Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_T7_D15
         (796 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0302 - 2286171-2286341,2286747-2286968                           29   4.3  
09_04_0737 - 19822822-19822973,19823069-19823135,19823666-198238...    29   5.6  
02_05_0640 - 30558523-30559027,30559123-30559252,30559388-305598...    29   5.6  
12_01_0425 + 3347804-3348284,3348544-3348759,3349038-3349588,334...    28   9.8  
12_01_0423 + 3337401-3337419,3337777-3338235,3338650-3338735,333...    28   9.8  
02_02_0718 - 13290764-13290897,13292375-13293041,13293364-132937...    28   9.8  
02_01_0121 + 890391-890429,890565-890730,891209-891769,892365-89...    28   9.8  

>12_01_0302 - 2286171-2286341,2286747-2286968
          Length = 130

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +2

Query: 80  RLQRSRKKHGEDLPTGGRSRRKGEKLE*MQREEQ 181
           RL+R RK +  D+   G  + +GEKLE  + +E+
Sbjct: 57  RLERLRKGYARDVRAAGAMKVRGEKLENWREKEK 90


>09_04_0737 -
           19822822-19822973,19823069-19823135,19823666-19823822,
           19824003-19824177,19824364-19824481,19824676-19824874,
           19824983-19825062,19825141-19825257,19825791-19825961,
           19826121-19826597
          Length = 570

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = +3

Query: 72  FYVDSKGVGRNMARIYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVVV 218
           F+VD  G G +  ++++LAV+ G R      CR     VV     DVVV
Sbjct: 93  FHVDPTGDGSSFLQLHRLAVE-GTRRLLAACCRSGVRTVVYTGSADVVV 140


>02_05_0640 - 30558523-30559027,30559123-30559252,30559388-30559868,
            30560292-30560346,30560537-30560613,30561228-30561315,
            30561490-30561593,30562050-30562231,30562347-30563109,
            30563195-30563438,30564513-30564658,30565158-30565283,
            30565404-30565517,30565595-30565762,30566283-30566528,
            30566605-30566767,30566970-30567064,30567274-30567357,
            30567769-30568055,30568359-30568572,30568923-30569140,
            30569386-30569623,30570312-30571118,30571202-30571301,
            30571694-30571737,30571824-30571973
          Length = 1942

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 20/65 (30%), Positives = 30/65 (46%)
 Frame = -3

Query: 239  PPFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLVDPRHVSSDSFGVYVKS*SL 60
            P F T+LY     ++KD      S+     L S+  Y  L+DP   S D+    + +   
Sbjct: 1349 PEFHTLLYAEAARIIKDCWWLADSSRPVKELDSAVGYA-LLDPTWASQDNTSTAIGNIVA 1407

Query: 59   ILHSF 45
            +LHSF
Sbjct: 1408 LLHSF 1412


>12_01_0425 +
           3347804-3348284,3348544-3348759,3349038-3349588,
           3349752-3349815,3349915-3349975,3350271-3350409,
           3350561-3350677,3350794-3350971,3351218-3351828
          Length = 805

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +2

Query: 518 SDEGVRYADGASDDNGGFNPARTPSXTAS 604
           S E +R+ D    D GG NP+ TP+ T S
Sbjct: 218 SHEELRWEDYQRGDKGGPNPSGTPAATPS 246


>12_01_0423 +
           3337401-3337419,3337777-3338235,3338650-3338735,
           3338974-3339022,3339225-3339533,3339555-3339710,
           3339871-3340086,3340404-3340906,3341050-3341116,
           3341215-3341272,3341561-3341699,3341840-3341956,
           3342069-3342246,3342459-3343093
          Length = 996

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +2

Query: 518 SDEGVRYADGASDDNGGFNPARTPSXTAS 604
           S E +R+ D    D GG NP+ TP+ T S
Sbjct: 417 SHEELRWQDYQRGDKGGPNPSGTPAVTPS 445


>02_02_0718 -
           13290764-13290897,13292375-13293041,13293364-13293719,
           13294559-13294629,13295326-13295336
          Length = 412

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -3

Query: 440 IPRILRSPPPTHPLIEDVVMATNQAIIDYK 351
           +P++L+SPP T+  IED    +  + ID K
Sbjct: 382 LPQLLQSPPETYHAIEDGHNPSKTSFIDMK 411


>02_01_0121 +
           890391-890429,890565-890730,891209-891769,892365-892845,
           892952-893033,893818-894021
          Length = 510

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -2

Query: 627 NIHFHQSPDAVXEGVRAGLKPPLSSEAPSAY 535
           N  FH+   A    V A + PP S  APS +
Sbjct: 127 NFEFHKERGASARSVTAAIVPPFSKPAPSKW 157


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,635,073
Number of Sequences: 37544
Number of extensions: 423083
Number of successful extensions: 1114
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1080
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1111
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2150667972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)