Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_T7_D17
         (869 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71181-6|CAA94899.1|  647|Caenorhabditis elegans Hypothetical pr...   181   5e-46
U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily ass...    30   2.5  
AC084158-15|AAK68556.1|  190|Caenorhabditis elegans Hypothetical...    29   5.7  
Z68507-7|CAA92830.1| 1646|Caenorhabditis elegans Hypothetical pr...    28   7.5  
Z68297-7|CAA92597.1| 1646|Caenorhabditis elegans Hypothetical pr...    28   7.5  
AC024810-3|AAU20831.1|  660|Caenorhabditis elegans Vasa- and bel...    28   7.5  
AC024810-2|AAK68520.1|  644|Caenorhabditis elegans Vasa- and bel...    28   7.5  
AC024810-1|AAF60764.1|  641|Caenorhabditis elegans Vasa- and bel...    28   7.5  
U80846-5|AAP82647.1|  825|Caenorhabditis elegans Hypothetical pr...    28   10.0 
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr...    28   10.0 
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr...    28   10.0 

>Z71181-6|CAA94899.1|  647|Caenorhabditis elegans Hypothetical
           protein K07C5.6 protein.
          Length = 647

 Score =  181 bits (441), Expect = 5e-46
 Identities = 87/206 (42%), Positives = 126/206 (61%), Gaps = 5/206 (2%)
 Frame = -3

Query: 630 NXDPNSAYYDPQDSXYERQPPLLTYPESE-----YGGENSVRVSGDTAQHAAAQLFAWEA 466
           N   NS YYDP+ S   R+ P       E     + G+N VR SG+      AQ+FAW+A
Sbjct: 252 NLAENSPYYDPK-SRSMRENPFAGVAGKELEAARFSGDNFVRYSGEVTAANEAQVFAWQA 310

Query: 465 RAHGLDLHLLAEPTKLQMLQAHYKRDQQRYKSQVKQSILEKYGGEEHLQSVPRELLLAQT 286
              G+  H +AEPTKL+ L+  Y++++   K++ ++ +L+KYGG EH++    ELLLAQT
Sbjct: 311 TRGGVYAHSIAEPTKLEALKKEYEKEKSTLKNETQKELLDKYGGGEHMERPADELLLAQT 370

Query: 285 EVFTRYNRDGTLVSGAEKQLAKSKYEEDALINNHTTVWGSYWRDGQWGYKCCHSFIKMSY 106
           E +  YNR G ++ G EK    S+++ED    NHT+V+GS+WR+G+WGYKCCH F+K SY
Sbjct: 371 ESYIEYNRKGKVIKGKEKVAISSRFKEDIYPQNHTSVFGSFWREGRWGYKCCHQFVKNSY 430

Query: 105 CVGEAGKTVVLPVSDDKKLSTSTDGI 28
           C G+ G  +    S  K  +TS + I
Sbjct: 431 CTGKQG--IEAETSAAKGTTTSNEEI 454


>U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 59 protein.
          Length = 1592

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 11/48 (22%), Positives = 27/48 (56%)
 Frame = -3

Query: 444 HLLAEPTKLQMLQAHYKRDQQRYKSQVKQSILEKYGGEEHLQSVPREL 301
           H      +++ L+AHY+R Q+  +  V+Q  +E  G  + ++ + +++
Sbjct: 687 HTAQSEQEMKQLEAHYERAQKMLQDNVEQMNVENRGLRDEIEKLSQQM 734



 Score = 28.7 bits (61), Expect = 5.7
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -3

Query: 138 KCCHSFIKMSYCVGEAGKTVVLPVSDDKKLSTSTD 34
           +CC+S ++   C+ E  ++V   +S  KKL  S D
Sbjct: 47  ECCNSTLRKEKCIAEFVESVKTVISKAKKLRLSRD 81


>AC084158-15|AAK68556.1|  190|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.12 protein.
          Length = 190

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -3

Query: 441 LLAEPTKLQMLQAHYKRDQQRYKSQVKQSILEKYG 337
           LL     LQ ++AH K++  R+KS  + S  +K G
Sbjct: 89  LLETQANLQKIRAHMKKNALRHKSDTRTSKFKKMG 123


>Z68507-7|CAA92830.1| 1646|Caenorhabditis elegans Hypothetical protein
            F11A10.4 protein.
          Length = 1646

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -3

Query: 429  PTKLQMLQAHYKRDQQRYKSQVKQSILE-KYGGEEHLQSVPRELLLAQTEVFTRYNRDGT 253
            P  +Q++ A    D +   S V+Q  L  +    + LQS+P + +    E  +RY++  T
Sbjct: 876  PNVIQIISAIIDSDTECELSLVRQGYLGLRLVSSDFLQSIPFDCISGLVEAISRYSKQNT 935


>Z68297-7|CAA92597.1| 1646|Caenorhabditis elegans Hypothetical protein
            F11A10.4 protein.
          Length = 1646

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -3

Query: 429  PTKLQMLQAHYKRDQQRYKSQVKQSILE-KYGGEEHLQSVPRELLLAQTEVFTRYNRDGT 253
            P  +Q++ A    D +   S V+Q  L  +    + LQS+P + +    E  +RY++  T
Sbjct: 876  PNVIQIISAIIDSDTECELSLVRQGYLGLRLVSSDFLQSIPFDCISGLVEAISRYSKQNT 935


>AC024810-3|AAU20831.1|  660|Caenorhabditis elegans Vasa- and
           belle-like helicase protein1, isoform c protein.
          Length = 660

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = -3

Query: 441 LLAEPTKLQMLQAHYKRDQQRYKSQVKQSILEKYGGEEH 325
           L+  PT+   +Q H +  +  YKS ++ +IL  YGG E+
Sbjct: 226 LVLSPTRELAIQIHKEATKFSYKSNIQTAIL--YGGREN 262


>AC024810-2|AAK68520.1|  644|Caenorhabditis elegans Vasa- and
           belle-like helicase protein1, isoform b protein.
          Length = 644

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = -3

Query: 441 LLAEPTKLQMLQAHYKRDQQRYKSQVKQSILEKYGGEEH 325
           L+  PT+   +Q H +  +  YKS ++ +IL  YGG E+
Sbjct: 210 LVLSPTRELAIQIHKEATKFSYKSNIQTAIL--YGGREN 246


>AC024810-1|AAF60764.1|  641|Caenorhabditis elegans Vasa- and
           belle-like helicase protein1, isoform a protein.
          Length = 641

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = -3

Query: 441 LLAEPTKLQMLQAHYKRDQQRYKSQVKQSILEKYGGEEH 325
           L+  PT+   +Q H +  +  YKS ++ +IL  YGG E+
Sbjct: 207 LVLSPTRELAIQIHKEATKFSYKSNIQTAIL--YGGREN 243


>U80846-5|AAP82647.1|  825|Caenorhabditis elegans Hypothetical
           protein K06A9.1c protein.
          Length = 825

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -1

Query: 329 STSSPYPGSCCWPRPKCSPATTGTARSSAGQRS 231
           S++SP P S   P P  SPA+TG+  + +G  S
Sbjct: 318 SSTSPAPSSS--PNPSSSPASTGSTITISGSSS 348


>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
           protein K06A9.1a protein.
          Length = 1032

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -1

Query: 329 STSSPYPGSCCWPRPKCSPATTGTARSSAGQRS 231
           S++SP P S   P P  SPA+TG+  + +G  S
Sbjct: 525 SSTSPAPSSS--PNPSSSPASTGSTITISGSSS 555


>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
           protein K06A9.1b protein.
          Length = 2232

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -1

Query: 329 STSSPYPGSCCWPRPKCSPATTGTARSSAGQRS 231
           S++SP P S   P P  SPA+TG+  + +G  S
Sbjct: 525 SSTSPAPSSS--PNPSSSPASTGSTITISGSSS 555


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,904,501
Number of Sequences: 27780
Number of extensions: 286163
Number of successful extensions: 1012
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1011
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)