Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_D17
(869 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 25 1.2
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 23 4.8
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 22 6.4
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 8.5
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 8.5
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 8.5
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 8.5
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 8.5
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 8.5
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 8.5
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 8.5
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 24.6 bits (51), Expect = 1.2
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -3
Query: 528 SVRVSGDTAQHAAAQLFAWEARAHGLDLHLLAEPTKLQ 415
+V+ S QHAA ++ + HG LH+ + P+ +Q
Sbjct: 788 AVQQSQQRHQHAAQMIYGHQQSHHG--LHINSSPSSVQ 823
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 22.6 bits (46), Expect = 4.8
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -1
Query: 308 GSCCWPRPKCSPATT 264
GSC WPR K TT
Sbjct: 140 GSCYWPRGKNLGGTT 154
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 22.2 bits (45), Expect = 6.4
Identities = 9/27 (33%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +2
Query: 254 VPSLL*RV-NTSVWASSSSLGTDWRCS 331
+P + RV +T+VW + + G + RC+
Sbjct: 80 IPLYVCRVLHTTVWVAGAQRGNEQRCT 106
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.8 bits (44), Expect = 8.5
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3
Query: 564 LTYPESEYGGENSVRVS 514
L + ESEYGG +R++
Sbjct: 48 LQWNESEYGGVKDLRIT 64
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.8 bits (44), Expect = 8.5
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3
Query: 564 LTYPESEYGGENSVRVS 514
L + ESEYGG +R++
Sbjct: 48 LQWNESEYGGVKDLRIT 64
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.8 bits (44), Expect = 8.5
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3
Query: 564 LTYPESEYGGENSVRVS 514
L + ESEYGG +R++
Sbjct: 48 LQWNESEYGGVKDLRIT 64
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.8 bits (44), Expect = 8.5
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3
Query: 564 LTYPESEYGGENSVRVS 514
L + ESEYGG +R++
Sbjct: 48 LQWNESEYGGVKDLRIT 64
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.8 bits (44), Expect = 8.5
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3
Query: 564 LTYPESEYGGENSVRVS 514
L + ESEYGG +R++
Sbjct: 48 LQWNESEYGGVKDLRIT 64
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.8 bits (44), Expect = 8.5
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3
Query: 564 LTYPESEYGGENSVRVS 514
L + ESEYGG +R++
Sbjct: 48 LQWNESEYGGVKDLRIT 64
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 8.5
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3
Query: 564 LTYPESEYGGENSVRVS 514
L + ESEYGG +R++
Sbjct: 116 LQWNESEYGGVKDLRIT 132
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 8.5
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3
Query: 564 LTYPESEYGGENSVRVS 514
L + ESEYGG +R++
Sbjct: 116 LQWNESEYGGVKDLRIT 132
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,040
Number of Sequences: 438
Number of extensions: 3907
Number of successful extensions: 19
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28159464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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