SA R
Sbjct: 413 SSSLPWTRCWPRPQLMAPSSSGHSRTSAVSR 443
>Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.
Length = 3570
Score = 31.5 bits (68), Expect = 4.1
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = -1
Query: 329 STSSPYPGSCCWPRPKCSPATTGTARSSAGQRSNLPR 219
+T S PG+ P+ SPATT TA SS S+ PR
Sbjct: 2884 ATPSSTPGTAPPPKVLTSPATTPTATSSKATSSSSPR 2920
>X74955-1|CAA52910.1| 622|Homo sapiens mucin protein.
Length = 622
Score = 31.5 bits (68), Expect = 4.1
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = -1
Query: 329 STSSPYPGSCCWPRPKCSPATTGTARSSAGQRSNLPR 219
+T S PG+ P+ SPATT TA SS S+ PR
Sbjct: 98 ATPSSTPGTAPPPKVLTSPATTPTATSSKATSSSSPR 134
>EF011614-1|ABK41104.1| 446|Homo sapiens CDW4/GRWD1 protein.
Length = 446
Score = 31.5 bits (68), Expect = 4.1
Identities = 25/91 (27%), Positives = 38/91 (41%)
Frame = -3
Query: 654 GTQPSTCGNXDPNSAYYDPQDSXYERQPPLLTYPESEYGGENSVRVSGDTAQHAAAQLFA 475
GT+P D D +D ER+P L YGG N VRVS + A +++
Sbjct: 113 GTKPPPSEGSDEEEEEEDEEDEE-ERKPQLELAMVPHYGGINRVRVSW-LGEEPVAGVWS 170
Query: 474 WEARAHGLDLHLLAEPTKLQMLQAHYKRDQQ 382
+ + L L + + A + RD+Q
Sbjct: 171 EKGQVEVFALRRLLQVVEEPQALAAFLRDEQ 201
>BC002440-1|AAH02440.1| 446|Homo sapiens glutamate-rich WD repeat
containing 1 protein.
Length = 446
Score = 31.5 bits (68), Expect = 4.1
Identities = 25/91 (27%), Positives = 38/91 (41%)
Frame = -3
Query: 654 GTQPSTCGNXDPNSAYYDPQDSXYERQPPLLTYPESEYGGENSVRVSGDTAQHAAAQLFA 475
GT+P D D +D ER+P L YGG N VRVS + A +++
Sbjct: 113 GTKPPPSEGSDEEEEEEDEEDEE-ERKPQLELAMVPHYGGINRVRVSW-LGEEPVAGVWS 170
Query: 474 WEARAHGLDLHLLAEPTKLQMLQAHYKRDQQ 382
+ + L L + + A + RD+Q
Sbjct: 171 EKGQVEVFALRRLLQVVEEPQALAAFLRDEQ 201
>AK074676-1|BAC11130.1| 446|Homo sapiens protein ( Homo sapiens
cDNA FLJ90195 fis, clone MAMMA1001310. ).
Length = 446
Score = 31.5 bits (68), Expect = 4.1
Identities = 25/91 (27%), Positives = 38/91 (41%)
Frame = -3
Query: 654 GTQPSTCGNXDPNSAYYDPQDSXYERQPPLLTYPESEYGGENSVRVSGDTAQHAAAQLFA 475
GT+P D D +D ER+P L YGG N VRVS + A +++
Sbjct: 113 GTKPPPSEGSDEEEEEEDEEDEE-ERKPQLELAMVPHYGGINRVRVSW-LGEEPVAGVWS 170
Query: 474 WEARAHGLDLHLLAEPTKLQMLQAHYKRDQQ 382
+ + L L + + A + RD+Q
Sbjct: 171 EKGQVEVFALRRLLQVVEEPQALAAFLRDEQ 201
>AF337808-1|AAK17998.1| 446|Homo sapiens glutamate rich WD repeat
protein protein.
Length = 446
Score = 31.5 bits (68), Expect = 4.1
Identities = 25/91 (27%), Positives = 38/91 (41%)
Frame = -3
Query: 654 GTQPSTCGNXDPNSAYYDPQDSXYERQPPLLTYPESEYGGENSVRVSGDTAQHAAAQLFA 475
GT+P D D +D ER+P L YGG N VRVS + A +++
Sbjct: 113 GTKPPPSEGSDEEEEEEDEEDEE-ERKPQLELAMVPHYGGINRVRVSW-LGEEPVAGVWS 170
Query: 474 WEARAHGLDLHLLAEPTKLQMLQAHYKRDQQ 382
+ + L L + + A + RD+Q
Sbjct: 171 EKGQVEVFALRRLLQVVEEPQALAAFLRDEQ 201
>AF253321-1|AAF64523.1| 716|Homo sapiens cervical mucin MUC5B
protein.
Length = 716
Score = 31.5 bits (68), Expect = 4.1
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = -1
Query: 329 STSSPYPGSCCWPRPKCSPATTGTARSSAGQRSNLPR 219
+T S PG+ P+ SPATT TA SS S+ PR
Sbjct: 358 ATPSSTPGTAPPPKVLTSPATTPTATSSKATSSSSPR 394
>AB075822-1|BAB85528.1| 445|Homo sapiens KIAA1942 protein protein.
Length = 445
Score = 31.5 bits (68), Expect = 4.1
Identities = 25/91 (27%), Positives = 38/91 (41%)
Frame = -3
Query: 654 GTQPSTCGNXDPNSAYYDPQDSXYERQPPLLTYPESEYGGENSVRVSGDTAQHAAAQLFA 475
GT+P D D +D ER+P L YGG N VRVS + A +++
Sbjct: 112 GTKPPPSEGSDEEEEEEDEEDEE-ERKPQLELAMVPHYGGINRVRVSW-LGEEPVAGVWS 169
Query: 474 WEARAHGLDLHLLAEPTKLQMLQAHYKRDQQ 382
+ + L L + + A + RD+Q
Sbjct: 170 EKGQVEVFALRRLLQVVEEPQALAAFLRDEQ 200
>X74370-1|CAA52408.1| 543|Homo sapiens mucin protein.
Length = 543
Score = 31.1 bits (67), Expect = 5.4
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -1
Query: 329 STSSPY-PGSCCWPRPKCSPATTGTARSSAGQRSNLPR 219
ST++P PG+ P+ SPATT TA SS S+ PR
Sbjct: 48 STATPSTPGTAPPPKVLTSPATTPTATSSKATSSSSPR 85
>AF253515-1|AAN70985.1| 1957|Homo sapiens BAF250b subunit protein.
Length = 1957
Score = 30.3 bits (65), Expect = 9.5
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = -3
Query: 648 QPSTCGNXDPNSAYYDPQDSXYERQPPLLTYPESEYGGENSVRVSGDTAQ 499
Q ++ G P + Y PQ + Y R P P + Y G+ V VS Q
Sbjct: 541 QSNSSGTYGPQMSQYGPQGN-YSRPPAYSGVPSASYSGQGPVWVSSANNQ 589
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,667,377
Number of Sequences: 237096
Number of extensions: 2015812
Number of successful extensions: 5287
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5047
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5283
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11048563978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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